prot_M-pyrifera_M_contig84236.19650.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig84236.19650.1
Unique Nameprot_M-pyrifera_M_contig84236.19650.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length144
Homology
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: D7G3V5_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3V5_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 8.250e-12
Identity = 52/141 (36.88%), Postives = 68/141 (48.23%), Query Frame = 0
Query:    1 CPLADDGLSRLGTLLDDRLAAQPEARGDLERLLGRWFGMLGTERGGPLVLVFFGVTGTGKTMSAGLVAEALLEGREAAHGAKHGAPRGFLELEGSMFGSGEDVGR----MRQAVVQHGRECGRGGVILVDEAQKVPLPTLD 137
            CP ADD +      L D + AQP A   L+  L  W     ++R  PLV+   G TGTGKT +A ++A+ALL  R    G     PRG L L G+ +     V      +R+ + Q    CG   V+L DE QK    TLD
Sbjct:   57 CPFADDPVEAARRALQDGILAQPLALESLDGALSSWHYSRQSDRYEPLVVALTGSTGTGKTETAWVLADALLTKRCRITGGTRDIPRGLLVLNGADYMVAAKVEEYQSLIRRKLGQRLEYCGGNVVVLFDELQKAAPGTLD 197          
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: A0A5A8CNV9_CAFRO (AAA domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CNV9_CAFRO)

HSP 1 Score: 71.6 bits (174), Expect = 8.420e-12
Identity = 55/152 (36.18%), Postives = 71/152 (46.71%), Query Frame = 0
Query:    1 CPLADDGLSRLGTLLDDRLAAQPEARGDLERLLGRWF------GMLGTERGGPLVLVFFGVTGTGKTMSAGLVAEALLEGR-EAAHGAKHGAPRGFLELEGSMF--GSGEDVGRMRQAVVQHGRECGRGGVILVDEAQKVPLPTLDRVLSLL 143
            CP   D    L  LL++R+  Q  A   L   + RW       G  G   GGP+VL   GVTG+GKT +AGLVA +LLE      H +    P G L+L G +F    G     +RQ V      C   GV++ DE QK     +  VL L+
Sbjct:   46 CPWRKDAGQELHRLLNNRIGGQIGAVEQLVDAVERWTVSVQSAGSGGRPAGGPMVLFLSGVTGSGKTTAAGLVARSLLEASVPPQHRSDPLVPEGLLQLNGEVFTEAGGGTPESLRQQVAALAARCSGRGVVVFDEFQKADPSAVSAVLELI 197          
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: A0A7S2V512_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V512_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.440e-6
Identity = 44/150 (29.33%), Postives = 68/150 (45.33%), Query Frame = 0
Query:    1 CPLADDGLSRLGTLLDDRLAAQPEARGDLERLLGRWFGMLGTERGG--PLVLVFFGVTGTGKTMSAGLVAEALLEGRE-AAHGAKHGAPRGFLELEGSMFGSGEDVG------RMRQAVVQHGRECGRGGVILVDEAQKVPLPTLDRVLS 141
            CP  +  +  +  LL  R+  Q +A+  +      W   +G ++    PLV+   G TG GKT +A ++AEALL+ RE  +       P G +   G  F   E          ++  +V H R C    V+L DE QK+   TLD ++ 
Sbjct:  164 CPYVEAPIEAVQGLLPQRIKGQEKAQQAILSAFQYW--EMGRKQASQQPLVIAITGPTGVGKTETAHVLAEALLQKREKVSETGDRTRPAGLIIFRGEDFSDAEGAPLAQYHTEIKSRLVNHLRHCAGNAVVLFDEVQKIIPGTLDVIME 311          
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: A0A6A3TT52_9STRA (AAA domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TT52_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.620e-5
Identity = 42/144 (29.17%), Postives = 63/144 (43.75%), Query Frame = 0
Query:    1 CPLADDGLSRLGTLLDDRLAAQPEARGDLERLLGRW-FGMLGTERGGPLVLVFFGVTGTGKTMSAGLVAEALLEGREAAHGAKHGAPRGFLELEGSMFGSG------EDVGRMRQAVVQHGRECGRGGVILVDEAQKVPLPTLD 137
            C   D     + + L   L  Q  A   +   +  W F    T+   PLVL   G TGTGKT ++ L+AEAL + ++    ++   P G L   G  F         E   +++  + +H   C    V+++DE QKV   TLD
Sbjct:   45 CTFVDKPSQVVRSHLQQNLKGQERAVEAVVGAIEAWEFSRTSTKDRAPLVLAITGPTGTGKTETSNLIAEALFKRKKKLPNSEKRVPSGLLIFRGEDFSDNFTNPITEYHTQIKTRLAEHLHHCSGKAVVVMDEVQKVIPHTLD 188          
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: A0A1V9YTU9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTU9_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 4.960e-5
Identity = 43/136 (31.62%), Postives = 62/136 (45.59%), Query Frame = 0
Query:   14 LLDDRLAAQPEARGDLERLLGRWFGMLGTERGGPLVLVFFGVTGTGKTMSAGLVAEALLEGREAAHGAKHGAPRGFLELEGSMFGSGEDVGRMRQAVVQHG---------RECGRGGVILVDEAQKVPLPTLDRVL 140
            +L++ L  Q  A+  +   L  W      +   P+VL F G+TGTGKTM+A L+A+AL   RE    +    P G L   G+ F   ED         Q           ++C    V++ DE QKV +P +  VL
Sbjct:   18 ILNEHLVGQDRAKEIIVNELKLWHPYDNKQVHQPMVLAFTGLTGTGKTMTATLIADALFNQREKLENSDKTQPAGLLMYSGADF---EDTATSTIKEFQENFKTRLGSQLQKCSGVAVVVFDEIQKV-IPQVVNVL 149          
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: A0A1W0A1S8_9STRA (AAA domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1S8_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 5.220e-5
Identity = 34/97 (35.05%), Postives = 47/97 (48.45%), Query Frame = 0
Query:   47 PLVLVFFGVTGTGKTMSAGLVAEALLEGREAAHGAKHGAPRGFLELEGSMFGS------GEDVGRMRQAVVQHGRECGRGGVILVDEAQKVPLPTLD 137
            P+VL   G TGTGKT +A L+AEAL + R     +    P G +   G  F         E   +++  +V+H   C    V++ DE QKV   TLD
Sbjct:   86 PMVLAITGPTGTGKTKTATLIAEALFQRRRKLENSIKYEPTGLIVFSGQDFNDVTKNPVTEHQEQIKSRLVEHLSTCSGKAVVVFDEVQKVVPQTLD 182          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G3V5_ECTSI8.250e-1236.88AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A5A8CNV9_CAFRO8.420e-1236.18AAA domain-containing protein n=5 Tax=Cafeteria ro... [more]
A0A7S2V512_9STRA1.440e-629.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6A3TT52_9STRA1.620e-529.17AAA domain-containing protein n=2 Tax=Phytophthora... [more]
A0A1V9YTU9_9STRA4.960e-531.62Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1W0A1S8_9STRA5.220e-535.05AAA domain-containing protein n=1 Tax=Thraustothec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainPFAMPF13401AAA_22coord: 47..138
e-value: 4.2E-6
score: 27.1
NoneNo IPR availableGENE3D3.40.50.300coord: 17..143
e-value: 4.0E-9
score: 38.4
IPR010448TorsinPANTHERPTHR10760TORSINcoord: 7..143
IPR030553Torsin-like proteinPANTHERPTHR10760:SF2TORSIN-LIKE PROTEINcoord: 7..143
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84236contigM-pyrifera_M_contig84236:330..761 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84236.19650.1mRNA_M-pyrifera_M_contig84236.19650.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig84236 330..761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig84236.19650.1 ID=prot_M-pyrifera_M_contig84236.19650.1|Name=mRNA_M-pyrifera_M_contig84236.19650.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
CPLADDGLSRLGTLLDDRLAAQPEARGDLERLLGRWFGMLGTERGGPLVL
VFFGVTGTGKTMSAGLVAEALLEGREAAHGAKHGAPRGFLELEGSMFGSG
EDVGRMRQAVVQHGRECGRGGVILVDEAQKVPLPTLDRVLSLLF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR010448Torsin
IPR030553Torsin-like
IPR027417P-loop_NTPase