prot_M-pyrifera_M_contig80846.18914.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80846.18914.1
Unique Nameprot_M-pyrifera_M_contig80846.18914.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length203
Homology
BLAST of mRNA_M-pyrifera_M_contig80846.18914.1 vs. uniprot
Match: A0A329SJB7_9STRA (DUF667 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SJB7_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.050e-18
Identity = 66/202 (32.67%), Postives = 101/202 (50.00%), Query Frame = 0
Query:    2 SQRHFV-GHDGVVRLVALDPRGGALLASVSSPSATXXXXXXXRANASPRIRLWSYYAGRCLADLAAPERGCFALSFSHDGSE---LAVAGADRRGNPCILVWDVSNALEQARADSASKPEPPFAPLRPPLLACPIVAHQSSDFSLVRVSFSPFER---HKLVACGRENVRFLRVAR--GHLPSTSVVLNEHARGNVFLDVAF 194
            ++ +F+ GH   +  +A+   GG LLAS   P+ +              IRLW   +  C+  + A  +G  AL FS        L + G D      I +WD ++ L++ + D  S                 ++A Q+SDF + R+SFSP+E+   + LV+CGREN+R+ RV    GHL    V+LNE++RGNVF D+ F
Sbjct:  429 TREYFLYGHCASISALAVTNDGG-LLASAEVPTESKQNG----------IRLWDLSSRECITVIKAQPKGVHALCFSPLSKSRLLLCIVGRDECFRTQIFIWDCTS-LQREKQDPLSA-------------TVSLMARQTSDFPIDRISFSPYEQRDQYHLVSCGRENIRYWRVNSNTGHLTGCPVILNEYSRGNVFTDIGF 605          
BLAST of mRNA_M-pyrifera_M_contig80846.18914.1 vs. uniprot
Match: W2P5H4_PHYPR (DUF667 domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2P5H4_PHYPR)

HSP 1 Score: 90.5 bits (223), Expect = 1.680e-17
Identity = 67/202 (33.17%), Postives = 98/202 (48.51%), Query Frame = 0
Query:    2 SQRHFV-GHDGVVRLVALDPRGGALLASVSSPSATXXXXXXXRANASPRIRLWSYYAGRCLADLAAPERGCFALSFSHDGSE---LAVAGADRRGNPCILVWDVSNALEQARADSASKPEPPFAPLRPPLLACPIVAHQSSDFSLVRVSFSPFERHK---LVACGRENVRFLRVA--RGHLPSTSVVLNEHARGNVFLDVAF 194
            ++ +F+ GH   +  +A+    G+LLAS   P  +              IRLW+     C+  + A  +G  AL FS        L V G D      I +WD S+ L++ + D  S              A  ++A Q+SDF + R+SFSP+E      LV+CGREN+R+ RV    GHL    V+LNE++RG VF D+ F
Sbjct:  809 TREYFLYGHCAAICALAVT-NDGSLLASAEVPKESNQNG----------IRLWNLTNHDCITVIKAQPKGVHALCFSPLSKSRLLLCVVGRDECFRTQIFIWDCSS-LQRGKLDPLST-------------AVSLMARQTSDFPIDRMSFSPYEHRDQFHLVSCGRENIRYWRVNPNTGHLTGCPVILNEYSRGTVFTDIGF 985          
BLAST of mRNA_M-pyrifera_M_contig80846.18914.1 vs. uniprot
Match: A0A482RJ81_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RJ81_9ARCH)

HSP 1 Score: 83.6 bits (205), Expect = 2.300e-15
Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 0
Query:  102 SNALEQARADSASKPEPPFAPLRP------PLLACPIVAHQSSDFSLVRVSFSPFERHKLVACGRENVRFLRVARGHLPSTSVVLNEHARGNVF 189
            ++AL +  A+ +    PP A   P      PL   P+VAHQ SDF++ R+ FSP ER +L++ G EN+RF RV+R HLP TS+VLN++ARG  F
Sbjct:  306 TDALHKVMAELSMGDTPPPAESAPATVSSLPLHTLPMVAHQVSDFAITRIRFSPAERGRLMSVGHENIRFWRVSRSHLPGTSIVLNDYARGVEF 399          
BLAST of mRNA_M-pyrifera_M_contig80846.18914.1 vs. uniprot
Match: A0A813UTG0_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813UTG0_9BILA)

HSP 1 Score: 59.7 bits (143), Expect = 6.480e-7
Identity = 47/190 (24.74%), Postives = 81/190 (42.63%), Query Frame = 0
Query:    1 RSQRHFVGHDGVVRLVALDPRGGALLASVSSPSATXXXXXXXRANASPRIRLWSYYAGRCLADLAAPERGCFALSFSHDGSELAVAG-----ADRRGNP--CILVWDVSNALEQARADSASKPEPPFAPLRPPLLACPIVAHQSSDFSLVRVSFSPFERHKLVACGRENVRFLRVARG-HLPSTSVVLNE 182
            R Q  F+GH   V  +AL      LLA+V   S                +R+W   + RC+A +  P     A+ F+ D + L V G      D++ +    + V+D SN L+                         +++  S+D ++ R+ F P++  K V CGR+N++F R+     L S S+ +++
Sbjct:  935 RQQYFFIGHTDKVTSIALKVNS-TLLATVQKGSNAI-------------LRIWKLESRRCIAVVKVPAIKLCAVDFALDSNSLVVVGHSGVLEDKQNSSKTIVCVYDTSNCLKGT---------------------INLISKTSTDSTIERIKFVPYDSSKFVTCGRDNIKFWRLKNSVELKSMSISVDD 1089          
BLAST of mRNA_M-pyrifera_M_contig80846.18914.1 vs. uniprot
Match: A0A6H5JNU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNU2_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 3.950e-6
Identity = 49/142 (34.51%), Postives = 64/142 (45.07%), Query Frame = 0
Query:   74 LSFSHDGSELAVAGAD----RRGNPCILVWDVSNALEQARADSASKPEPPFAPLRPPL-------LACPIVAHQ---------SSDFSLVRVSFSPFER-HKLVACGRENVRFLRVARGHLPSTSVVLNEHARGNVFLDVAF 194
            L  SH G  LA A  D      G+  + +W+ ++   ++ ADS S         R PL        A   +AH+         S D  L  V      R  +LV+CGRENVRF RV R HLP+   VLN+ AR     D+AF
Sbjct:  730 LQLSHAGHLLASAQGDPLGAAGGHGIVRLWNATSLGRRSPADSGSARA--AGGRRTPLREGGGGKCAAHFIAHRWGVSSMCFSSDDRLLCTVGGDDHRRTQRLVSCGRENVRFWRVRRRHLPACPAVLNDFARDLACTDLAF 869          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80846.18914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A329SJB7_9STRA1.050e-1832.67DUF667 domain-containing protein n=1 Tax=Phytophth... [more]
W2P5H4_PHYPR1.680e-1733.17DUF667 domain-containing protein n=9 Tax=Phytophth... [more]
A0A482RJ81_9ARCH2.300e-1546.81Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A813UTG0_9BILA6.480e-724.74Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A6H5JNU2_9PHAE3.950e-634.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 57..100
e-value: 0.004
score: 26.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..200
e-value: 4.8E-19
score: 70.5
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80846contigM-pyrifera_M_contig80846:34..708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80846.18914.1mRNA_M-pyrifera_M_contig80846.18914.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80846 34..708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80846.18914.1 ID=prot_M-pyrifera_M_contig80846.18914.1|Name=mRNA_M-pyrifera_M_contig80846.18914.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=203bp
RSQRHFVGHDGVVRLVALDPRGGALLASVSSPSATTATTTTTRANASPRI
RLWSYYAGRCLADLAAPERGCFALSFSHDGSELAVAGADRRGNPCILVWD
VSNALEQARADSASKPEPPFAPLRPPLLACPIVAHQSSDFSLVRVSFSPF
ERHKLVACGRENVRFLRVARGHLPSTSVVLNEHARGNVFLDVAFYEHATP
TPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf