prot_M-pyrifera_M_contig80600.18870.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80600.18870.1
Unique Nameprot_M-pyrifera_M_contig80600.18870.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length83
Homology
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BLAST of mRNA_M-pyrifera_M_contig80600.18870.1 vs. uniprot
Match: D7G5M9_ECTSI (STI1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M9_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.840e-23
Identity = 44/57 (77.19%), Postives = 52/57 (91.23%), Query Frame = 0 
Query:   26 GKIMNNPKAMEAFQKAQGSPKVMAAIQDVTQNGMGAIAKYRNDPEILAVIEELKAMF 82
            GK+MNNPKAMEAFQKAQ +  VMAAIQDVTQNGM A++KY++DPEILA+IEELK +F
Sbjct:   29 GKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 85
[Close]
BLAST of mRNA_M-pyrifera_M_contig80600.18870.1 vs. uniprot
Match: D7G4D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D5_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.440e-20
Identity = 44/57 (77.19%), Postives = 52/57 (91.23%), Query Frame = 0 
Query:   26 GKIMNNPKAMEAFQKAQGSPKVMAAIQDVTQNGMGAIAKYRNDPEILAVIEELKAMF 82
            GK+MNNPKAMEAFQKAQ +  VMAAIQDVTQNGM A++KY++DPEILA+IEELK +F
Sbjct:  831 GKMMNNPKAMEAFQKAQSNXXVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 887
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80600.18870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5M9_ECTSI1.840e-2377.19STI1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G4D5_ECTSI1.440e-2077.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041243STI1 domainPFAMPF17830STI1coord: 23..78
e-value: 3.4E-8
score: 33.3
NoneNo IPR availableGENE3D1.10.260.100coord: 22..82
e-value: 1.9E-16
score: 61.7
NoneNo IPR availablePANTHERPTHR47296FAMILY NOT NAMEDcoord: 22..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80600contigM-pyrifera_M_contig80600:355..924 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80600.18870.1mRNA_M-pyrifera_M_contig80600.18870.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80600 355..924 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80600.18870.1 ID=prot_M-pyrifera_M_contig80600.18870.1|Name=mRNA_M-pyrifera_M_contig80600.18870.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=83bp
GGAVGGRGGGEGGGWGGGGGMGDMLGKIMNNPKAMEAFQKAQGSPKVMAA
IQDVTQNGMGAIAKYRNDPEILAVIEELKAMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041243STI1