prot_M-pyrifera_M_contig77935.18333.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77935.18333.1
Unique Nameprot_M-pyrifera_M_contig77935.18333.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length145
Homology
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BLAST of mRNA_M-pyrifera_M_contig77935.18333.1 vs. uniprot
Match: A0A7S0PH13_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PH13_CAFRO)

HSP 1 Score: 92.4 bits (228), Expect = 3.880e-19
Identity = 56/113 (49.56%), Postives = 68/113 (60.18%), Query Frame = 0 
Query:   35 LSGIPSELYPDSF---------ASHLGPGDILLFETSSAGAAIQRAVTLSAFDHVAILVRPPPDAVKLVSCEPDEPWMLEVTGEGVGCYPIRNRLRLYGRTGLARRVVARRFL 138
            L  +P  L  DSF         + +LGPGDILLF T+S  AA+QR  T S FDH+ I+V  P  A   VS +P   W LEVTG+  GCYP+ NRL  Y  +GLA RVVARR +
Sbjct:  256 LPALPRALGGDSFRRRVGRLFLSEYLGPGDILLFRTTSTAAALQRFGTRSPFDHIGIVVPAPTCAAAAVSSQPCL-WYLEVTGDATGCYPLLNRLDAYDWSGLAPRVVARRVI 367
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BLAST of mRNA_M-pyrifera_M_contig77935.18333.1 vs. uniprot
Match: A0A7S2SLV3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SLV3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.660e-9
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 0 
Query:   53 PGDILLFETSSAGAAIQRAVTLSAFDHVAILVRPPPDAVKLVSCEPDEPW--MLEVTGEGVGCYPIRNRLRLYGRTGLARRVVARRF 137
            PGDILLF+ +   AA+QR +T S +DHVAI+V+            P  P+  +LE TG+GV CYP+  RLR YG+ G A  +  RR 
Sbjct:  310 PGDILLFKCTHTVAALQRKITKSTWDHVAIIVK-----------RPSMPYHELLEATGDGVECYPLIERLRAYGQ-GFASDIALRRL 384
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77935.18333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S0PH13_CAFRO3.880e-1949.56Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A7S2SLV3_9STRA1.660e-944.83Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1720.10coord: 36..139
e-value: 4.7E-7
score: 31.5
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 51..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77935contigM-pyrifera_M_contig77935:35..469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77935.18333.1mRNA_M-pyrifera_M_contig77935.18333.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77935 35..496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77935.18333.1 ID=prot_M-pyrifera_M_contig77935.18333.1|Name=mRNA_M-pyrifera_M_contig77935.18333.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
MQCLCARGAAASDPRVLSWLGAIRGLKPREPAAALSGIPSELYPDSFASH
LGPGDILLFETSSAGAAIQRAVTLSAFDHVAILVRPPPDAVKLVSCEPDE
PWMLEVTGEGVGCYPIRNRLRLYGRTGLARRVVARRFLKPLQPTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf