prot_M-pyrifera_M_contig77990.18345.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77990.18345.1
Unique Nameprot_M-pyrifera_M_contig77990.18345.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length140
Homology
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BLAST of mRNA_M-pyrifera_M_contig77990.18345.1 vs. uniprot
Match: A0A5B1QR39_9AGAM (ARM repeat-containing protein n=1 Tax=Dentipellis sp. KUC8613 TaxID=1883078 RepID=A0A5B1QR39_9AGAM)

HSP 1 Score: 54.3 bits (129), Expect = 8.870e-6
Identity = 31/136 (22.79%), Postives = 68/136 (50.00%), Query Frame = 0 
Query:    3 EVEGVLDAFLRATPDTFTAIDGEVQSMCTHEGVPVILAGMLVDGASRAQVRQLAGSLIRTQVIEKHWTRFTE---------EERSEVRSILLQGLRGEFSWLRTACARALGAISENDFPSTWPGFLEEVGKVLDEG 129
            ++  +L + L + P+   A + ++    T+    + LA ++    +   +RQ++  ++  + +E+HW+ F +         E +S++R+I+ QGL      +R+ CA  L  I+ +D+P  +P  L  +  +L  G
Sbjct:    6 DIAQLLTSTLNSDPNVRIAAELKLSESLTNPQSALSLAQLIHAQDADLSLRQISSHILLRKYVEEHWSPFFQQFKGNAPPVEVKSQIRTIVFQGLSDPIRKIRSLCAHTLSTIAMSDWPDEYPDLLTSLLGLLSSG 141
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77990.18345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5B1QR39_9AGAM8.870e-622.79ARM repeat-containing protein n=1 Tax=Dentipellis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..140
e-value: 6.4E-16
score: 59.5
IPR001494Importin-beta, N-terminal domainPFAMPF03810IBN_Ncoord: 30..88
e-value: 1.9E-7
score: 30.9
IPR001494Importin-beta, N-terminal domainPROSITEPS50166IMPORTIN_B_NTcoord: 22..90
score: 9.147
NoneNo IPR availablePANTHERPTHR10997:SF9IMPORTIN-9coord: 27..140
NoneNo IPR availablePANTHERPTHR10997IMPORTIN-7, 8, 11coord: 27..140
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77990contigM-pyrifera_M_contig77990:6..425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77990.18345.1mRNA_M-pyrifera_M_contig77990.18345.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77990 6..425 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77990.18345.1 ID=prot_M-pyrifera_M_contig77990.18345.1|Name=mRNA_M-pyrifera_M_contig77990.18345.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp
MDEVEGVLDAFLRATPDTFTAIDGEVQSMCTHEGVPVILAGMLVDGASRA
QVRQLAGSLIRTQVIEKHWTRFTEEERSEVRSILLQGLRGEFSWLRTACA
RALGAISENDFPSTWPGFLEEVGKVLDEGGVGVDGGMRCL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR001494Importin-beta_N
IPR016024ARM-type_fold