prot_M-pyrifera_M_contig779.18322.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig779.18322.1
Unique Nameprot_M-pyrifera_M_contig779.18322.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length97
Homology
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BLAST of mRNA_M-pyrifera_M_contig779.18322.1 vs. uniprot
Match: D7FQT5_ECTSI (SRP101, alpha subunit of the signal recognition particle receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT5_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 6.310e-30
Identity = 68/84 (80.95%), Postives = 73/84 (86.90%), Query Frame = 0 
Query:    1 SQVGGGKKEKREKKGTVWHDGSGGGKQLGQKAKEALDRSKREEDGAGDDALMAEMRSTYMPDKGEMPEWDEPDSDLDDNDDILD 84
            SQ GGGKKEK  KKGTVWHDGSG GKQLG+KAKEALDRSKREE  AGD+ LMAEMRSTYMP+ GE  EWDEP+SDLD+ DDILD
Sbjct:  182 SQAGGGKKEK--KKGTVWHDGSGSGKQLGEKAKEALDRSKREEGDAGDEVLMAEMRSTYMPEDGETAEWDEPESDLDE-DDILD 262
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BLAST of mRNA_M-pyrifera_M_contig779.18322.1 vs. uniprot
Match: A0A7S2C2X3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2X3_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.550e-6
Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 0 
Query:   13 KKGTVWHDGSGGGKQLGQKAKEALDRSKREEDGAGDDALMAEMRSTYMPDKGEMPEWDE 71
            KK T WHDG+   K+L +K KEAL+RS ++ DG  DDA +AE ++ ++P+ GE+ EW+E
Sbjct:  199 KKMTQWHDGTA--KKLTKKQKEALNRSAKDFDGNEDDAQLAEYQAKFLPEAGEVAEWEE 255
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig779.18322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQT5_ECTSI6.310e-3080.95SRP101, alpha subunit of the signal recognition pa... [more]
A0A7S2C2X3_9STRA1.550e-649.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig779contigM-pyrifera_M_contig779:28645..31384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig779.18322.1mRNA_M-pyrifera_M_contig779.18322.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig779 28643..31384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig779.18322.1 ID=prot_M-pyrifera_M_contig779.18322.1|Name=mRNA_M-pyrifera_M_contig779.18322.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
SQVGGGKKEKREKKGTVWHDGSGGGKQLGQKAKEALDRSKREEDGAGDDA
LMAEMRSTYMPDKGEMPEWDEPDSDLDDNDDILDLDDGDEAVEADNS
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