prot_M-pyrifera_M_contig77942.18337.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77942.18337.1
Unique Nameprot_M-pyrifera_M_contig77942.18337.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length81
Homology
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BLAST of mRNA_M-pyrifera_M_contig77942.18337.1 vs. uniprot
Match: M5FWI2_DACPD (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5FWI2_DACPD)

HSP 1 Score: 50.8 bits (120), Expect = 1.970e-5
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0 
Query:    1 PLLPRTLSCAACARSKRKCDGGQPCDRCERLGKGLECVYPIDR 43
            PL   +++CA C + K +C GGQPC RCE+LG   EC  P  R
Sbjct:   22 PLARTSVACARCRQQKLRCSGGQPCQRCEKLGFARECHLPPPR 64
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77942.18337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
M5FWI2_DACPD1.970e-548.84Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 3..48
e-value: 1.0E-8
score: 45.0
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 8..45
e-value: 4.4E-10
score: 39.5
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 8..37
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 8..39
score: 10.051
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 7..81
e-value: 1.4E-11
score: 46.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 5..47
NoneNo IPR availablePANTHERPTHR31069FAMILY NOT NAMEDcoord: 6..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77942contigM-pyrifera_M_contig77942:2..244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77942.18337.1mRNA_M-pyrifera_M_contig77942.18337.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77942 2..244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77942.18337.1 ID=prot_M-pyrifera_M_contig77942.18337.1|Name=mRNA_M-pyrifera_M_contig77942.18337.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp
PLLPRTLSCAACARSKRKCDGGQPCDRCERLGKGLECVYPIDRRRLRLPE
RSEKVMKRLLHAESLLSGSFPSSDPSSSSQH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf