prot_M-pyrifera_M_contig7812.18362.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7812.18362.1
Unique Nameprot_M-pyrifera_M_contig7812.18362.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length109
Homology
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Match: D7FKS2_ECTSI (50S ribosomal protein l19-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS2_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 3.700e-60
Identity = 92/107 (85.98%), Postives = 103/107 (96.26%), Query Frame = 0
Query:    1 MKIGDAIEVTMYTNKKASRTTQVRGVLVRKVNKGIDSTILLRDVINGNSVESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRELDQKYYRITGGGGSE 107
            MKIGDAIEVTMY NKKA+RT+QVRGVL+RKVNKGIDS+ILLRDVINGN VE HIPLFSPL++S++VMETAFIYQGKL+GKRVRPARIYYIR+LDQK YRITGGGGS+
Sbjct:  114 MKIGDAIEVTMYANKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRITGGGGSD 220          
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Match: A0A835ZJ13_9STRA (Translation protein SH3-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ13_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.850e-25
Identity = 46/101 (45.54%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    2 KIGDAIEVTMYTNKKASRTTQVRGVLVRKVNKGIDSTILLRDVINGNSVESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRELDQKYYRITG 102
            K GDAIE  M     A +   VRG+++ +  +GI S+ ++RDV+   ++E  +PL+SPL++SI V++   IY+GK +GKRVRP++IYY+R LD KY ++TG
Sbjct:   85 KTGDAIECQMLPYMTAPKAEPVRGIVLGRFKRGIASSFIVRDVLYDEAIERRVPLYSPLLKSITVLKRRAIYEGKQEGKRVRPSKIYYLRNLDNKYSQVTG 185          
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Match: B8BTE2_THAPS (50S ribosomal protein l19-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTE2_THAPS)

HSP 1 Score: 87.0 bits (214), Expect = 2.800e-19
Identity = 40/105 (38.10%), Postives = 72/105 (68.57%), Query Frame = 0
Query:    2 KIGDAIEVTMYT-----NKKASRTTQVRGVLVRKVNKGIDSTILLRDVINGNSVESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRELDQKYYRIT 101
            K+GDA+E+ +       N +  +  ++RGV++ + N+G+D++I L+DV+ G  VE  I L SP++++++V+E  F+ +GK KGKRVR A++YY+R+   +  R+T
Sbjct:   46 KVGDAVELQVLDSGGVDNPQNKKLDKIRGVVLGRENRGMDTSIYLKDVLFGEHVERKIKLHSPMVKTLKVLEEGFVNRGKRKGKRVRRAKLYYLRDRKPEETRVT 150          
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Match: A0A7S2P9J5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P9J5_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.360e-19
Identity = 40/105 (38.10%), Postives = 71/105 (67.62%), Query Frame = 0
Query:    2 KIGDAIEVTMYT-----NKKASRTTQVRGVLVRKVNKGIDSTILLRDVINGNSVESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRELDQKYYRIT 101
            K+GDA+E+ +       N +  R  ++RGV++ + NKG+D+ I L+DV+ G  VE  + L SP+++S++V+E  F+ +GK KG+RV+ A++YY+R+   +  R+T
Sbjct:   60 KVGDAVELEVLDSGGVQNPQNKRYDKIRGVVLGRENKGLDTGIYLKDVLFGEHVERKVKLHSPMVKSLKVLEEGFVNRGKKKGRRVKRAKLYYLRDRKPEETRVT 164          
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Match: A0A7S1GN95_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GN95_CYCTE)

HSP 1 Score: 85.5 bits (210), Expect = 1.400e-18
Identity = 39/102 (38.24%), Postives = 71/102 (69.61%), Query Frame = 0
Query:    2 KIGDAIEVTMYTNKKA--SRTTQVRGVLVRKVNKGIDSTILLRDVINGNSVESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRELDQKYYRIT 101
            ++GD++E+ M         +  +VRG+++ KVN+G+ S++++RDV+ G  VE  IPL+SP+++S++++E  F+++GK K KR   A++YY+RE     YR+T
Sbjct:   85 RVGDSVELEMVGEGGTLEGKLEKVRGLVIGKVNRGLASSLIVRDVVFGEPVEWKIPLYSPMVKSLKILERNFVFKGKRKVKR---AKLYYLRERSPNEYRVT 183          
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Match: A0A8J9SNI4_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SNI4_PHATR)

HSP 1 Score: 81.6 bits (200), Expect = 4.350e-18
Identity = 39/93 (41.94%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    2 KIGDAIEVTMYTNK--KASRTTQVRGVLVRKVNKGIDSTILLRDVINGNSVESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRE 92
            ++GDAIE+ M ++   K+  T  +RGV++    + +D+T+LLRDV+ G  +E  +PL SPL+ S++V+E  FIY+GK K KR   A++Y++R+
Sbjct:    1 RVGDAIEIEMVSDGGVKSDDTDLIRGVVIGITRRALDTTVLLRDVVFGEPIERRVPLHSPLLRSLKVLEENFIYKGKRKVKR---AKLYFLRD 90          
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Match: K0SBD7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBD7_THAOC)

HSP 1 Score: 84.3 bits (207), Expect = 2.290e-17
Identity = 40/105 (38.10%), Postives = 70/105 (66.67%), Query Frame = 0
Query:    2 KIGDAIEVTMYT-----NKKASRTTQVRGVLVRKVNKGIDSTILLRDVINGNSVESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRELDQKYYRIT 101
            K+GDA+E+ +       N       ++RGV++ + NKG+D++I LRDV+ G  VE  + L SPL++S++V+E  F+ +G+ KG+RV+ A++YY+R+   +  R+T
Sbjct:  175 KVGDAVELEILDSGGVDNPNNRPLEKIRGVVLGRHNKGLDTSINLRDVLFGEPVERKVKLHSPLVKSLKVLEEGFVNRGRRKGRRVKRAKLYYLRDRKPEETRVT 279          
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Match: A0A7S2ID41_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ID41_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.950e-16
Identity = 38/103 (36.89%), Postives = 70/103 (67.96%), Query Frame = 0
Query:    2 KIGDAIEVTMYTNKKASRTT---QVRGVLVRKVNKGIDSTILLRDVINGNSVESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRELDQKYYRIT 101
            ++GDAIE+ + +    + T+   ++RGV++ K NKG+ S++ +RDV+ G  ++  +PL SPL++S++V+E  F+++GK K KR   A++YY+R+      R+T
Sbjct:   44 RVGDAIEIELISMGGVNSTSNIDKIRGVVLGKSNKGLGSSVQIRDVMYGEPIDRQVPLHSPLLKSLKVLEKNFVHKGKKKVKR---AKLYYLRDRLPVETRVT 143          
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Match: A0A1Z5JBA1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBA1_FISSO)

HSP 1 Score: 79.7 bits (195), Expect = 2.470e-16
Identity = 39/101 (38.61%), Postives = 69/101 (68.32%), Query Frame = 0
Query:    2 KIGDAIEVTM-YTNKKASRTTQVRGVLVRKVNKGIDSTILLRDVINGNSVESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRELDQKYYRIT 101
            ++GDAIE+ +   N + +   ++RGV++    KG+D ++LLRDV+ G  VE  I L SPL++S++++E  F+Y+GK K KR   A++Y++R+ + +  R+T
Sbjct:   87 RVGDAIELVIGRENAEKNEIEKIRGVVLGISRKGLDHSVLLRDVVFGQPVERRILLHSPLLQSVKLLEENFVYKGKRKVKR---AKLYFLRDRNPELTRVT 184          
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Match: A0A7R9UET9_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.340e-16
Identity = 32/97 (32.99%), Postives = 61/97 (62.89%), Query Frame = 0
Query:    2 KIGDAIEVTMYTNKKASRTTQVRGVLVRKVNKGIDSTILLRDVINGNSVESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRELDQKYY 98
            ++GD + V+    K   +     GV++    KG+D +IL+R V+ G+  E  +PL+SPL+++++++E   I++GK  G+RVR +++YY+R  +   Y
Sbjct:  104 RVGDKVRVSFLQAKSEEKPDDYVGVIIANPKKGVDESILVRGVVKGDCFEVRVPLWSPLLKAVEILEPRCIHKGKKAGRRVRRSKLYYLRNREPSTY 200          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7812.18362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKS2_ECTSI3.700e-6085.9850S ribosomal protein l19-like protein n=2 Tax=Ect... [more]
A0A835ZJ13_9STRA1.850e-2545.54Translation protein SH3-like domain-containing pro... [more]
B8BTE2_THAPS2.800e-1938.1050S ribosomal protein l19-like protein n=1 Tax=Tha... [more]
A0A7S2P9J5_9STRA3.360e-1938.10Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1GN95_CYCTE1.400e-1838.24Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J9SNI4_PHATR4.350e-1841.94Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
K0SBD7_THAOC2.290e-1738.10Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2ID41_9STRA1.950e-1636.89Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1Z5JBA1_FISSO2.470e-1638.61Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7R9UET9_9STRA3.340e-1632.99Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001857Ribosomal protein L19PRINTSPR00061RIBOSOMALL19coord: 14..43
score: 24.17
coord: 44..67
score: 31.42
IPR001857Ribosomal protein L19PFAMPF01245Ribosomal_L19coord: 1..100
e-value: 7.2E-24
score: 83.9
IPR001857Ribosomal protein L19PANTHERPTHR15680RIBOSOMAL PROTEIN L19coord: 2..100
IPR038657Ribosomal protein L19 superfamilyGENE3D2.30.30.790coord: 1..101
e-value: 1.1E-15
score: 59.5
NoneNo IPR availablePANTHERPTHR15680:SF939S RIBOSOMAL PROTEIN L19, MITOCHONDRIALcoord: 2..100
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 2..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7812contigM-pyrifera_M_contig7812:852..4181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7812.18362.1mRNA_M-pyrifera_M_contig7812.18362.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7812 846..4217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7812.18362.1 ID=prot_M-pyrifera_M_contig7812.18362.1|Name=mRNA_M-pyrifera_M_contig7812.18362.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
MKIGDAIEVTMYTNKKASRTTQVRGVLVRKVNKGIDSTILLRDVINGNSV
ESHIPLFSPLMESIQVMETAFIYQGKLKGKRVRPARIYYIRELDQKYYRI
TGGGGSEY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001857Ribosomal_L19
IPR038657L19_sf
IPR008991Translation_prot_SH3-like_sf