prot_M-pyrifera_M_contig84071.19617.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig84071.19617.1
Unique Nameprot_M-pyrifera_M_contig84071.19617.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length145
Homology
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BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A2E5X311_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X311_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 2.810e-6
Identity = 50/158 (31.65%), Postives = 71/158 (44.94%), Query Frame = 0 
Query:    2 KMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQAN--------VLTPRLRVETPG---VPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRG-EAERLGLMPGERITAVDGVPVLAEGDFARRMAAATGPVVLTVE--GSDAHRTVS 145
            K+ V   SPAA AG+  GD     E+  PG  +  A++ A              P     TPG   V      V +      ADG   +GV+     + A RG E   LG+  G+RIT+++G PVL   D    +    GP+++TV+  G D+  TVS
Sbjct:  218 KVIVEEGSPAALAGVASGDKWISTESGRPGDSIAEAVMAATGAGEPISATFERAPYADETTPGGTLVIGEQYAVTISPREGVADGTPLVGVITASDLVKATRGAEWSALGVQAGDRITSINGAPVLWIRDLEDALNGQAGPLLITVDRDGQDSVYTVS 375
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BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A2E6D9Y4_9BACT (RIP metalloprotease RseP n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2E6D9Y4_9BACT)

HSP 1 Score: 54.3 bits (129), Expect = 9.620e-6
Identity = 46/149 (30.87%), Postives = 70/149 (46.98%), Query Frame = 0 
Query:    2 KMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMR----ALIHAQA---NVLTPRLRVETPGVPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRGEA--ERLGLMPGERITAVDGVPVLAEGDFAR--RMAAATGPVVLTVEGSD 139
            ++ VAP+ PA KAG++DGD L  +  AP G   +R    AL   +A    +L     +E P VPDS            AD +   G+ P+   I  +R     +R+GL  G R+  V+G P+    D  +  R     GP+ + ++ SD
Sbjct:  217 RIQVAPDGPATKAGLMDGDTLVSISGAPAGLTPVRQMEWALERGEAIVVRILRQGQPLELPIVPDST----------PADQKL-FGIEPMQNLIKDLRPGPWIDRMGLKKGARLLEVNGQPIRRPTDLGKALRGTGEAGPLTVVIQPSD 354
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2E5X311_9BACT2.810e-631.65Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2E6D9Y4_9BACT9.620e-630.87RIP metalloprotease RseP n=2 Tax=cellular organism... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041489PDZ domain 6PFAMPF17820PDZ_6coord: 94..136
e-value: 6.5E-7
score: 29.1
NoneNo IPR availableGENE3D2.30.42.10coord: 87..144
e-value: 5.2E-7
score: 31.5
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 61..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84071contigM-pyrifera_M_contig84071:81..515 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84071.19617.1mRNA_M-pyrifera_M_contig84071.19617.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig84071 81..884 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig84071.19617.1 ID=prot_M-pyrifera_M_contig84071.19617.1|Name=mRNA_M-pyrifera_M_contig84071.19617.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
MKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQANVLTPRL
RVETPGVPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRGEAERLGL
MPGERITAVDGVPVLAEGDFARRMAAATGPVVLTVEGSDAHRTVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041489PDZ_6
IPR036034PDZ_sf