prot_M-pyrifera_M_contig80785.18900.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80785.18900.1
Unique Nameprot_M-pyrifera_M_contig80785.18900.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
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BLAST of mRNA_M-pyrifera_M_contig80785.18900.1 vs. uniprot
Match: D7FP49_ECTSI (Fimbrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP49_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 6.290e-57
Identity = 90/111 (81.08%), Postives = 100/111 (90.09%), Query Frame = 0 
Query:    1 QTVQLATFINARFKDEPLLASLLPVDGTNPDAFFDSWGDGRLLIVLVDAACEGAVDLAFLRRRARKPLGVSVRHLTIQHFAVLNDALEGCKNIEGLRLGFVGAEDFVQGNR 111
            +T QLATFINARF+DEPLL+++LPVDG  PD FF +WGDGRLLI LVDAACEG VDL F+RR+A KP GVSVRH TIQHFAVLNDAL+GCKNI+GLRLGFVGAEDFVQGNR
Sbjct:   27 ETYQLATFINARFEDEPLLSTILPVDGAKPDEFFGAWGDGRLLICLVDAACEGVVDLDFMRRKASKPQGVSVRHPTIQHFAVLNDALQGCKNIDGLRLGFVGAEDFVQGNR 137
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80785.18900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP49_ECTSI6.290e-5781.08Fimbrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP49... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 1..111
e-value: 8.7E-10
score: 40.5
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 3..111
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 1..111
score: 10.793

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80785contigM-pyrifera_M_contig80785:149..484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80785.18900.1mRNA_M-pyrifera_M_contig80785.18900.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80785 149..484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80785.18900.1 ID=prot_M-pyrifera_M_contig80785.18900.1|Name=mRNA_M-pyrifera_M_contig80785.18900.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
QTVQLATFINARFKDEPLLASLLPVDGTNPDAFFDSWGDGRLLIVLVDAA
CEGAVDLAFLRRRARKPLGVSVRHLTIQHFAVLNDALEGCKNIEGLRLGF
VGAEDFVQGNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036872CH_dom_sf
IPR001715CH-domain