mRNA_M-pyrifera_M_contig84071.19617.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84071.19617.1
Unique NamemRNA_M-pyrifera_M_contig84071.19617.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A2E5X311_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X311_9BACT)

HSP 1 Score: 172 bits (436), Expect = 4.590e-46
Identity = 115/282 (40.78%), Postives = 157/282 (55.67%), Query Frame = 1
Query:    1 VGQRFLIFAGGVIMNIVFGLIVFPIVFFVGVPFEAPVIGATDPGSPA*QAGIEPGTTVLAIEGEEVRSFNDITTAIALGSAGPLELEVQEPGTEQPRSVFVEPAYNETLGLRLLGVRQALHADMKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQAN--------VLTPRLRVETPG---VPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRG-EAERLGLMPGERITAVDGVPVLAEGDFARRMAAATGPVVLTVE--GSDAHRTVS 804
            VGQRFLIF+GGVIMN+VFGL+VFPI+F+VGVPF  P++G   PG PA QAG+E GT VL + G++V +F +I   +ALG+    EL +Q PG+E   S+ V+P  + T GL  LG   AL  + K+ V   SPAA AG+  GD     E+  PG  +  A++ A              P     TPG   V      V +      ADG   +GV+     + A RG E   LG+  G+RIT+++G PVL   D    +    GP+++TV+  G D+  TVS
Sbjct:   94 VGQRFLIFSGGVIMNVVFGLVVFPILFWVGVPFTQPLVGNPTPGGPAWQAGLEDGTRVLEVNGQKVITFPEILNEVALGNPETCELLIQRPGSEVTESITVKPERSPTRGLFELGFPPALDPENKVIVEEGSPAALAGVASGDKWISTESGRPGDSIAEAVMAATGAGEPISATFERAPYADETTPGGTLVIGEQYAVTISPREGVADGTPLVGVITASDLVKATRGAEWSALGVQAGDRITSINGAPVLWIRDLEDALNGQAGPLLITVDRDGQDSVYTVS 375          
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A2D5W9U7_9BACT (RIP metalloprotease RseP n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W9U7_9BACT)

HSP 1 Score: 162 bits (409), Expect = 4.350e-42
Identity = 107/251 (42.63%), Postives = 140/251 (55.78%), Query Frame = 1
Query:    1 VGQRFLIFAGGVIMNIVFGLIVFPIVFFVGVPFEAPVIGATDPGSPA*QAGIEPGTTVLAIEGEEVRSFNDITTAIALGSAGPLELEVQEPGTEQPRSVFVEPAYNETLGLRLLGVRQALHADMKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQANVLTPRLRVETPGVPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRGEAER--LGLMPGERITAVDGVPVLAEGDFARRMAA 747
            V +RFLIF+GGVIMN++FG++VFPIV  VGVPF  PV+G + PGSPA QAG+ PGT VL++  + V  F  I   +ALG A    LE+ EP   +PR V V P Y+E  G   +GV        ++SVAP S AA AG+  GD L  V   PPG+ L  +L  AQ +     L VE+ G    LR V     P      + +G+    Q + A+R  A    LGL   +RI AV  +P+L  GD  R + A
Sbjct:   93 VSERFLIFSGGVIMNVIFGMLVFPIVLAVGVPFTEPVLGPSQPGSPAWQAGLAPGTRVLSVNDKSVFGFMHIPNEVALGPAEGTVLEIMEPAAVEPRRVTVVPIYSERTGTLSIGVTPPSDPLGQISVAPRSAAAAAGLRKGDRLLSVAGTPPGWPLESSLALAQRSGEPLDLIVESAGERRELRLVPTLGEPSEV---SLLGISRPVQLVSALRSNATLGDLGLRVDDRILAVGQLPILRRGDLHRALGA 340          
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A800G0Y5_9BACT (RIP metalloprotease RseP n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G0Y5_9BACT)

HSP 1 Score: 159 bits (401), Expect = 4.210e-41
Identity = 96/249 (38.55%), Postives = 137/249 (55.02%), Query Frame = 1
Query:    1 VGQRFLIFAGGVIMNIVFGLIVFPIVFFVGVPFEAPVIGATDPGSPA*QAGIEPGTTVLAIEGEEVRSFNDITTAIALGSAGPLELEVQEPGTEQPRSVFVEPAYNETLGLRLLGVRQALHADMKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMR----ALIHAQANVLTPRLRVETPGVPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRGEA--ERLGLMPGERITAVDGVPVLAEGDF 729
            VGQRF I++GGVIMN++F L+VFP+V   GVP   PV+ A  PG PA  AGI  GT +LA++GEEV  F  I   +AL  AGP++L V+ PG+E   ++ + P Y+   G + +GVR  +  +  + V P  PAA+AG++DGD L  +  AP G+  +R    A +  +A  +  R   E   +P   R    ER           G+ P+   I  +R  A  ER+GL  G R+  V+G P+   GD 
Sbjct:   93 VGQRFFIYSGGVIMNVIFALVVFPLVLAAGVPVLRPVVAAPTPGMPAWHAGIPAGTEILAVDGEEVYDFFHIPNEVALADAGPIQLTVRYPGSEALNTLPITPVYSANGGFKQIGVRPGVDPEHLVQVLPGGPAAEAGLMDGDTLLSISGAPAGFTPVRQMKWATLRGEAITVLVRRHGEEKEIPIVPRSTPAER--------RLFGIEPMQNLIKDLRPGAWVERMGLEKGARLVEVNGQPIRRPGDL 333          
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A2D6HER2_9BACT (RIP metalloprotease RseP n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HER2_9BACT)

HSP 1 Score: 158 bits (399), Expect = 7.660e-41
Identity = 107/269 (39.78%), Postives = 144/269 (53.53%), Query Frame = 1
Query:    1 VGQRFLIFAGGVIMNIVFGLIVFPIVFFVGVPFEAPVIGATDPGSPA*QAGIEPGTTVLAIEGEEVRSFNDITTAIALGSAGPLELEVQEPGTEQPRSVFVEPAYNETLGLRLLGVRQALHADMKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQANVLTP-RLRVETPGVP-DSLRWVELERGPPAADGRATIGVMPLHQEIVAVRGE--AERLGLMPGERITAVDGVPVLAEGDFARRMAAATGPVVLTVEGSDAHR 795
            VG RFLIF+GGVI N+VFGL+VFPI+F VGVPF +P++GA  PGSP   AG+  GT VLA+ G  V  F DI   +AL  +   ++EV EPG ++ R V + P Y   LG   +GV      +  +++ PESPAA+AG+  GD L  VE    G  L RA + A  +   P R R E  G P +++    LER      G    GV      ++ +R       L L P +R+ +V G P+L  GD    + A T    L VE   + R
Sbjct:   96 VGGRFLIFSGGVIANVVFGLLVFPILFAVGVPFHSPLLGAAPPGSPVWHAGLAEGTRVLAVNGSAVHDFTDIHLEVALSGSEQCDVEVLEPGADRSRVVRLTPEYEPLLGFSTIGVSSPADPEHHLAIQPESPAAEAGLRTGDRLLAVEGGLAGRSL-RAQVDAVLSRREPLRGRFERNGEPFEAVVQPHLERS-----GSPLFGVSTPFNHLLDLRATPLVTSLDLAPDDRLLSVAGRPILRHGDLLEALLANTAGARLAVERGASRR 358          
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A2E6D9Y4_9BACT (RIP metalloprotease RseP n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2E6D9Y4_9BACT)

HSP 1 Score: 156 bits (394), Expect = 4.090e-40
Identity = 100/273 (36.63%), Postives = 149/273 (54.58%), Query Frame = 1
Query:    1 VGQRFLIFAGGVIMNIVFGLIVFPIVFFVGVPFEAPVIGATDPGSPA*QAGIEPGTTVLAIEGEEVRSFNDITTAIALGSAGPLELEVQEPGTEQPRSVFVEPAYNETLGLRLLGVRQALHADMKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMR----ALIHAQA---NVLTPRLRVETPGVPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRGEA--ERLGLMPGERITAVDGVPVLAEGDFAR--RMAAATGPVVLTVEGSD 786
            VGQRF I++GGVIMN++F L+ FP+V   GVP   PV+ A  PG PA  AGI  GT VLA+ G+EV  F  I   +AL  AGP++L ++ PG++   ++ + P Y+++ G + +GVR  +    ++ VAP+ PA KAG++DGD L  +  AP G   +R    AL   +A    +L     +E P VPDS            AD +   G+ P+   I  +R     +R+GL  G R+  V+G P+    D  +  R     GP+ + ++ SD
Sbjct:   93 VGQRFFIYSGGVIMNVIFALVAFPLVLASGVPVLRPVVAAPTPGMPAWHAGIPAGTEVLAVGGDEVYDFFHIPNEVALSDAGPIQLTLRYPGSDSLHTLSITPVYSDSGGFKQIGVRPGVDPSHRIQVAPDGPATKAGLMDGDTLVSISGAPAGLTPVRQMEWALERGEAIVVRILRQGQPLELPIVPDST----------PADQKL-FGIEPMQNLIKDLRPGPWIDRMGLKKGARLLEVNGQPIRRPTDLGKALRGTGEAGPLTVVIQPSD 354          
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A7C8CT19_9BACT (RIP metalloprotease RseP n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CT19_9BACT)

HSP 1 Score: 150 bits (379), Expect = 5.030e-38
Identity = 94/256 (36.72%), Postives = 143/256 (55.86%), Query Frame = 1
Query:    1 VGQRFLIFAGGVIMNIVFGLIVFPIVFFVGVPFEAPVIGATDPGSPA*QAGIEPGTTVLAIEGEEVRSFNDITTAIALGSAGPLELEVQEPGTEQPRSVFVEPAYNETLGLRLLG-VRQALHADMKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQANVLTPRLRVETPGVPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRGE--AERLGLMPGERITAVDGVPVLAEGDFARRMAAATGP 759
            V QRFLI++GGV+ N++FGL+VFPI+F +G+P   P+ G  + GSPA  AG+EPG+ VL + G E+     +++ +A G + P+EL ++ PG+E  R V +EP +++ +GL  +G +  A      + VAP S A +AG++DGD L  V          R L  A        LR+E  G  + L  V++E     A GR  +GV PL   +  +R +  AE +GL  G+R+  +DG  V    D    + A+ GP
Sbjct:   95 VPQRFLIYSGGVLSNVLFGLVVFPILFLLGIPSFEPITGQVEAGSPAWHAGVEPGSRVLQVNGREIYDITQVSSEVAYGGSDPVELLLRPPGSETTRRVLLEPRFDDQMGLFTIGRLGPAADRAAPLFVAPGSQAEQAGVVDGDRLLGVTGVSAALSPQRQLALAMDTEEPISLRLERDG--EEL-LVQVEPRELKATGRPLLGVQPLVNLVTGLRADQAAEAMGLEVGDRVLRIDGQSVDRTSDILNLLFASPGP 347          
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A523PKM8_9BACT (RIP metalloprotease RseP n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PKM8_9BACT)

HSP 1 Score: 148 bits (374), Expect = 2.790e-37
Identity = 102/280 (36.43%), Postives = 147/280 (52.50%), Query Frame = 1
Query:    1 VGQRFLIFAGGVIMNIVFGLIVFPIVFFVGVPFEAPVIGATDPGSPA*QAGIEPGTTVLAIEGEEVRSFNDITTAIALGSAGPLELEVQEPGTEQPRSVFVEPAYNETLGLRLLGVRQALHADMKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQANVLTPRLRVETPGVPDSLRWVELERGPPAADGRA-----------TIGVMPLHQEIVAVRGEA--ERLGLMPGERITAVDGVPVLAEGDFARRMAAATGPVVLTVEGSDAHRTV 801
            VG RF I++GGV+MN++F L+VFP+V   GVP   PV+ A  PGSPA  A +  G+ +LA+  ++V  F  I   IALG + P+ LE+  PG   PR   + P Y+E  G   +G+  A     K+ VA +SPA  AG+ +GD +  VE A P   L + LI A  ++    LRV   G P+ L  V  E G      RA            IGV P+   +  +RG A    LG+  G+R+ +V+G P+   GDF   + A  G +V+ +E +    T+
Sbjct:   95 VGARFFIYSGGVLMNVIFALVVFPLVLLAGVPSMVPVVDAPLPGSPAWYARVPAGSRILAVNDKQVFDFFHIGNEIALGGSEPVRLELLAPGDSAPRVFEIVPRYSEDPGFYRVGLSPAPDPTGKILVAQDSPATLAGLDEGDRILGVEGASPALSLRQQLILAFKSMGPVTLRVA--GDPERLVTVTPEEGEAFTTRRAFGIERRKDRPRLIGVEPVSAYVKDLRGNAIARSLGIHLGDRVRSVNGRPIHRSGDFLLGLLAGEGRLVIDIERNGERHTL 372          
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A518BKQ8_9BACT (Regulator of sigma-E protease RseP n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BKQ8_9BACT)

HSP 1 Score: 139 bits (351), Expect = 4.240e-34
Identity = 97/268 (36.19%), Postives = 151/268 (56.34%), Query Frame = 1
Query:    1 VGQRFLIFAGGVIMNIVFGLIVFPIVFFVGVPFEAPVIGATDPGSPA*QAGIEPGTTVLAIEGEEVRSFNDITTAIALGSAGPLELEVQEPGTEQPRSVFVEPAYNETLGLRLLGV-RQALHADMKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQANVLTPRLRV--ETPGVPDSLR-WVELERGPPAADGRATIGVMPLHQEIVAVR-GEA-ERLGLMPGERITAVDGVPVLAEGDFARRMAAATG--PVVLTVEG 780
            VGQRFL+++GGV+MN+   L++FPI+F+ GVPF  P IG  DPG PA +AG+  GT ++A+ G  V     + T IALG    +EL V++PG+   R V VEP ++E +G   +G+ R AL  + ++ VA ++PA +AG+  GD L++V+  P    L   L  A  +     L V  ++ G P ++    +L+ GP    GR  +G++P    + A+R G A + LGL   + + A+    +L  GD      AA    P+V+  +G
Sbjct:   92 VGQRFLVYSGGVLMNMGLALVLFPILFWSGVPFSKPAIGTPDPGGPAWRAGLTNGTEIVAVNGHSVLDGLHVATEIALGDRDRVELLVRDPGSTSTRKVVVEPEHDERMGFNSIGLGRPALDPEHRIDVAEDTPAWRAGLRPGDRLQNVDGLPAAMQLEDQLRVAMQDRSPLELTVLRKSDGSPLTVSIQPDLKEGP----GRPRLGILPALCVVAALRPGPATDELGLRVDDALIAIGDRRILQRGDLPLAWLAAEPDEPLVIARDG 355          
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A3M2AL24_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2AL24_9BACT)

HSP 1 Score: 138 bits (347), Expect = 1.230e-33
Identity = 93/246 (37.80%), Postives = 134/246 (54.47%), Query Frame = 1
Query:    4 GQRFLIFAGGVIMNIVFGLIVFPIVFFVGVPFEAPVIGATDPGSPA*QAGIEPGTTVLAIEGEEVRSFNDITTAIALGSAGPLELEVQEPGTEQPRSVFVEPAYNETLGLRLLGVRQALHA-DMKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQANVLTPRL--RVETPGVPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRGEAERLGLMPGERITAVDGVPVLAEGDFA 732
            G R LIF+GG++MN +F L++ PI+F VGVPFEAPV G  +PG PA +AG+  G  +LA+ GE + +F     A+ALG A  + +++ EP   + R V + PAY+E  G+R +G+  +L +  + + + P S A +AG+ DGD L  V+  P        L+   A + +  L   VE  G     R   LER  P A+    IGV+ L  E+  VR       L PG+RI    G PV A  + A
Sbjct:   87 GWRLLIFSGGILMNFLFALVLIPILFAVGVPFEAPVAGQVEPGGPAWRAGVREGERILAVNGEPIHAFRSFAAAVALGEAEEVVVDLAEPDGGR-RQVRLRPAYDEEAGVRRVGLAPSLWSPSLTLRIRPGSVAEEAGLRDGDRLIGVDGVPVRDRQAARLLLEHALLASGPLVLAVEREGERIEAR---LERTAPTAEDPPQIGVLHLLNEVQEVRDPRLAAVLRPGDRILRAAGRPVRAMAELA 328          
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Match: A0A518D0H0_9BACT (Regulator of sigma-W protease RasP n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D0H0_9BACT)

HSP 1 Score: 137 bits (344), Expect = 3.750e-33
Identity = 92/245 (37.55%), Postives = 131/245 (53.47%), Query Frame = 1
Query:    1 VGQRFLIFAGGVIMNIVFGLIVFPIVFFVGVPFEAPVIGATDPGSPA*QAGIEPGTTVLAIEGEEVRSFNDITTAIALGSAGPLELEVQEPGTEQPRSVFVEPAYNETLGLRLLGVRQALHADMKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQANVLTPRLRV-ETPGVPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRGEAERLGLMP-GERITAVDGVPVLAEGDF 729
            VGQRF +++ GV+MN++F ++V PI+F+VGVPF+ PV+G    G PA +AG+  GT VL + G  V  F  I++ +AL ++GPL + V+ PG  +P+ V VEP      G R + V         +   P+ PAA+AGIL G+ L      P    L R L  A       RLR+ +  GV    R VELE    AA  RA IGV  L  ++  +RG    +  +P G R+  V G+ +    D 
Sbjct:   91 VGQRFFVYSAGVLMNLLFAIVVLPILFWVGVPFDRPVLGDPVFGGPAWEAGLTAGTEVLEVGGNRVFEFGQISSEVALSASGPLTMLVRPPGATEPQVVRVEPVQGSE-GFREIQVSSGGSPTGALDPTPDEPAARAGILPGERLLGAVGQPSRLSLDRQLYRALEPGENLRLRIADADGVE---REVELELEWKAAGPRALIGVASLGNKVAGLRGGGPLVDALPLGSRLERVRGIEITNHDDL 331          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84071.19617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E5X311_9BACT4.590e-4640.78Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D5W9U7_9BACT4.350e-4242.63RIP metalloprotease RseP n=1 Tax=Planctomycetes ba... [more]
A0A800G0Y5_9BACT4.210e-4138.55RIP metalloprotease RseP n=1 Tax=Planctomycetes ba... [more]
A0A2D6HER2_9BACT7.660e-4139.78RIP metalloprotease RseP n=1 Tax=Planctomycetes ba... [more]
A0A2E6D9Y4_9BACT4.090e-4036.63RIP metalloprotease RseP n=2 Tax=cellular organism... [more]
A0A7C8CT19_9BACT5.030e-3836.72RIP metalloprotease RseP n=1 Tax=Planctomycetes ba... [more]
A0A523PKM8_9BACT2.790e-3736.43RIP metalloprotease RseP n=1 Tax=Planctomycetes ba... [more]
A0A518BKQ8_9BACT4.240e-3436.19Regulator of sigma-E protease RseP n=1 Tax=Plancto... [more]
A0A3M2AL24_9BACT1.230e-3337.80Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518D0H0_9BACT3.750e-3337.55Regulator of sigma-W protease RasP n=1 Tax=Plancto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84071contigM-pyrifera_M_contig84071:81..884 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size804
Cds size435
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816748.0892034-CDS-M-pyrifera_M_contig84071:80..5151622816748.0892034-CDS-M-pyrifera_M_contig84071:80..515Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84071 81..515 -
1692278154.7388935-CDS-M-pyrifera_M_contig84071:80..5151692278154.7388935-CDS-M-pyrifera_M_contig84071:80..515Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84071 81..515 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816748.100977-UTR-M-pyrifera_M_contig84071:515..8841622816748.100977-UTR-M-pyrifera_M_contig84071:515..884Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig84071 516..884 -
1692278154.754466-UTR-M-pyrifera_M_contig84071:515..8841692278154.754466-UTR-M-pyrifera_M_contig84071:515..884Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig84071 516..884 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84071.19617.1prot_M-pyrifera_M_contig84071.19617.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84071 81..515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84071.19617.1

>prot_M-pyrifera_M_contig84071.19617.1 ID=prot_M-pyrifera_M_contig84071.19617.1|Name=mRNA_M-pyrifera_M_contig84071.19617.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
MKMSVAPESPAAKAGILDGDFLRDVENAPPGYGLMRALIHAQANVLTPRL
RVETPGVPDSLRWVELERGPPAADGRATIGVMPLHQEIVAVRGEAERLGL
MPGERITAVDGVPVLAEGDFARRMAAATGPVVLTVEGSDAHRTVS
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mRNA from alignment at M-pyrifera_M_contig84071:81..884-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84071.19617.1 ID=mRNA_M-pyrifera_M_contig84071.19617.1|Name=mRNA_M-pyrifera_M_contig84071.19617.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig84071:81..884- (Macrocystis pyrifera P11B4 male)
GTCGGCCAGCGCTTCCTGATCTTCGCCGGCGGCGTGATCATGAACATCGT CTTCGGCCTGATCGTGTTCCCGATCGTGTTCTTCGTCGGCGTGCCCTTCG AGGCGCCGGTGATCGGCGCCACCGACCCCGGCTCGCCGGCGTGACAGGCG GGCATCGAGCCGGGCACGACCGTGCTCGCGATCGAGGGCGAGGAGGTGCG CTCCTTCAACGACATCACCACCGCCATCGCGCTCGGCTCGGCCGGGCCGT TGGAGCTCGAGGTTCAAGAGCCCGGGACCGAGCAGCCGCGCTCGGTGTTC GTGGAGCCCGCGTACAACGAGACGCTCGGGCTGCGCTTGCTGGGCGTGCG TCAGGCGCTGCACGCGGACATGAAGATGAGCGTCGCGCCGGAGAGTCCGG CGGCCAAGGCGGGCATCCTCGATGGCGACTTCCTGCGCGATGTCGAGAAC GCGCCGCCGGGTTACGGTTTGATGCGCGCGCTGATCCATGCGCAAGCGAA CGTGCTCACGCCGCGGCTGCGGGTCGAGACGCCGGGCGTGCCGGACTCGC TGCGGTGGGTCGAGCTCGAGCGCGGGCCGCCTGCGGCCGACGGCCGCGCG ACGATCGGCGTGATGCCGCTGCACCAGGAGATCGTCGCCGTGCGCGGCGA AGCCGAACGCCTCGGGCTGATGCCCGGCGAGCGGATCACCGCCGTCGACG GCGTGCCGGTGTTGGCCGAGGGTGACTTCGCGCGGCGGATGGCCGCGGCG ACCGGGCCGGTCGTGCTCACGGTCGAGGGCAGCGACGCGCACCGCACGGT CTCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84071:81..884-

>mRNA_M-pyrifera_M_contig84071.19617.1 ID=mRNA_M-pyrifera_M_contig84071.19617.1|Name=mRNA_M-pyrifera_M_contig84071.19617.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig84071:81..884- (Macrocystis pyrifera P11B4 male)
ATGAAGATGAGCGTCGCGCCGGAGAGTCCGGCGGCCAAGGCGGGCATCCT
CGATGGCGACTTCCTGCGCGATGTCGAGAACGCGCCGCCGGGTTACGGTT
TGATGCGCGCGCTGATCCATGCGCAAGCGAACGTGCTCACGCCGCGGCTG
CGGGTCGAGACGCCGGGCGTGCCGGACTCGCTGCGGTGGGTCGAGCTCGA
GCGCGGGCCGCCTGCGGCCGACGGCCGCGCGACGATCGGCGTGATGCCGC
TGCACCAGGAGATCGTCGCCGTGCGCGGCGAAGCCGAACGCCTCGGGCTG
ATGCCCGGCGAGCGGATCACCGCCGTCGACGGCGTGCCGGTGTTGGCCGA
GGGTGACTTCGCGCGGCGGATGGCCGCGGCGACCGGGCCGGTCGTGCTCA
CGGTCGAGGGCAGCGACGCGCACCGCACGGTCTCGATGAAGATGAGCGTC
GCGCCGGAGAGTCCGGCGGCCAAGGCGGGCATCCTCGATGGCGACTTCCT
GCGCGATGTCGAGAACGCGCCGCCGGGTTACGGTTTGATGCGCGCGCTGA
TCCATGCGCAAGCGAACGTGCTCACGCCGCGGCTGCGGGTCGAGACGCCG
GGCGTGCCGGACTCGCTGCGGTGGGTCGAGCTCGAGCGCGGGCCGCCTGC
GGCCGACGGCCGCGCGACGATCGGCGTGATGCCGCTGCACCAGGAGATCG
TCGCCGTGCGCGGCGAAGCCGAACGCCTCGGGCTGATGCCCGGCGAGCGG
ATCACCGCCGTCGACGGCGTGCCGGTGTTGGCCGAGGGTGACTTCGCGCG
GCGGATGGCCGCGGCGACCGGGCCGGTCGTGCTCACGGTCGAGGGCAGCG
ACGCGCACCGCACGGTCTCG
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