prot_M-pyrifera_M_contig84061.19612.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig84061.19612.1
Unique Nameprot_M-pyrifera_M_contig84061.19612.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length186
Homology
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BLAST of mRNA_M-pyrifera_M_contig84061.19612.1 vs. uniprot
Match: A0A2E2BZM2_9PLAN (Uncharacterized protein n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E2BZM2_9PLAN)

HSP 1 Score: 83.2 bits (204), Expect = 1.860e-16
Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 0 
Query:    1 VADDRTQRERNDAIIEAFNANGGRAVWHPIAASPEDR-TEVMVWKHVGTVPRESRLTPLFQLRGLSKLLVYNFYTRDSDLAGIDQMEDLPGLLIRGQITDEGLRHL 105
            + + +  R RND  + A+N +GG A WH      +   +E+MV +   T  R S   PLFQ+RG+SK++++     D++L GI +M+DLP LLI G+ITD+GLRHL
Sbjct:   20 IVEAQEHRVRNDEYLAAYNDSGGWAYWHDSKRGQDPHGSELMVRRSNRTELRVST-KPLFQMRGVSKVILHGVDFTDAELDGISEMKDLPSLLINGKITDDGLRHL 124
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84061.19612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E2BZM2_9PLAN1.860e-1642.45Uncharacterized protein n=1 Tax=Gimesia sp. TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 55..184
e-value: 2.8E-12
score: 48.4
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 57..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84061contigM-pyrifera_M_contig84061:153..710 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84061.19612.1mRNA_M-pyrifera_M_contig84061.19612.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig84061 153..710 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig84061.19612.1 ID=prot_M-pyrifera_M_contig84061.19612.1|Name=mRNA_M-pyrifera_M_contig84061.19612.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp
VADDRTQRERNDAIIEAFNANGGRAVWHPIAASPEDRTEVMVWKHVGTVP
RESRLTPLFQLRGLSKLLVYNFYTRDSDLAGIDQMEDLPGLLIRGQITDE
GLRHLSDAKSLRKLWIYGTKVRGHGLRHLQHLDQLELLWIDGELSDEGIA
ELKRMTHLKHLHVDHAGYEVGEILEKSLPDTEVVY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf