prot_M-pyrifera_M_contig80501.18860.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80501.18860.1
Unique Nameprot_M-pyrifera_M_contig80501.18860.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length58
Homology
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BLAST of mRNA_M-pyrifera_M_contig80501.18860.1 vs. uniprot
Match: A0A1G0PFD0_9BACT (Uncharacterized protein n=1 Tax=Ignavibacteria bacterium GWB2_35_6b TaxID=1798424 RepID=A0A1G0PFD0_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 1.460e-8
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 0 
Query:    1 YDSNNVEHQLIKSTIDKYHKGLTMGDGDLVTKALADQFFMYNGNYSGDAINWQAHMYL 58
            Y  N  +  L K  +  +  G+   + +L+  ++ + F M+NGNYSGD +NWQAHMYL
Sbjct:   31 YFLNESDSVLAKQAVTNFQTGIINNNAELLKNSVWEDFIMFNGNYSGDPVNWQAHMYL 88
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80501.18860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1G0PFD0_9BACT1.460e-839.66Uncharacterized protein n=1 Tax=Ignavibacteria bac... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80501contigM-pyrifera_M_contig80501:758..931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80501.18860.1mRNA_M-pyrifera_M_contig80501.18860.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80501 758..931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80501.18860.1 ID=prot_M-pyrifera_M_contig80501.18860.1|Name=mRNA_M-pyrifera_M_contig80501.18860.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=58bp
YDSNNVEHQLIKSTIDKYHKGLTMGDGDLVTKALADQFFMYNGNYSGDAI
NWQAHMYL
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