prot_M-pyrifera_M_contig81915.19163.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81915.19163.1
Unique Nameprot_M-pyrifera_M_contig81915.19163.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length90
Homology
BLAST of mRNA_M-pyrifera_M_contig81915.19163.1 vs. uniprot
Match: UPI001986E4DE (zf-HC2 domain-containing protein n=1 Tax=Streptomyces echinoruber TaxID=68898 RepID=UPI001986E4DE)

HSP 1 Score: 74.3 bits (181), Expect = 2.040e-15
Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    5 RRRKSGPSCEEVMEVLQSYLDGETDAETARSVAAHLEVCEGCGPEAAVFRRIKLSLHQQSEPVDPAVLSSLEAFGRRL 82
            R  + G +C +   VLQ+YLDGETD  TAR +AAHLE C  CGPEA  +RRIK +L ++SEP DP  +  L  F   L
Sbjct:    9 RPAQRGMTCMKAARVLQAYLDGETDEVTARRMAAHLEDCGRCGPEAETYRRIKGALARRSEP-DPDAVKRLRKFAEGL 85          
BLAST of mRNA_M-pyrifera_M_contig81915.19163.1 vs. uniprot
Match: UPI001F3DDA1B (zf-HC2 domain-containing protein n=1 Tax=Streptomyces acididurans TaxID=2784346 RepID=UPI001F3DDA1B)

HSP 1 Score: 66.2 bits (160), Expect = 3.080e-12
Identity = 41/85 (48.24%), Postives = 49/85 (57.65%), Query Frame = 0
Query:    1 MKFFRRRKSGP---SCEEVMEVLQSYLDGETDAETARSVAAHLEVCEGCGPEAAVFRRIKLSLHQQSEPVDPAVLSSLEAFGRRL 82
            M+ FR   +G    +C  V  VLQSYLDGETDA T R V AHLE C  CG EAAV R IK +  ++  P D   +  L  +GR L
Sbjct:    1 MRRFRPGSAGHRRMNCLRVQRVLQSYLDGETDAATVRRVEAHLEDCRRCGLEAAVHREIKAAFTRREAP-DRDAVERLTEWGRSL 84          
BLAST of mRNA_M-pyrifera_M_contig81915.19163.1 vs. uniprot
Match: UPI0017D39AE3 (Zf-HC2 domain-containing protein n=1 Tax=Catenulispora sp. TaxID=1962977 RepID=UPI0017D39AE3)

HSP 1 Score: 64.7 bits (156), Expect = 7.730e-12
Identity = 38/76 (50.00%), Postives = 43/76 (56.58%), Query Frame = 0
Query:   13 CEEVMEVLQSYLDGETDAETARSVAAHLEVCEGCGPEAAVFRRIKLSLHQQSEPVDPAVLSSLEAFGRRLASGGPN 88
            C  V  V+QSYLDG TDA TAR V  HLEVC  CG EA  +R I  +L Q   P + A L  L AFG  L    P+
Sbjct:    3 CWRVSRVVQSYLDGHTDAVTARRVREHLEVCRRCGLEAETYRAIIDALAQNGRPAETA-LDRLRAFGDGLLEVPPD 77          
BLAST of mRNA_M-pyrifera_M_contig81915.19163.1 vs. uniprot
Match: UPI001E5E8797 (zf-HC2 domain-containing protein n=1 Tax=Streptomyces gobiensis TaxID=2875706 RepID=UPI001E5E8797)

HSP 1 Score: 58.2 bits (139), Expect = 3.120e-9
Identity = 31/68 (45.59%), Postives = 40/68 (58.82%), Query Frame = 0
Query:   19 VLQSYLDGETDAETARSVAAHLEVCEGCGPEAAVFRRIKLSLHQQSEPVDPAVLSSLEAFGRRLASGG 86
            +LQSYLD ETDA TAR V AHL+ C  C  +A  F++++ SL +   P D A +  L  F   L  GG
Sbjct:    5 LLQSYLDRETDAATARHVGAHLDECHHCDRDARTFQQLRSSLTRHGGP-DEAAVGRLHDFAHSLLRGG 71          
BLAST of mRNA_M-pyrifera_M_contig81915.19163.1 vs. uniprot
Match: A0A537VCH2_9ACTN (Anti-sigma factor n=3 Tax=Terrabacteria group TaxID=1783272 RepID=A0A537VCH2_9ACTN)

HSP 1 Score: 48.9 bits (115), Expect = 1.110e-5
Identity = 32/69 (46.38%), Postives = 39/69 (56.52%), Query Frame = 0
Query:   12 SCEEVMEVLQSYLDGETDAETARSVAAHLEVCEGCGPEAAVFRR-IKLSLHQQSEPVDPAVLSSL-EAF 78
            SC+EV+E+L +YLDGE D  T   V AHL  C+GC      FR  I+LS     E VD     +L EAF
Sbjct:    2 SCQEVVELLSAYLDGELDPTTLERVEAHLAGCDGCTMVLEEFRETIRLSGGLTVEQVDETQRRTLLEAF 70          
BLAST of mRNA_M-pyrifera_M_contig81915.19163.1 vs. uniprot
Match: A0A7X5WAY2_9BACT (zf-HC2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X5WAY2_9BACT)

HSP 1 Score: 48.1 bits (113), Expect = 2.220e-5
Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0
Query:   12 SCEEVMEVLQSYLDGETDAETARSVAAHLEVCEGCGPEAAVFRRIKLSLHQ--QSEPVDP 69
            SC+E +E L  YLDGE  A ++  V  H+EVCE C PE       + +LH+  + +P+ P
Sbjct:    7 SCQEALERLYEYLDGELTARSSDEVRHHIEVCEACYPEVKFTTEFRDALHRAARGQPLCP 66          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81915.19163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
UPI001986E4DE2.040e-1551.28zf-HC2 domain-containing protein n=1 Tax=Streptomy... [more]
UPI001F3DDA1B3.080e-1248.24zf-HC2 domain-containing protein n=1 Tax=Streptomy... [more]
UPI0017D39AE37.730e-1250.00Zf-HC2 domain-containing protein n=1 Tax=Catenulis... [more]
UPI001E5E87973.120e-945.59zf-HC2 domain-containing protein n=1 Tax=Streptomy... [more]
A0A537VCH2_9ACTN1.110e-546.38Anti-sigma factor n=3 Tax=Terrabacteria group TaxI... [more]
A0A7X5WAY2_9BACT2.220e-540.00zf-HC2 domain-containing protein n=1 Tax=Gemmatimo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027383Putative zinc-fingerPFAMPF13490zf-HC2coord: 13..46
e-value: 1.1E-10
score: 41.6
NoneNo IPR availableGENE3D1.10.10.1320coord: 11..86
e-value: 1.4E-7
score: 34.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81915contigM-pyrifera_M_contig81915:528..797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81915.19163.1mRNA_M-pyrifera_M_contig81915.19163.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81915 528..797 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81915.19163.1 ID=prot_M-pyrifera_M_contig81915.19163.1|Name=mRNA_M-pyrifera_M_contig81915.19163.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
MKFFRRRKSGPSCEEVMEVLQSYLDGETDAETARSVAAHLEVCEGCGPEA
AVFRRIKLSLHQQSEPVDPAVLSSLEAFGRRLASGGPNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027383Znf_put