prot_M-pyrifera_M_contig78072.18353.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig78072.18353.1
Unique Name	prot_M-pyrifera_M_contig78072.18353.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	331

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Match: A0A359ELS0_9GAMM (Transcription-repair-coupling factor n=3 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A359ELS0_9GAMM)

HSP 1 Score: 630 bits (1624), Expect = 1.910e-217
Identity = 322/331 (97.28%), Postives = 327/331 (98.79%), Query Frame = 0

Query:    1 FCFELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVDVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 331
            FCFELPALEYEQF+ASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTV+VVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRET LEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGR   +++
Sbjct:  584 FCFELPALEYEQFAASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVEVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETELEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRGSQKSF 914

[Close]

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Match: A0A2E7C143_9GAMM (Transcription-repair-coupling factor n=10 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C143_9GAMM)

HSP 1 Score: 626 bits (1615), Expect = 1.780e-214
Identity = 317/331 (95.77%), Postives = 326/331 (98.49%), Query Frame = 0

Query:    1 FCFELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVDVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 331
            FCFELPALEYEQF+ASFPFEETADQAAAI+AVI DMTA RVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQH+NSFADRFADWPVTV+VVSRFKSGKDLGGVLQRV++G IDIL+GTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLS+IATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIG+AHGQMRE  LEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY
Sbjct:  584 FCFELPALEYEQFAASFPFEETADQAAAIDAVIADMTAERVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHFNSFADRFADWPVTVEVVSRFKSGKDLGGVLQRVSNGDIDILIGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSVIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGVAHGQMREAELEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 914

[Close]

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Match: A0A2D5FES0_9GAMM (Transcription-repair-coupling factor n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FES0_9GAMM)

HSP 1 Score: 595 bits (1535), Expect = 1.780e-202
Identity = 301/331 (90.94%), Postives = 317/331 (95.77%), Query Frame = 0

Query:    1 FCFELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVDVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 331
            FCFELPALEYEQF+ASFPFEETADQAA+I+AVI DMT+ RVMDRLVCGDVGFGKTEVAMRAAFIAARN KQVAVLVPTTLLAQQHYNSFADRFADWPVTV++VSRF+SGK++  VL R+  G IDILVGTHKLLS +FRF DLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVK+I+EA RKLRELLPDLSIG+AHGQMRET LEQVMSAFYHQRHHILLCTTIIETGID+P ANTIIIERAD+FGLAQLHQLRGRVGRSHHQAY
Sbjct:  584 FCFELPALEYEQFAASFPFEETADQAASIQAVIDDMTSPRVMDRLVCGDVGFGKTEVAMRAAFIAARNAKQVAVLVPTTLLAQQHYNSFADRFADWPVTVEMVSRFRSGKEMDAVLARLERGDIDILVGTHKLLSKEFRFADLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKTIQEAARKLRELLPDLSIGVAHGQMRETELEQVMSAFYHQRHHILLCTTIIETGIDIPNANTIIIERADRFGLAQLHQLRGRVGRSHHQAY 914

[Close]

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Match: A0A2N5Y1E1_9GAMM (Transcription-repair-coupling factor n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y1E1_9GAMM)

HSP 1 Score: 580 bits (1495), Expect = 1.740e-196
Identity = 292/331 (88.22%), Postives = 309/331 (93.35%), Query Frame = 0

Query:    1 FCFELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVDVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 331
            F FELP  EYE+FSASFPFEETADQAAAI AVI DMT+ RVMDRLVCGDVGFGKTEVAMRAAFIAA+NGKQVA+LVPTTLLAQQH++SF+DRFADWPVTVDV+SRFKSGK    V QR A G ++IL+GTHKLL  DF+F DLGLLIIDEEHRFGVKQKE IKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIAL+REAVLRETLRGGQVYYLHNEV++IEE  RKLRELLPDLSIG+AHGQMRET LEQVMSAFYHQRHHILLCTTIIETGID+P ANTIIIERADKFGLAQLHQLRGRVGRSHHQAY
Sbjct:  584 FRFELPIPEYEEFSASFPFEETADQAAAISAVIDDMTSPRVMDRLVCGDVGFGKTEVAMRAAFIAAQNGKQVAILVPTTLLAQQHFSSFSDRFADWPVTVDVLSRFKSGKQTDAVAQRAASGEVNILIGTHKLLQRDFKFKDLGLLIIDEEHRFGVKQKETIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALVREAVLRETLRGGQVYYLHNEVRTIEETARKLRELLPDLSIGVAHGQMRETQLEQVMSAFYHQRHHILLCTTIIETGIDIPNANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 914

[Close]

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Match: A0A7V0ZMX1_9GAMM (Transcription-repair-coupling factor n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A7V0ZMX1_9GAMM)

HSP 1 Score: 560 bits (1444), Expect = 5.000e-192
Identity = 284/331 (85.80%), Postives = 298/331 (90.03%), Query Frame = 0

Query:    1 FCFELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVDVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 331
            F F+     YEQF A+FPFEET DQA  I AVI DM + RVMDRLVCGDVGFGKTEVAMRAAF+A  N KQVAVLVPTTLLAQQHYNSF DRFADWPVTV+VVSRFKS K L  + + VA G IDILVGTHKLL SDFRF DLGLLIIDEEHRFGVKQKE IKALR+EVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIAL++EAVLRETLRGGQVYYLHNEVK+IEE  RKLRELLPDLSIG+AHGQMRET LEQVMSAFYH+RHHILLCTTIIETGID+P ANTIIIERADKFGLAQLHQLRGRVGRSHHQAY
Sbjct:  319 FAFKREVHSYEQFCAAFPFEETPDQAVTINAVIEDMHSGRVMDRLVCGDVGFGKTEVAMRAAFVATHNNKQVAVLVPTTLLAQQHYNSFCDRFADWPVTVEVVSRFKSAKQLADITRAVASGDIDILVGTHKLLQSDFRFDDLGLLIIDEEHRFGVKQKEVIKALRSEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALVKEAVLRETLRGGQVYYLHNEVKTIEETARKLRELLPDLSIGVAHGQMRETQLEQVMSAFYHRRHHILLCTTIIETGIDIPNANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 649

[Close]

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Match: A0A661H2B0_9GAMM (Transcription-repair-coupling factor n=4 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661H2B0_9GAMM)

HSP 1 Score: 564 bits (1454), Expect = 2.380e-190
Identity = 286/331 (86.40%), Postives = 302/331 (91.24%), Query Frame = 0

Query:    1 FCFELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVDVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 331
            F FE     YEQFSA+FPFEET DQA  I AVI DM + RVMDRLVCGDVGFGKTEVAMRAAF+A RN KQVAVLVPTTLLAQQHYNSF DRFADWPVTV+VVSRFKS K L  V++ VA G IDILVGTHKLL S+F+F DLGLLIIDEEHRFGVKQKE IKALR+EVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIAL++EAVLRETLRGGQVYYLHNEVK+IEE+ RKLRELLPDLSIG+AHGQMRET LEQVMSAFYH+RHHILLCTTIIETGID+P ANTIIIERADKFGLAQLHQLRGRVGRSHHQAY
Sbjct:  584 FAFERELHSYEQFSAAFPFEETPDQAVTINAVIEDMHSGRVMDRLVCGDVGFGKTEVAMRAAFVATRNNKQVAVLVPTTLLAQQHYNSFCDRFADWPVTVEVVSRFKSAKQLADVMRAVASGDIDILVGTHKLLQSNFKFDDLGLLIIDEEHRFGVKQKEVIKALRSEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALVKEAVLRETLRGGQVYYLHNEVKTIEESARKLRELLPDLSIGVAHGQMRETQLEQVMSAFYHRRHHILLCTTIIETGIDIPNANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 914

[Close]

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Match: A0A7W2TUB2_9GAMM (Transcription-repair-coupling factor n=1 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2TUB2_9GAMM)

HSP 1 Score: 563 bits (1452), Expect = 4.730e-190
Identity = 281/331 (84.89%), Postives = 309/331 (93.35%), Query Frame = 0

Query:    1 FCFELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVDVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 331
            F FE+PALEY+QF+A+FPFEET DQ + I AV+ DM++ RVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQH++SF+DRFADWP+TV+VVSRFK+GK L  V +RVADG IDILVGTHKLL  DF++ DLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMA+GGMRDLSIIATPPARRLSIKTFVREHNIALI+EAVLRETLRGGQVYYLHNEVK+IE+   KLRELLP+LSI +AHGQM+E+ LEQVMSAFYH+ HHILLCTTIIETGID+P ANTIIIERAD+FGLAQLHQLRGRVGRSHHQAY
Sbjct:  584 FQFEIPALEYQQFAATFPFEETFDQESTIAAVLDDMSSPRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHFSSFSDRFADWPITVEVVSRFKTGKQLTAVSKRVADGEIDILVGTHKLLQQDFKYKDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMAIGGMRDLSIIATPPARRLSIKTFVREHNIALIKEAVLRETLRGGQVYYLHNEVKTIEQTASKLRELLPELSIAVAHGQMQESQLEQVMSAFYHKHHHILLCTTIIETGIDIPNANTIIIERADRFGLAQLHQLRGRVGRSHHQAY 914

[Close]

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Match: UPI0019D329B6 (transcription-repair coupling factor n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D329B6)

HSP 1 Score: 562 bits (1448), Expect = 1.870e-189
Identity = 280/329 (85.11%), Postives = 307/329 (93.31%), Query Frame = 0

Query:    3 FELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVDVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 331
            F++P  +YEQF+ASFPFEETADQAAAI+AV+ DM + +VMDRLVCGDVGFGKTEVAMRAAF+AA N KQVAVLVPTTLLAQQH++SF+DRFADWP  V+VVSRFKSGKDL  V +RVA+G IDILVGTHKLL +DF F DLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGG+RDLSIIATPPARRLSIKTFVREHNIALI+EAVLRETLRGGQVYYLHNEVK+IE+  RKLRELLP+LS+ +AHGQMRE  LEQVMSAFYHQ+HHILLCTTI+ETGID+P ANTIIIERAD+FGLAQLHQLRGRVGRSHHQAY
Sbjct:  586 FDIPRADYEQFAASFPFEETADQAAAIDAVLADMASGQVMDRLVCGDVGFGKTEVAMRAAFVAASNRKQVAVLVPTTLLAQQHFSSFSDRFADWPFNVEVVSRFKSGKDLAAVSKRVAEGEIDILVGTHKLLQTDFGFKDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGLRDLSIIATPPARRLSIKTFVREHNIALIKEAVLRETLRGGQVYYLHNEVKTIEQTARKLRELLPELSVAVAHGQMREHQLEQVMSAFYHQQHHILLCTTIVETGIDIPNANTIIIERADRFGLAQLHQLRGRVGRSHHQAY 914

[Close]

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Match: A0A2E0Z0K4_9GAMM (Transcription-repair-coupling factor n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0Z0K4_9GAMM)

HSP 1 Score: 557 bits (1435), Expect = 1.600e-187
Identity = 276/331 (83.38%), Postives = 302/331 (91.24%), Query Frame = 0

Query:    1 FCFELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVDVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 331
            F F     +Y +F A+FPFEET DQ  AI+AV+ DM + RVMDRLVCGDVGFGKTEVA+RAAF+AAR GKQVAVLVPTTLLAQQHYN+F+DRFADWPV+V++VSRF+SG +   +LQR A G +DIL+GTHKLL SDFRFHDLGLLIIDEEHRFGVKQKE IKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHN+ALI+EAVLRETLRGGQVYYLHNEVK+IEE  RKLRELLPD+SI +AHGQMRET LEQVMSAFYHQRHH+LLCTTIIETGID+P ANTIIIERAD+FGLAQLHQLRGRVGRSHHQAY
Sbjct:  581 FAFRRDDADYLKFCAAFPFEETPDQEEAIDAVLDDMCSERVMDRLVCGDVGFGKTEVALRAAFVAARQGKQVAVLVPTTLLAQQHYNTFSDRFADWPVSVEMVSRFRSGSESQRILQRAASGKLDILIGTHKLLQSDFRFHDLGLLIIDEEHRFGVKQKEVIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNVALIKEAVLRETLRGGQVYYLHNEVKTIEETARKLRELLPDMSIAVAHGQMRETELEQVMSAFYHQRHHVLLCTTIIETGIDIPNANTIIIERADRFGLAQLHQLRGRVGRSHHQAY 911

[Close]

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Match: A0A2N5X4U0_9GAMM (Transcription-repair-coupling factor n=1 Tax=Pseudohalioglobus lutimaris TaxID=1737061 RepID=A0A2N5X4U0_9GAMM)

HSP 1 Score: 555 bits (1431), Expect = 6.510e-187
Identity = 278/331 (83.99%), Postives = 303/331 (91.54%), Query Frame = 0

Query:    1 FCFELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDVGFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTVDVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDEEHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLRELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 331
            F FE+  + Y+QFSA+FPFEET DQ   I+AVI DM   RVMDRLVCGDVGFGKTEVAMRAAF+A +N KQVAVLVPTTLLAQQH++SF+DRFADWPV V+VVSRFKS   +  V +R+A+G IDILVGTHKLL SDF F DLGLLIIDEEHRFGVKQKEAIKALR+EVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHN+ALI+EAVLRETLRGGQVYYLHNEVKSIEE+ RKLREL+P+L++G+AHGQMRET LEQVMSAFYHQRHHILLCTTIIETGID+P ANTIIIERADKFGLAQLHQLRGRVGRSHHQAY
Sbjct:  584 FAFEVDPITYDQFSAAFPFEETPDQEVTIKAVIDDMRNPRVMDRLVCGDVGFGKTEVAMRAAFVATQNRKQVAVLVPTTLLAQQHFSSFSDRFADWPVNVEVVSRFKSAAQMREVSKRIAEGKIDILVGTHKLLQSDFHFDDLGLLIIDEEHRFGVKQKEAIKALRSEVDILTLTATPIPRTLNMALGGMRDLSIIATPPARRLSIKTFVREHNVALIKEAVLRETLRGGQVYYLHNEVKSIEESARKLRELVPELTVGVAHGQMRETELEQVMSAFYHQRHHILLCTTIIETGIDIPNANTIIIERADKFGLAQLHQLRGRVGRSHHQAY 914

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig78072.18353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A359ELS0_9GAMM	1.910e-217	97.28	Transcription-repair-coupling factor n=3 Tax=Halie...	[more]
A0A2E7C143_9GAMM	1.780e-214	95.77	Transcription-repair-coupling factor n=10 Tax=Hali...	[more]
A0A2D5FES0_9GAMM	1.780e-202	90.94	Transcription-repair-coupling factor n=2 Tax=Halie...	[more]
A0A2N5Y1E1_9GAMM	1.740e-196	88.22	Transcription-repair-coupling factor n=1 Tax=Kineo...	[more]
A0A7V0ZMX1_9GAMM	5.000e-192	85.80	Transcription-repair-coupling factor n=1 Tax=Halie...	[more]
A0A661H2B0_9GAMM	2.380e-190	86.40	Transcription-repair-coupling factor n=4 Tax=Gamma...	[more]
A0A7W2TUB2_9GAMM	4.730e-190	84.89	Transcription-repair-coupling factor n=1 Tax=Sedim...	[more]
UPI0019D329B6	1.870e-189	85.11	transcription-repair coupling factor n=1 Tax=Parah...	[more]
A0A2E0Z0K4_9GAMM	1.600e-187	83.38	Transcription-repair-coupling factor n=1 Tax=Halio...	[more]
A0A2N5X4U0_9GAMM	6.510e-187	83.99	Transcription-repair-coupling factor n=1 Tax=Pseud...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 17..207 e-value: 5.0E-31 score: 119.1
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 35..196 score: 22.946
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 243..327 e-value: 4.7E-17 score: 72.6
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 223..326 e-value: 5.7E-16 score: 58.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 217..331 score: 12.615
None	No IPR available	GENE3D	3.40.50.300		coord: 1..198 e-value: 7.1E-78 score: 263.1
None	No IPR available	GENE3D	3.40.50.300		coord: 206..331 e-value: 1.3E-32 score: 114.6
None	No IPR available	PANTHER	PTHR14025:SF29	TRANSCRIPTION-REPAIR-COUPLING FACTOR	coord: 9..331
None	No IPR available	PANTHER	PTHR14025	FAMILY NOT NAMED	coord: 9..331
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 22..182 e-value: 2.8E-18 score: 66.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 140..330
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..200

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig78072	contig	M-pyrifera_M_contig78072:1..993 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig78072.18353.1	mRNA_M-pyrifera_M_contig78072.18353.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig78072 1..993 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig78072.18353.1 ID=prot_M-pyrifera_M_contig78072.18353.1|Name=mRNA_M-pyrifera_M_contig78072.18353.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=331bp
FCFELPALEYEQFSASFPFEETADQAAAIEAVIGDMTATRVMDRLVCGDV
GFGKTEVAMRAAFIAARNGKQVAVLVPTTLLAQQHYNSFADRFADWPVTV
DVVSRFKSGKDLGGVLQRVADGAIDILVGTHKLLSSDFRFHDLGLLIIDE
EHRFGVKQKEAIKALRAEVDILTLTATPIPRTLNMALGGMRDLSIIATPP
ARRLSIKTFVREHNIALIREAVLRETLRGGQVYYLHNEVKSIEEAGRKLR
ELLPDLSIGIAHGQMRETALEQVMSAFYHQRHHILLCTTIIETGIDVPTA
NTIIIERADKFGLAQLHQLRGRVGRSHHQAY

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014001	Helicase_ATP-bd
IPR001650	Helicase_C
IPR011545	DEAD/DEAH_box_helicase_dom
IPR027417	P-loop_NTPase