prot_M-pyrifera_M_contig8065.18877.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8065.18877.1
Unique Nameprot_M-pyrifera_M_contig8065.18877.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length108
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8065.18877.1 vs. uniprot
Match: A0A6H5K7I3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7I3_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 2.300e-6
Identity = 27/87 (31.03%), Postives = 48/87 (55.17%), Query Frame = 0 
Query:   17 TGPEVFMLLLRLLSNHFDCTDTGVSYTKLNNFGVPNGTPFCDSSRAFRGVVSAATGTGRGLAPGMEVVLEVVRTAVNKQYPSLTPTL 103
            +GP  +  LL+LL++ ++         KL +FGVPNGTP+      F+ +  +   + R  AP + +V   +R A+ +QYP++  +L
Sbjct:  138 SGPSAYRRLLQLLTDEWEPKRFNRGIDKLQDFGVPNGTPYSKFVTKFKALAMSEIASHRAFAPDLRMVQRALRDALLEQYPNVLSSL 224
[Close]
BLAST of mRNA_M-pyrifera_M_contig8065.18877.1 vs. uniprot
Match: A0A6H5JDL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL4_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 5.390e-6
Identity = 31/104 (29.81%), Postives = 53/104 (50.96%), Query Frame = 0 
Query:    1 YGRYQQEVSRALAA-GSTGPEVFMLLLRLLSNHFDCTDTGVSYTKLNNFGVPNGTPFCDSSRAFRGVVSAATGTGRGLAPGMEVVLEVVRTAVNKQYPSLTPTL 103
            YG   ++V R L     TGP  +  LL+LL++ ++         KL +FGVPNGTP+      F+ +  +   + R  A  + +V   +R A+ +QY ++  +L
Sbjct:   58 YGPSSRQVKRFLETKDKTGPSAYRRLLKLLADEWEPKGFNRGIDKLQDFGVPNGTPYSKFVTKFKALAMSELASHRAFAQDLRMVQRALRDALLEQYLNVLSSL 161
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8065.18877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K7I3_9PHAE2.300e-631.03Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JDL4_9PHAE5.390e-629.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8065contigM-pyrifera_M_contig8065:10531..10854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8065.18877.1mRNA_M-pyrifera_M_contig8065.18877.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8065 10531..10856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8065.18877.1 ID=prot_M-pyrifera_M_contig8065.18877.1|Name=mRNA_M-pyrifera_M_contig8065.18877.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
YGRYQQEVSRALAAGSTGPEVFMLLLRLLSNHFDCTDTGVSYTKLNNFGV
PNGTPFCDSSRAFRGVVSAATGTGRGLAPGMEVVLEVVRTAVNKQYPSLT
PTLYPGSL
back to top