prot_M-pyrifera_M_contig80834.18910.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80834.18910.1
Unique Nameprot_M-pyrifera_M_contig80834.18910.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length236
Homology
BLAST of mRNA_M-pyrifera_M_contig80834.18910.1 vs. uniprot
Match: A0A6P4ZNH9_BRABE (interferon-induced protein 44-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZNH9_BRABE)

HSP 1 Score: 66.2 bits (160), Expect = 5.770e-9
Identity = 67/257 (26.07%), Postives = 116/257 (45.14%), Query Frame = 0
Query:    4 VLYKWSTGNKSNAGLHASIDNQGATLHVIVTPEG-MFGGFASRPWSSTGGYQADTNSFVWRYRDGVL---RKFAATGNANHMHFS----GPIHFGDAHAIYLSLDNLPASHVRPCPARFS---GFTDASDLNPATAPF-----TVVDYLVFQVSDEDEY---VDRVNI--GRDWT----ASGRDELLRQAKAFQAYAPSLPNSEEYALNVLTIGERGSGKSSFLNAVVTTLRQRLTKTLHAAPSPGDVTTKQRNISL 235
            +L+K ST   ++A  H   +N+G T+ V     G +FGG+AS PW+S G Y    +SF++R  +       K  A     +  +     GP+ FG  H   +      A++     A  S   G+T  + +      F     + +D  V+ +   +E    +++  +  G++W     +    E L+Q  A   Y P + +S    +NVL +G+ GSGKSSF N + +  + R++    A   P  +TT+ R   +
Sbjct:   28 LLFKASTQGYNSATFHQLCNNKGPTVTVAYNAIGWVFGGYASEPWTSRGSYVQAPDSFLFRLSNANKFDPLKIPANQYVQNCLYDLQDRGPV-FGGGHDFQVFTGTYQANNGNFINANGSSNIGYTYGNGMGHNVNTFCGGNLSYLDVEVYSIGKREEKEVPIEKKMLQEGKEWRKVQWSDEERERLKQQVA--GYKPQVCSSVSQ-VNVLLVGQVGSGKSSFFNTINSIYKGRVSSQAMAGSQPHSLTTRYRTYEV 280          
BLAST of mRNA_M-pyrifera_M_contig80834.18910.1 vs. uniprot
Match: A0A8J9YXL7_BRALA (IFI44L protein n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A8J9YXL7_BRALA)

HSP 1 Score: 66.2 bits (160), Expect = 5.780e-9
Identity = 69/259 (26.64%), Postives = 110/259 (42.47%), Query Frame = 0
Query:    4 VLYKWSTGNKSNAGLHASIDNQGATLHVIVTPEG-MFGGFASRPWSSTGGYQADTNSFVWRYRDGVL---RKFAATGNANHMHFS----GPIHFGDAHAIYLSLDNLPASHVRPCPARFS---GFTDASDLNPATAPF-----TVVDYLVFQVSDEDEYVDRVNI-------GRDWT----ASGRDELLRQAKAFQAYAPSLPNSEEYALNVLTIGERGSGKSSFLNAVVTTLRQRLTKTLHAAPSPGDVTTKQRNISL 235
            +L+K ST   + A  H   +N+G T+ V     G +FGG+AS  W+S GG+    +SF++R  +       KF + G + H  +     GP  FG  H          A++     A  S   G T  + +      F       +D  V+ +   +   D   I       G++W     +    E L+Q  A     P L  S+   +NVL +G+ GSGKSSF N + +  + R++    A   P  +TT+ R   +
Sbjct:   28 LLFKASTQGYNPATFHQLCNNKGPTVTVAYNATGWVFGGYASESWTSRGGWVQAPDSFLFRLSNANKFDPLKFPSDGTSGHCQYDLQNYGPT-FGGGHDFAAFTGTYAANNGNFVAAGGSSNLGNTYGAGMGHNANSFCGNNLNYLDVEVYSIGKREAKEDGDPIEKRMMQEGKEWRKVQWSDEERERLKQQVAGYKPRPCLSLSQ---VNVLLVGQVGSGKSSFFNTINSIYKGRVSSQAMAGSQPHSLTTRYRTYEV 282          
BLAST of mRNA_M-pyrifera_M_contig80834.18910.1 vs. uniprot
Match: A0A815BXV0_ADIRI (Hypothetical protein n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A815BXV0_ADIRI)

HSP 1 Score: 56.6 bits (135), Expect = 8.730e-6
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    3 RVLYKWSTGNKSNAGLHASIDNQGATLHVIVTPEG-MFGGFASRPWSSTGGYQADTNSFVW 62
            ++LYK +    +    H   DNQG T+ ++ +    +FGG+AS PWSS GGY+ DTN+F++
Sbjct:  220 QLLYKATRDGFAANAFHTRCDNQGPTITIVQSSNNYLFGGYASTPWSSDGGYKEDTNAFLF 280          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80834.18910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6P4ZNH9_BRABE5.770e-926.07interferon-induced protein 44-like n=1 Tax=Branchi... [more]
A0A8J9YXL7_BRALA5.780e-926.64IFI44L protein n=2 Tax=Branchiostoma TaxID=7737 Re... [more]
A0A815BXV0_ADIRI8.730e-640.98Hypothetical protein n=1 Tax=Adineta ricciae TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006571TLDc domainPFAMPF07534TLDcoord: 5..110
e-value: 1.4E-8
score: 35.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80834contigM-pyrifera_M_contig80834:186..893 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80834.18910.1mRNA_M-pyrifera_M_contig80834.18910.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80834 186..893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80834.18910.1 ID=prot_M-pyrifera_M_contig80834.18910.1|Name=mRNA_M-pyrifera_M_contig80834.18910.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp
EVRVLYKWSTGNKSNAGLHASIDNQGATLHVIVTPEGMFGGFASRPWSST
GGYQADTNSFVWRYRDGVLRKFAATGNANHMHFSGPIHFGDAHAIYLSLD
NLPASHVRPCPARFSGFTDASDLNPATAPFTVVDYLVFQVSDEDEYVDRV
NIGRDWTASGRDELLRQAKAFQAYAPSLPNSEEYALNVLTIGERGSGKSS
FLNAVVTTLRQRLTKTLHAAPSPGDVTTKQRNISLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006571TLDc_dom