prot_M-pyrifera_M_contig81804.19145.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig81804.19145.1
Unique Nameprot_M-pyrifera_M_contig81804.19145.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length305
Homology
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A6B2KW35_9EUKA (Sister chromatid cohesion protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KW35_9EUKA)

HSP 1 Score: 154 bits (390), Expect = 1.930e-38
Identity = 105/299 (35.12%), Postives = 153/299 (51.17%), Query Frame = 0
Query:    6 TSVALPLLVCESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVETEGKVVFIQVISAAVLLMLQ-SCG----RSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAW-----QVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKECRLFSL--APKDDSEEQTQGS----CSCGQVLVN---RFMLSCERCGTWFHGECMGVDPNNVPSEWHCRPCRTILRALESVGEMSED 285
            T++ LP    E   + QL A+ V+ ++F RY  HRGMI  DLF+ L KLPT KR LR Y++  + K   IQ++SA ++  +Q S G    + SD  S  +N Y  A   A   +  F++   +  TA      + EYR IL NL +D L   +LP WP +E+LLSVL    +  + ++       E LR ++ Q LG +A++++Q+    KE  LF    A K + +    G     C C Q +       M+ C+RC  WFH EC+ VD  N P  W+C PC  ILR +    +   D
Sbjct:  183 TAITLPTFFVEGIYSTQLSALNVIRAIFSRYPKHRGMILDDLFNDLIKLPTSKRDLRNYQLVDQKKS--IQMVSALLMHCIQCSAGIPKEKDSDNESEGVNSYTVAIMCANNFIQSFMKNCISTNTAQSNKEKEAEYRTILSNLVEDLLTTLNLPEWPSSELLLSVLGRNLVQNVVKKDTN----EALRMLSIQLLGTIASRVQQDVILCKESTLFVFPKARKLNEDGSVVGGEIDECICKQTIEGISTASMIDCDRCRRWFHCECVAVDQVNPPKTWYCDPC-LILRQINQHKKQLHD 474          
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: UPI001C41EEB2 (nipped-B-like protein B isoform X1 n=4 Tax=Solea senegalensis TaxID=28829 RepID=UPI001C41EEB2)

HSP 1 Score: 116 bits (290), Expect = 3.620e-25
Identity = 76/227 (33.48%), Postives = 124/227 (54.63%), Query Frame = 0
Query:   16 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVETEGKVVFIQVISAAVLLMLQSCGR-------------SSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKEC-----RLFSLAPKDDSEEQTQ 224
            E+   LQL AI ++ +VF RY+ HR +I +++F SL +LPTGKR LR +R+ ++G+ V+IQ+++A VL ++Q   R               D   +  N YE A  +A+  L++F++K  +K    + +YR + EN   D L   + P WP AE+LLS+L  +    L  Q    +    LR  +   LG VA++LR++A ++K       R+   +P +D  +Q Q
Sbjct: 1380 ENVSELQLCAITLVTAVFSRYEKHRQLILEEIFTSLARLPTGKRSLRNFRINSDGENVYIQMVTALVLQLIQCVVRLPYEREEADESKKKVDKDVFITNSYETAMRTAQNFLSVFLKKCGSKQG--EEDYRPLFENFVHDLLSAVNRPEWPAAELLLSLLGRL----LVHQFSNKQTEMALRVASLDYLGTVASRLRKDAVNSKMDQKAIDRILRESPGNDEIQQLQ 1600          
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A267DR52_9PLAT (Nipped-B protein n=6 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DR52_9PLAT)

HSP 1 Score: 112 bits (279), Expect = 9.770e-24
Identity = 72/198 (36.36%), Postives = 112/198 (56.57%), Query Frame = 0
Query:   16 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVETEGKVVFIQVISAAVLLMLQSC---------GRSSDGTSWA--LNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEA 202
            E+ E LQL A+ +  SVF +Y+ HR +I +DLF SL +LP+ KR LR +R+ +E     IQ+++A  LL++QS           +  D T+    L+ YE+A  +A+V L +F+ K   KA   + +YR I E   +D LL  + P WP AE+ LS+L G+ +   A +       + LR  +   LG VA++LR++A
Sbjct:  672 ENVENLQLSALRLCTSVFCQYEKHRQLILEDLFASLARLPSSKRSLRSFRLNSEES---IQMLTALSLLLVQSVVLLPAKVPSSKDQDNTAAMALLDAYESAKKTAQVFLVVFLNKCAKKAE--EQDYRGIFEKFVEDLLLAVNKPEWPAAEMFLSLLGGLLVKQFADRSVD----QALRVASLDYLGTVASRLRKDA 860          
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A822HM29_9NEOB (Nipped-B protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822HM29_9NEOB)

HSP 1 Score: 111 bits (277), Expect = 1.710e-23
Identity = 74/229 (32.31%), Postives = 122/229 (53.28%), Query Frame = 0
Query:   16 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVET---EGKVVFIQVISAAVLLMLQ--------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKEC-----RLFSLAPKDDSEEQ 222
            E+   LQL AI ++ +VF RY+ HR +I ++LF SL +LPT KR LR +R+ +   +G+ ++IQ+++A VL ++Q                 +  D   +  N YE A  +A+  L++F++K  +K    + +YR + EN  QD L   + P WP AE+LLS+L  + +   + +  +      LR  +   LG VA +LR++A  +K       R+   APK + E Q
Sbjct:  232 ENVSELQLCAIKLVTAVFSRYEKHRQLILEELFTSLARLPTSKRSLRNFRLNSSDDDGEAMYIQMVTALVLQLIQCVVHLPSDREHAEEESNKKIDQDVFITNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVSSKMDQGSIDRILKQAPKGEDEIQ 454          
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A7K9E5S5_BARMA (NIPBL protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7K9E5S5_BARMA)

HSP 1 Score: 106 bits (264), Expect = 2.400e-23
Identity = 68/210 (32.38%), Postives = 114/210 (54.29%), Query Frame = 0
Query:   16 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRV---ETEGKVVFIQVISAAVLLMLQ----------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAK 206
            E+   LQL AI ++ +VF RY+ HR +I +++F SL +LPT KR LR +R+   +T+G+ ++IQ+++A VL ++Q                   +  D      N YE A  +A+  L++F++K  +K    + +YR + EN  QD L   + P WP AE+LLS+L  + +   + +  +      LR  +   LG VA +LR++A  +K
Sbjct:   12 ENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEELNKKVDQDVLITNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVTSK 215          
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A8C5P6K7_9ANUR (Nipped-B protein n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5P6K7_9ANUR)

HSP 1 Score: 110 bits (276), Expect = 2.520e-23
Identity = 74/229 (32.31%), Postives = 122/229 (53.28%), Query Frame = 0
Query:   16 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVET---EGKVVFIQVISAAVLLMLQ--------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKEC-----RLFSLAPKDDSEEQ 222
            E+   LQL AI ++ +VF RY+ HR +I ++LF SL +LPT KR LR +R+ +   +G+ ++IQ+++A VL ++Q                 +  D   +  N YE A  +A+  L++F++K  +K    + +YR + EN  QD L   + P WP AE+LLS+L  + +   + +  +      LR  +   LG VA +LR++A  +K       R+   APK + E Q
Sbjct: 1577 ENVSELQLCAIKLVTAVFSRYEKHRQLILEELFTSLARLPTSKRSLRNFRLNSSDDDGEAMYIQMVTALVLQLIQCVVHLPSDREHAEEESNKKVDQDVFITNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVTSKMDQGSIDRILKQAPKGEDEIQ 1799          
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A7K5MAR7_CARCD (NIPBL protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K5MAR7_CARCD)

HSP 1 Score: 106 bits (264), Expect = 2.870e-23
Identity = 68/210 (32.38%), Postives = 114/210 (54.29%), Query Frame = 0
Query:   16 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRV---ETEGKVVFIQVISAAVLLMLQ----------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAK 206
            E+   LQL AI ++ +VF RY+ HR +I +++F SL +LPT KR LR +R+   +T+G+ ++IQ+++A VL ++Q                   +  D      N YE A  +A+  L++F++K  +K    + +YR + EN  QD L   + P WP AE+LLS+L  + +   + +  +      LR  +   LG VA +LR++A  +K
Sbjct:   63 ENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEESNKKVDQDVLMTNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVTSK 266          
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A8J6FJD8_ELECQ (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6FJD8_ELECQ)

HSP 1 Score: 110 bits (275), Expect = 3.270e-23
Identity = 74/229 (32.31%), Postives = 122/229 (53.28%), Query Frame = 0
Query:   16 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVET---EGKVVFIQVISAAVLLMLQ--------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKEC-----RLFSLAPKDDSEEQ 222
            ES   LQL AI ++ +VF RY+ HR +I ++LF SL +LPT KR LR +R+ +   +G+ ++IQ+++A VL ++Q                 +  D   +  N YE A  +A+  L++F++K  +K    + +YR + EN  QD L   + P WP AE+LLS+L  + +   + +  +      LR  +   LG VA +LR++A  +K       R+   AP+ + E Q
Sbjct: 1430 ESVSELQLCAIKLVTAVFSRYEKHRQLILEELFTSLARLPTSKRSLRNFRLNSSDDDGEAMYIQMVTALVLQLIQCVVHLPFDKENIEEESNKKIDQDVFITNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVTSKMDQGSIDRILKQAPEGEDEIQ 1652          
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: UPI0008545AAE (nipped-B-like protein isoform X1 n=5 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008545AAE)

HSP 1 Score: 110 bits (275), Expect = 3.400e-23
Identity = 69/208 (33.17%), Postives = 114/208 (54.81%), Query Frame = 0
Query:   16 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYRVET---EGKVVFIQVISAAVLLMLQ--------------SCGRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAK 206
            E+   LQL AI  + +VF RY+ HR +I ++LF SL +LPT KR LR +R+ +   +G+ ++IQ+++A VL ++Q               C +  D   +  N YE A  +A+  L++F++K  +K    + +YR + EN  QD L   + P WP AE+LLS+L  + +   + +  +      LR  +   LG VA +LR++A  +K
Sbjct: 1518 ENVSELQLCAIKQVTAVFSRYEKHRQLILEELFTSLARLPTSKRSLRNFRLNSSDDDGEAMYIQMVTALVLQLIQCVVHLPSDRDHAEEECNKKVDQDVFITNSYETAMRTAQNFLSIFLKKCGSKQG--EEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEM----ALRVASLDYLGTVAARLRKDAVTSK 1719          
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Match: A0A1A8NRQ9_9TELE (Nipped-B protein (Fragment) n=3 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8NRQ9_9TELE)

HSP 1 Score: 109 bits (273), Expect = 5.740e-23
Identity = 76/230 (33.04%), Postives = 120/230 (52.17%), Query Frame = 0
Query:   16 ESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHSLDKLPTGKRGLRKYR---VETEGKVVFIQVISAAVLLMLQSC-------------GRSSDGTSWALNGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLPHWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQEASHAKEC-----RLFSLAPKDDSEEQTQ 224
            E+   LQL AI ++ +VF RY+ HR +I +D+F SL KLPT KR LR +R   ++++G+ ++IQ++SA VL ++Q                +  D  +   N YE A  +A+  L++F++K  +K    + +YR + EN   D L     P WP AE+LLS+L  +    L  Q    +    LR  +   LG VA++LR++A  +K       R+    P  D  +Q Q
Sbjct:   92 ENVSELQLCAITLVTAVFSRYEKHRQLILEDIFTSLAKLPTSKRNLRNFRLNSIDSDGEPLYIQMVSALVLQLIQCVVHFPSEKEAEEGQNKKLDRDALITNTYETAMRTAQNFLSVFLKKCGSKQG--EEDYRPLFENFVHDLLSAVSKPEWPAAELLLSLLGRL----LVHQFSNKQTEMALRVASLDYLGTVASRLRKDALTSKMNQRAIDRILKETPGSDEVQQLQ 315          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81804.19145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B2KW35_9EUKA1.930e-3835.12Sister chromatid cohesion protein n=1 Tax=Arcella ... [more]
UPI001C41EEB23.620e-2533.48nipped-B-like protein B isoform X1 n=4 Tax=Solea s... [more]
A0A267DR52_9PLAT9.770e-2436.36Nipped-B protein n=6 Tax=Macrostomum lignano TaxID... [more]
A0A822HM29_9NEOB1.710e-2332.31Nipped-B protein n=1 Tax=Ranitomeya imitator TaxID... [more]
A0A7K9E5S5_BARMA2.400e-2332.38NIPBL protein (Fragment) n=2 Tax=Neognathae TaxID=... [more]
A0A8C5P6K7_9ANUR2.520e-2332.31Nipped-B protein n=2 Tax=Leptobrachium leishanense... [more]
A0A7K5MAR7_CARCD2.870e-2332.38NIPBL protein (Fragment) n=3 Tax=Passeriformes Tax... [more]
A0A8J6FJD8_ELECQ3.270e-2332.31Uncharacterized protein n=1 Tax=Eleutherodactylus ... [more]
UPI0008545AAE3.400e-2333.17nipped-B-like protein isoform X1 n=5 Tax=Nanorana ... [more]
A0A1A8NRQ9_9TELE5.740e-2333.04Nipped-B protein (Fragment) n=3 Tax=Nothobranchius... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 226..270
e-value: 2.8E-7
score: 40.2
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 227..270
e-value: 3.5E-8
score: 33.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 204..271
e-value: 3.8E-14
score: 54.3
NoneNo IPR availablePANTHERPTHR21704:SF18NIPPED-B-LIKE PROTEINcoord: 2..305
IPR033031SCC2/Nipped-B familyPANTHERPTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDcoord: 2..305
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 227..269
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 219..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig81804contigM-pyrifera_M_contig81804:1..915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig81804.19145.1mRNA_M-pyrifera_M_contig81804.19145.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig81804 1..915 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig81804.19145.1 ID=prot_M-pyrifera_M_contig81804.19145.1|Name=mRNA_M-pyrifera_M_contig81804.19145.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=305bp
VVCRITSVALPLLVCESTEALQLRAIAVLCSVFGRYDAHRGMIFQDLFHS
LDKLPTGKRGLRKYRVETEGKVVFIQVISAAVLLMLQSCGRSSDGTSWAL
NGYEAASASAKVLLTLFIQKFTTKATAWQVEYRAILENLTQDFLLVAHLP
HWPMAEVLLSVLSGMYLSALAQQGKQAKALEGLRKIATQQLGAVATKLRQ
EASHAKECRLFSLAPKDDSEEQTQGSCSCGQVLVNRFMLSCERCGTWFHG
ECMGVDPNNVPSEWHCRPCRTILRALESVGEMSEDEERLLAAARKVVLHF
LQSQS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR033031SCC2/Nipped-B
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD