prot_M-pyrifera_M_contig7794.18334.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7794.18334.1
Unique Nameprot_M-pyrifera_M_contig7794.18334.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length218
Homology
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BLAST of mRNA_M-pyrifera_M_contig7794.18334.1 vs. uniprot
Match: A0A6H5KYX0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX0_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 3.470e-29
Identity = 85/202 (42.08%), Postives = 105/202 (51.98%), Query Frame = 0 
Query:   19 SLALKSPLRRSIAEFSEGVRAMGGEMYPSPYDSDDDSTSRAIDNLNASISGPVARASADAAAPAGAGDPQNMSFTINTRQMHGLEDSDSSMELTGNFTFNPQPMSARAVAGGTAAAATAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSELAYTLCGSSIRDAVSPGS--RRVSSGSLLDVMDEV 218
            SLA+KSP+R+SI  +SE VRAMGG   PSPYDSD D  +R ++NLNAS+ GP A A+   A+ A   +PQN SF+IN  Q+H L DSDSS+ELTG FT          +A      A                                              DSSEL  TL G+SIRDA SP    +R+SSGSLL V+D+V
Sbjct: 1198 SLAIKSPVRKSIMAYSEDVRAMGGGGPPSPYDSDFDPAARRVENLNASLLGPAASAAKRGASAASYEEPQNRSFSINNSQLHRLNDSDSSLELTGTFTTGEDIRVTPVMAAAVPRDAAVAGADGGAAVGTGGTGDLSRPTAGGAGDAERSGGDADVDDSMELNDSSELESTLHGASIRDAASPAPDPKRLSSGSLLSVVDDV 1399
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BLAST of mRNA_M-pyrifera_M_contig7794.18334.1 vs. uniprot
Match: D7FTI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI1_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 3.950e-22
Identity = 91/190 (47.89%), Postives = 111/190 (58.42%), Query Frame = 0 
Query:   33 FSEGVRAMGGEMYPSPYDSDDDSTSRAIDNLNASISGPVARASADAAAPAGAGDPQNMSFTINTRQMHGLEDSDSSMELTGNFTFNPQPMSARAVAGGTAAAATAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DSSELAYTLCGSSIRDAVSPGS--RRVSSGSLLDVMDEV 218
            +SE VRAMGG   PSPYDSD D  +R ++NLNAS+ GP A A    A+ A   +PQN SF+IN  Q+H L DSDSS+ELTG FT + +     A+A   +A     XXXXXXXXXXXXXXX                              +SSEL  TL G+SIRDA SP    +R+SSGSLL V+D+V
Sbjct:    3 YSEDVRAMGGGGPPSPYDSDFDPAARRVENLNASLLGPAASAVKRGASAASYEEPQNRSFSINNSQLHRLNDSDSSLELTGTFTTSEEVRITPAMAAAVSAPRDXXXXXXXXXXXXXXXXXGDLSRPAAGGAGEAEPSVGDADVDDSMDLNESSELESTLHGASIRDAASPAPDPKRLSSGSLLSVVDDV 192
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7794.18334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYX0_9PHAE3.470e-2942.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTI1_ECTSI3.950e-2247.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7794contigM-pyrifera_M_contig7794:1266..5604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7794.18334.1mRNA_M-pyrifera_M_contig7794.18334.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7794 1266..5604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7794.18334.1 ID=prot_M-pyrifera_M_contig7794.18334.1|Name=mRNA_M-pyrifera_M_contig7794.18334.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp
MSCGLVDRSSPSRNRRRDSLALKSPLRRSIAEFSEGVRAMGGEMYPSPYD
SDDDSTSRAIDNLNASISGPVARASADAAAPAGAGDPQNMSFTINTRQMH
GLEDSDSSMELTGNFTFNPQPMSARAVAGGTAAAATAFGGGSPTSLPMPA
AGSETRDEVDARGDGRGDGNDKDGDSRVDLNDSSELAYTLCGSSIRDAVS
PGSRRVSSGSLLDVMDEV
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