mRNA_M-pyrifera_M_contig84236.19650.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: D7G3V5_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3V5_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 8.250e-12 Identity = 52/141 (36.88%), Postives = 68/141 (48.23%), Query Frame = 1 Query: 1 CPLADDGLSRLGTLLDDRLAAQPEARGDLERLLGRWFGMLGTERGGPLVLVFFGVTGTGKTMSAGLVAEALLEGREAAHGAKHGAPRGFLELEGSMFGSGEDVGR----MRQAVVQHGRECGRGGVILVDEAQKVPLPTLD 411 CP ADD + L D + AQP A L+ L W ++R PLV+ G TGTGKT +A ++A+ALL R G PRG L L G+ + V +R+ + Q CG V+L DE QK TLD Sbjct: 57 CPFADDPVEAARRALQDGILAQPLALESLDGALSSWHYSRQSDRYEPLVVALTGSTGTGKTETAWVLADALLTKRCRITGGTRDIPRGLLVLNGADYMVAAKVEEYQSLIRRKLGQRLEYCGGNVVVLFDELQKAAPGTLD 197
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: A0A5A8CNV9_CAFRO (AAA domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CNV9_CAFRO) HSP 1 Score: 71.6 bits (174), Expect = 8.420e-12 Identity = 55/152 (36.18%), Postives = 71/152 (46.71%), Query Frame = 1 Query: 1 CPLADDGLSRLGTLLDDRLAAQPEARGDLERLLGRWF------GMLGTERGGPLVLVFFGVTGTGKTMSAGLVAEALLEGR-EAAHGAKHGAPRGFLELEGSMF--GSGEDVGRMRQAVVQHGRECGRGGVILVDEAQKVPLPTLDRVLSLL 429 CP D L LL++R+ Q A L + RW G G GGP+VL GVTG+GKT +AGLVA +LLE H + P G L+L G +F G +RQ V C GV++ DE QK + VL L+ Sbjct: 46 CPWRKDAGQELHRLLNNRIGGQIGAVEQLVDAVERWTVSVQSAGSGGRPAGGPMVLFLSGVTGSGKTTAAGLVARSLLEASVPPQHRSDPLVPEGLLQLNGEVFTEAGGGTPESLRQQVAALAARCSGRGVVVFDEFQKADPSAVSAVLELI 197
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: A0A7S2V512_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V512_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.440e-6 Identity = 44/150 (29.33%), Postives = 68/150 (45.33%), Query Frame = 1 Query: 1 CPLADDGLSRLGTLLDDRLAAQPEARGDLERLLGRWFGMLGTERGG--PLVLVFFGVTGTGKTMSAGLVAEALLEGRE-AAHGAKHGAPRGFLELEGSMFGSGEDVG------RMRQAVVQHGRECGRGGVILVDEAQKVPLPTLDRVLS 423 CP + + + LL R+ Q +A+ + W +G ++ PLV+ G TG GKT +A ++AEALL+ RE + P G + G F E ++ +V H R C V+L DE QK+ TLD ++ Sbjct: 164 CPYVEAPIEAVQGLLPQRIKGQEKAQQAILSAFQYW--EMGRKQASQQPLVIAITGPTGVGKTETAHVLAEALLQKREKVSETGDRTRPAGLIIFRGEDFSDAEGAPLAQYHTEIKSRLVNHLRHCAGNAVVLFDEVQKIIPGTLDVIME 311
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: A0A6A3TT52_9STRA (AAA domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TT52_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 1.620e-5 Identity = 42/144 (29.17%), Postives = 63/144 (43.75%), Query Frame = 1 Query: 1 CPLADDGLSRLGTLLDDRLAAQPEARGDLERLLGRW-FGMLGTERGGPLVLVFFGVTGTGKTMSAGLVAEALLEGREAAHGAKHGAPRGFLELEGSMFGSG------EDVGRMRQAVVQHGRECGRGGVILVDEAQKVPLPTLD 411 C D + + L L Q A + + W F T+ PLVL G TGTGKT ++ L+AEAL + ++ ++ P G L G F E +++ + +H C V+++DE QKV TLD Sbjct: 45 CTFVDKPSQVVRSHLQQNLKGQERAVEAVVGAIEAWEFSRTSTKDRAPLVLAITGPTGTGKTETSNLIAEALFKRKKKLPNSEKRVPSGLLIFRGEDFSDNFTNPITEYHTQIKTRLAEHLHHCSGKAVVVMDEVQKVIPHTLD 188
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: A0A1V9YTU9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTU9_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 4.960e-5 Identity = 43/136 (31.62%), Postives = 62/136 (45.59%), Query Frame = 1 Query: 40 LLDDRLAAQPEARGDLERLLGRWFGMLGTERGGPLVLVFFGVTGTGKTMSAGLVAEALLEGREAAHGAKHGAPRGFLELEGSMFGSGEDVGRMRQAVVQHG---------RECGRGGVILVDEAQKVPLPTLDRVL 420 +L++ L Q A+ + L W + P+VL F G+TGTGKTM+A L+A+AL RE + P G L G+ F ED Q ++C V++ DE QKV +P + VL Sbjct: 18 ILNEHLVGQDRAKEIIVNELKLWHPYDNKQVHQPMVLAFTGLTGTGKTMTATLIADALFNQREKLENSDKTQPAGLLMYSGADF---EDTATSTIKEFQENFKTRLGSQLQKCSGVAVVVFDEIQKV-IPQVVNVL 149
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Match: A0A1W0A1S8_9STRA (AAA domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1S8_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 5.220e-5 Identity = 34/97 (35.05%), Postives = 47/97 (48.45%), Query Frame = 1 Query: 139 PLVLVFFGVTGTGKTMSAGLVAEALLEGREAAHGAKHGAPRGFLELEGSMFGS------GEDVGRMRQAVVQHGRECGRGGVILVDEAQKVPLPTLD 411 P+VL G TGTGKT +A L+AEAL + R + P G + G F E +++ +V+H C V++ DE QKV TLD Sbjct: 86 PMVLAITGPTGTGKTKTATLIAEALFQRRRKLENSIKYEPTGLIVFSGQDFNDVTKNPVTEHQEQIKSRLVEHLSTCSGKAVVVFDEVQKVVPQTLD 182 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84236.19650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84236.19650.1 >prot_M-pyrifera_M_contig84236.19650.1 ID=prot_M-pyrifera_M_contig84236.19650.1|Name=mRNA_M-pyrifera_M_contig84236.19650.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp CPLADDGLSRLGTLLDDRLAAQPEARGDLERLLGRWFGMLGTERGGPLVLback to top mRNA from alignment at M-pyrifera_M_contig84236:330..761- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84236.19650.1 ID=mRNA_M-pyrifera_M_contig84236.19650.1|Name=mRNA_M-pyrifera_M_contig84236.19650.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig84236:330..761- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84236:330..761- >mRNA_M-pyrifera_M_contig84236.19650.1 ID=mRNA_M-pyrifera_M_contig84236.19650.1|Name=mRNA_M-pyrifera_M_contig84236.19650.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig84236:330..761- (Macrocystis pyrifera P11B4 male)back to top |