mRNA_M-pyrifera_M_contig84347.19670.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84347.19670.1
Unique NamemRNA_M-pyrifera_M_contig84347.19670.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: A0A7S4IJ08_9EUKA (Dynein light intermediate chain (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IJ08_9EUKA)

HSP 1 Score: 134 bits (336), Expect = 1.530e-36
Identity = 72/159 (45.28%), Postives = 100/159 (62.89%), Query Frame = 1 
Query:    4 HKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 480
            H  LL+F+LNA+N+HKS ++ITLD+SKPW L  +L  WL  V++H+K L++       L+ K  +R+  Y EPEAGAKKK   I L A  +A +    D+      P I  E  L  NLG+P+VV CCK D +  L R+F  +D  F+++QQHLR+ICL
Sbjct:   38 HDSLLRFALNAENIHKSVILITLDFSKPWDLSHTLEAWLETVSNHIKGLRLTSKVLAPLRNKLIKRYHEYTEPEAGAKKKRRVIDLTASSSAVE---TDEEI----PTIEDENALTQNLGIPIVVACCKTDFVGTLERNFHFRDDEFEFIQQHLRKICL 189
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BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: D3B0Y6_POLPP (Dynein light intermediate chain n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B0Y6_POLPP)

HSP 1 Score: 112 bits (280), Expect = 3.650e-26
Identity = 64/159 (40.25%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:    4 HKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 480
            H +LLKF+L A N+ +S +VI LD+S+PW + +SL +WL ++  H+KS+     K + LK K   ++  Y EP        +S S          P  D +      P L E +L  NLGLP++VVCCK D++  L + F  KD  FDY+QQ+LRRICL
Sbjct:   99 HNDLLKFALTANNIAQSMIVIALDFSQPWNIVDSLKKWLAILETHIKSITPQNEKRESLKDKVLIKWHQYVEPAQPNSSSILSASQKKKRKQVVTPIEDTSVL----PPLSENILISNLGLPILVVCCKSDSVVMLEKDFDYKDELFDYIQQYLRRICL 253
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BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: A0A670YNG2_PSETE (Dynein light intermediate chain n=3 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670YNG2_PSETE)

HSP 1 Score: 107 bits (266), Expect = 4.900e-25
Identity = 61/160 (38.12%), Postives = 92/160 (57.50%), Query Frame = 1 
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 480
            +HK LLKF++ A++L ++ V+   D S+PW + ESL +W  V+ +H+  L++ P +   ++ +  + FQ Y EPE G          +       GP+  D    A P  LGE VL  NLG+PVVVVC K DAM+ L +    ++ HFD++Q H+RR CL
Sbjct:  110 YHKGLLKFAVTAESLQETLVIFVADMSRPWTILESLQKWASVLREHIDKLKIPPEEMRNMEQQFVKIFQEYVEPEGG----------YQGSPQRRGPSGQDEENIALP--LGENVLTHNLGIPVVVVCTKCDAMSVLEKEHDYREEHFDFIQSHIRRFCL 257
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BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: C3XTX4_BRAFL (Dynein light intermediate chain n=5 Tax=Branchiostoma TaxID=7737 RepID=C3XTX4_BRAFL)

HSP 1 Score: 108 bits (271), Expect = 8.670e-25
Identity = 59/162 (36.42%), Postives = 96/162 (59.26%), Query Frame = 1 
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICLTC 486
            HH+ LL+F+L+A+N+  + V++ +D S+PW + ESL +W  ++  H+  L++ P K   L+ +  +++Q Y EPE GA+      S   P+A   G   ++         LGE VL  NLG+PVVVV  K DA++ L +    ++ H D++QQH+R+ CL C
Sbjct:  104 HHRGLLRFALSAENIEHTLVMLAVDMSRPWTILESLQKWADIIHHHIDRLKVPPEKMKELEEQLVRQYQEYVEPEEGAQ------SPQRPKAMTPGAGEEETVVLP----LGEDVLTHNLGVPVVVVVTKTDAISTLEKEHDYREEHLDFIQQHIRKFCLRC 255
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BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: L5LI04_MYODS (Dynein light intermediate chain (Fragment) n=2 Tax=Laurasiatheria TaxID=314145 RepID=L5LI04_MYODS)

HSP 1 Score: 107 bits (266), Expect = 1.790e-24
Identity = 61/162 (37.65%), Postives = 95/162 (58.64%), Query Frame = 1 
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICLTC 486
            +HK LLKF+++A++L ++ V+   D S+PW + ESL +W  V+ +H+  +++ P +   L+ K  + FQ Y EPE G +         +P+      +  D    A P  LG+ VL  NLG+PV+VVC K DA++ L +    +D HFD++Q HLRR CL C
Sbjct:   57 YHKGLLKFAVSAESLPETLVIFVADMSRPWAVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQ--------GSPQRRGPLTSGPDEENVALP--LGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRRFCLQC 208
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BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: UPI0006448ADE (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006448ADE)

HSP 1 Score: 107 bits (268), Expect = 2.080e-24
Identity = 67/168 (39.88%), Postives = 96/168 (57.14%), Query Frame = 1 
Query:    4 HKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSL-----QMLPSKTDLLKAKTQQRFQAYKE----PEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 480
            H +LLKF+L   N+  S +VITLD+S+PW + +SL +WL +V  H+KS+     Q++    D L  K  Q  +  +     P   A+KK     +HAP         +D +     P LGE +L  NLG+PV+VVCCK D++  L + F  KD  FDY+QQ+LRRIC+
Sbjct:   99 HHDLLKFALTPDNIAHSMIVITLDFSQPWNIVDSLKKWLGIVESHIKSIGSSQKQLMKGLDDKLMIKWHQYVEPPQNSAAAPLTNAQKKKKRKVVHAP--------IEDISVL---PPLGEDILSHNLGVPVLVVCCKSDSVVMLEKDFDYKDDLFDYIQQYLRRICI 255
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BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: B4E2E0_HUMAN (Dynein light intermediate chain n=46 Tax=Boreoeutheria TaxID=1437010 RepID=B4E2E0_HUMAN)

HSP 1 Score: 103 bits (258), Expect = 3.960e-24
Identity = 60/160 (37.50%), Postives = 93/160 (58.13%), Query Frame = 1 
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 480
            +HK LLKF+++A++L ++ V+   D S+PW + ESL +W  V+ +H+  +++ P K   L+ K  + FQ Y EPE G +         +P+      +  D    A P  LG+ VL  NLG+PV+VVC K DA++ L +    +D H D++Q HLRR CL
Sbjct:   75 YHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQ--------GSPQRRGPLTSGSDEENVALP--LGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCL 224
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BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: A0A7J7SHU8_RHIFE (Dynein light intermediate chain n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=A0A7J7SHU8_RHIFE)

HSP 1 Score: 105 bits (263), Expect = 4.220e-24
Identity = 61/160 (38.12%), Postives = 95/160 (59.38%), Query Frame = 1 
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 480
            +HK LLKF+++A++L ++ V+   D S+PW + ESL +W  V+ +H+  +++ P +   L+ K  + FQ Y EPE G +    S     P   + GP  ++ A       LG+ VL  NLG+PV+VVC K DA++ L +    +D HFD++Q HLRR CL
Sbjct:  114 YHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRALERKFVKEFQDYVEPEEGCQ---GSPQRRGP--LSSGPDEENVALP-----LGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRRFCL 263
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BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: UPI0003D6EB8D (cytoplasmic dynein 1 light intermediate chain 2 isoform X4 n=3 Tax=Murinae TaxID=39107 RepID=UPI0003D6EB8D)

HSP 1 Score: 105 bits (263), Expect = 4.640e-24
Identity = 60/160 (37.50%), Postives = 94/160 (58.75%), Query Frame = 1 
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 480
            +HK LLKF+++A++L ++ V+   D S+PW + ESL +W  V+ +H+  +++ P +   L+ K  + FQ Y EPE G +         +P+      +  D  + A P  LG+ VL  NLG+PV+VVC K DAM+ L +    +D H D++Q HLRR CL
Sbjct:  114 YHKGLLKFAVSAESLRETLVIFVADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQ--------GSPQRRGPLTSGSDEDSVALP--LGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQAHLRRFCL 263
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BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Match: A0A851M211_CORCR (Dynein light intermediate chain (Fragment) n=1 Tax=Corythaeola cristata TaxID=103954 RepID=A0A851M211_CORCR)

HSP 1 Score: 102 bits (253), Expect = 5.220e-24
Identity = 58/160 (36.25%), Postives = 93/160 (58.13%), Query Frame = 1 
Query:    1 HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSLQMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAADDAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDYVQQHLRRICL 480
            +HK LLKF+++A++L  + VV   D S+PW + ESL +W  V+ +H+  +++ P +   ++ K  + FQ Y EPE G +         +P+  A     D+  +      LGE VL  NLG+PV+VVC K DA++ L +    ++ HFD++Q H+RR CL
Sbjct:   57 YHKGLLKFAVSAESLQDTIVVFVADMSRPWTVMESLQKWASVLQEHIDKMKIPPEEMRDMEQKFIKEFQEYVEPEEGYQ--------GSPQRRATSAQEDEHVSLP----LGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHIRRFCL 204
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84347.19670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4IJ08_9EUKA1.530e-3645.28Dynein light intermediate chain (Fragment) n=1 Tax... [more]
D3B0Y6_POLPP3.650e-2640.25Dynein light intermediate chain n=1 Tax=Polysphond... [more]
A0A670YNG2_PSETE4.900e-2538.13Dynein light intermediate chain n=3 Tax=Pseudonaja... [more]
C3XTX4_BRAFL8.670e-2536.42Dynein light intermediate chain n=5 Tax=Branchiost... [more]
L5LI04_MYODS1.790e-2437.65Dynein light intermediate chain (Fragment) n=2 Tax... [more]
UPI0006448ADE2.080e-2439.88hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
B4E2E0_HUMAN3.960e-2437.50Dynein light intermediate chain n=46 Tax=Boreoeuth... [more]
A0A7J7SHU8_RHIFE4.220e-2438.13Dynein light intermediate chain n=1 Tax=Rhinolophu... [more]
UPI0003D6EB8D4.640e-2437.50cytoplasmic dynein 1 light intermediate chain 2 is... [more]
A0A851M211_CORCR5.220e-2436.25Dynein light intermediate chain (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84347contigM-pyrifera_M_contig84347:174..829 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score110.9
Seed ortholog evalue5.5e-22
Seed eggNOG ortholog7739.XP_002612339.1
Preferred nameDYNC1LI1
KEGG koko:K10416
KEGG Pathwayko04145,ko04962,ko05132,map04145,map04962,map05132
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000226,GO:0000278,GO:0000775,GO:0000776,GO:0000902,GO:0000904,GO:0000922,GO:0001775,GO:0001882,GO:0001883,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0003006,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005868,GO:0005874,GO:0005875,GO:0005886,GO:0006403,GO:0006810,GO:0006887,GO:0006888,GO:0006928,GO:0006955,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007088,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007399,GO:0007409,GO:0008088,GO:0008090,GO:0008150,GO:0009653,GO:0009719,GO:0009987,GO:0010033,GO:0010564,GO:0010769,GO:0010965,GO:0010970,GO:0010975,GO:0012505,GO:0012506,GO:0015630,GO:0015931,GO:0016020,GO:0016043,GO:0016192,GO:0016358,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019882,GO:0019884,GO:0019886,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0030030,GO:0030071,GO:0030141,GO:0030154,GO:0030182,GO:0030286,GO:0030659,GO:0030667,GO:0030705,GO:0031090,GO:0031175,GO:0031344,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032886,GO:0032940,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0035371,GO:0036094,GO:0036230,GO:0042119,GO:0042221,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045321,GO:0045504,GO:0045595,GO:0045664,GO:0045787,GO:0045931,GO:0046605,GO:0046903,GO:0046907,GO:0048002,GO:0048193,GO:0048468,GO:0048477,GO:0048518,GO:0048522,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048814,GO:0048856,GO:0048858,GO:0048869,GO:0050657,GO:0050658,GO:0050767,GO:0050773,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051028,GO:0051128,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051259,GO:0051260,GO:0051493,GO:0051640,GO:0051641,GO:0051642,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051960,GO:0051983,GO:0060284,GO:0061564,GO:0061842,GO:0065003,GO:0065007,GO:0070507,GO:0070820,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090068,GO:0090231,GO:0090232,GO:0090266,GO:0090267,GO:0097159,GO:0097367,GO:0097458,GO:0097708,GO:0098588,GO:0098687,GO:0098805,GO:0098930,GO:0099080,GO:0099081,GO:0099111,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0101003,GO:0120025,GO:0120035,GO:0120036,GO:0120039,GO:1901265,GO:1901363,GO:1901976,GO:1901978,GO:1901987,GO:1901990,GO:1902099,GO:1902494,GO:1902850,GO:1903047,GO:1903504,GO:1905818,GO:1990089,GO:1990090,GO:1990752,GO:2000026
EggNOG free text desc.dynein heavy chain binding
EggNOG OGs38EM3@33154,3BFMD@33208,3CU3J@33213,4863R@7711,KOG3905@1,KOG3905@2759
COG Functional cat.N
Best tax levelChordata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04131,ko04812
Exons2
Model size486
Cds size486
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816750.885482-CDS-M-pyrifera_M_contig84347:173..4691622816750.885482-CDS-M-pyrifera_M_contig84347:173..469Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84347 174..469 -
1692278156.592799-CDS-M-pyrifera_M_contig84347:173..4691692278156.592799-CDS-M-pyrifera_M_contig84347:173..469Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84347 174..469 -
1622816750.8993855-CDS-M-pyrifera_M_contig84347:639..8291622816750.8993855-CDS-M-pyrifera_M_contig84347:639..829Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84347 640..829 -
1692278156.6103227-CDS-M-pyrifera_M_contig84347:639..8291692278156.6103227-CDS-M-pyrifera_M_contig84347:639..829Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84347 640..829 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84347.19670.1prot_M-pyrifera_M_contig84347.19670.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84347 174..829 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84347.19670.1

>prot_M-pyrifera_M_contig84347.19670.1 ID=prot_M-pyrifera_M_contig84347.19670.1|Name=mRNA_M-pyrifera_M_contig84347.19670.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
HHKELLKFSLNAKNLHKSAVVITLDYSKPWLLEESLTRWLRVVTDHVKSL
QMLPSKTDLLKAKTQQRFQAYKEPEAGAKKKAMSISLHAPEAAADGPAAD
DAAAAAEPPILGEGVLDVNLGLPVVVVCCKVDAMAALVRSFGLKDGHFDY
VQQHLRRICLTC
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mRNA from alignment at M-pyrifera_M_contig84347:174..829-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84347.19670.1 ID=mRNA_M-pyrifera_M_contig84347.19670.1|Name=mRNA_M-pyrifera_M_contig84347.19670.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=656bp|location=Sequence derived from alignment at M-pyrifera_M_contig84347:174..829- (Macrocystis pyrifera P11B4 male)
CACCACAAGGAGCTGCTCAAGTTCTCGCTGAACGCCAAGAACCTCCACAA
GTCGGCCGTGGTGATCACGCTGGACTACTCCAAGCCCTGGCTGCTGGAGG
AGAGCCTCACCCGCTGGCTCCGCGTCGTGACGGACCATGTGAAGAGCCTA
CAGATGCTGCCCAGCAAGACGGACCTCCTCAAGGCTAAGAGTGCGACTCC
CGCCCCCTGTACACAGAAAGGAAGGAACAGAGGAAAGGGAGGAGAGGGCG
GCTTGGAGTATGCGCAAGTTAGAGAGTGTGCGTGAGAGTGAGTTAGGTAG
AGAGAGAGGAGGAGGGTGGAGCCACACGGAGCTTGGGGGCTGTCCTGACG
GAAGGTGCAGCGCAGCAGCGGTTCCAGGCGTACAAGGAGCCGGAGGCGGG
CGCCAAGAAGAAGGCTATGTCCATTTCCCTCCACGCTCCCGAGGCTGCGG
CCGACGGCCCCGCGGCAGACGACGCGGCGGCGGCGGCAGAGCCCCCGATC
CTGGGCGAGGGAGTGCTCGACGTCAACCTCGGCCTCCCCGTCGTCGTCGT
CTGCTGCAAAGTCGACGCTATGGCCGCACTCGTGCGCAGTTTCGGCCTCA
AGGACGGCCACTTCGACTACGTCCAGCAGCACCTCCGCCGCATCTGCCTC
ACCTGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84347:174..829-

>mRNA_M-pyrifera_M_contig84347.19670.1 ID=mRNA_M-pyrifera_M_contig84347.19670.1|Name=mRNA_M-pyrifera_M_contig84347.19670.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig84347:174..829- (Macrocystis pyrifera P11B4 male)
CACCACAAGGAGCTGCTCAAGTTCTCGCTGAACGCCAAGAACCTCCACAA
GTCGGCCGTGGTGATCACGCTGGACTACTCCAAGCCCTGGCTGCTGGAGG
AGAGCCTCACCCGCTGGCTCCGCGTCGTGACGGACCATGTGAAGAGCCTA
CAGATGCTGCCCAGCAAGACGGACCTCCTCAAGGCTAAGACACCACAAGG
AGCTGCTCAAGTTCTCGCTGAACGCCAAGAACCTCCACAAGTCGGCCGTG
GTGATCACGCTGGACTACTCCAAGCCCTGGCTGCTGGAGGAGAGCCTCAC
CCGCTGGCTCCGCGTCGTGACGGACCATGTGAAGAGCCTACAGATGCTGC
CCAGCAAGACGGACCTCCTCAAGGCTAAGACGCAGCAGCGGTTCCAGGCG
TACAAGGAGCCGGAGGCGGGCGCCAAGAAGAAGGCTATGTCCATTTCCCT
CCACGCTCCCGAGGCTGCGGCCGACGGCCCCGCGGCAGACGACGCGGCGG
CGGCGGCAGAGCCCCCGATCCTGGGCGAGGGAGTGCTCGACGTCAACCTC
GGCCTCCCCGTCGTCGTCGTCTGCTGCAAAGTCGACGCTATGGCCGCACT
CGTGCGCAGTTTCGGCCTCAAGGACGGCCACTTCGACTACGTCCAGCAGC
ACCTCCGCCGCATCTGCCTCACCTGTCGCAGCAGCGGTTCCAGGCGTACA
AGGAGCCGGAGGCGGGCGCCAAGAAGAAGGCTATGTCCATTTCCCTCCAC
GCTCCCGAGGCTGCGGCCGACGGCCCCGCGGCAGACGACGCGGCGGCGGC
GGCAGAGCCCCCGATCCTGGGCGAGGGAGTGCTCGACGTCAACCTCGGCC
TCCCCGTCGTCGTCGTCTGCTGCAAAGTCGACGCTATGGCCGCACTCGTG
CGCAGTTTCGGCCTCAAGGACGGCCACTTCGACTACGTCCAGCAGCACCT
CCGCCGCATCTGCCTCACCTGT
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