prot_M-pyrifera_M_contig8061.18871.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8061.18871.1
Unique Nameprot_M-pyrifera_M_contig8061.18871.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length162
Homology
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BLAST of mRNA_M-pyrifera_M_contig8061.18871.1 vs. uniprot
Match: D7G4C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4C1_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 1.820e-14
Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 0 
Query:    2 IKQLQLTCTSVCSDCRASSVFHVRVVSRTPRRLWTTARGPNRRRRSGKGAGVPGLPPLRVGRLTFGEYYNRAISAVALPSELTK 85
            +KQLQL   S+CS+ RA + FH+RVV RTP+RLWTT         +GK  G  G+PP+RV  LTF EY+  A+  V   + L K
Sbjct:   11 VKQLQLASLSICSESRACTAFHLRVVRRTPKRLWTTTSS------TGKRVGTDGVPPMRVDWLTFREYFEPAVRNVVWRAGLRK 88
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8061.18871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4C1_ECTSI1.820e-1447.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 70..112
e-value: 5.4E-5
score: 23.3
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 59..155
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 59..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8061contigM-pyrifera_M_contig8061:5665..6150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8061.18871.1mRNA_M-pyrifera_M_contig8061.18871.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8061 5665..6150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8061.18871.1 ID=prot_M-pyrifera_M_contig8061.18871.1|Name=mRNA_M-pyrifera_M_contig8061.18871.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
VIKQLQLTCTSVCSDCRASSVFHVRVVSRTPRRLWTTARGPNRRRRSGKG
AGVPGLPPLRVGRLTFGEYYNRAISAVALPSELTKVTFGKRFNQDLKCVR
WPSTLAEVRFGCNFDSPIAGMTWPTGLQRVMFGCGFNQSIDGLLWPAGLQ
EIVLGGAFNKPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP