prot_M-pyrifera_M_contig779.18321.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig779.18321.1
Unique Nameprot_M-pyrifera_M_contig779.18321.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length54
Homology
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Match: D7FQT5_ECTSI (SRP101, alpha subunit of the signal recognition particle receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT5_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 9.720e-15
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0
Query:    1 MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVL 39
            MRALSKLINENEP+LVLFVGEALVGNDGVNQLQMFNQ L
Sbjct:  484 MRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQAL 522          
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Match: A0A5K1FVJ2_9MAGN (Uncharacterized protein (Fragment) n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1FVJ2_9MAGN)

HSP 1 Score: 65.5 bits (158), Expect = 6.330e-13
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVL 39
            MRALSKLIN N PDLVLFVGEALVGND V+QL  FNQVL
Sbjct:    6 MRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQVL 44          
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Match: A0A176WI44_MARPO (SRP54 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WI44_MARPO)

HSP 1 Score: 68.9 bits (167), Expect = 2.680e-12
Identity = 37/46 (80.43%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVLHTDFAVT 46
            MRALSKLIN NEPDLVLFVGEALVGNDGV+QL  FNQ L  D A T
Sbjct:  536 MRALSKLINVNEPDLVLFVGEALVGNDGVDQLMKFNQSL-ADMATT 580          
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Match: A0A314YM51_PRUYE (Uncharacterized protein n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314YM51_PRUYE)

HSP 1 Score: 63.2 bits (152), Expect = 6.500e-12
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVLHTDFAVTINE 49
            MRALSKL+N N PDLVLFVGEALVGND V+QL  FNQ++      T  E
Sbjct:    1 MRALSKLVNLNNPDLVLFVGEALVGNDVVDQLSKFNQIVIDSCCATFAE 49          
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Match: A0A444DVV9_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444DVV9_ENSVE)

HSP 1 Score: 65.1 bits (157), Expect = 8.010e-12
Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVLHTDFA 44
            MRALSKLIN N PDLVLFVGEALVGND V+QL  FNQV + DFA
Sbjct:  116 MRALSKLINLNNPDLVLFVGEALVGNDAVDQLTKFNQVRY-DFA 158          
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Match: A0A1Y1IH64_KLENI (Signal recognition particle receptor n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IH64_KLENI)

HSP 1 Score: 66.6 bits (161), Expect = 1.750e-11
Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    1 MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVL 39
            MR+LSKLIN+N+PDLVLFVGEALVGNDGV+QL  FNQ L
Sbjct:  529 MRSLSKLINQNQPDLVLFVGEALVGNDGVDQLMKFNQRL 567          
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Match: A0A2K1IZA8_PHYPA (SRP54 domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IZA8_PHYPA)

HSP 1 Score: 66.6 bits (161), Expect = 1.750e-11
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVL 39
            MRALSKLIN N+PDLVLFVGEALVGNDGV+QL  FNQ L
Sbjct:  545 MRALSKLINMNDPDLVLFVGEALVGNDGVHQLTQFNQKL 583          
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Match: W6KJA8_9TRYP (SRP54 domain-containing protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KJA8_9TRYP)

HSP 1 Score: 63.9 bits (154), Expect = 1.770e-11
Identity = 30/39 (76.92%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    1 MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVL 39
            MRAL+KLI++N+PDLVLFVGEALVGN+GV+QL+ FNQ L
Sbjct:   41 MRALAKLIHDNQPDLVLFVGEALVGNNGVDQLRKFNQCL 79          
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Match: UPI00053B925D (signal recognition particle receptor subunit alpha homolog n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B925D)

HSP 1 Score: 64.7 bits (156), Expect = 2.150e-11
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVLHTDFAVTINEGNP 52
            MRALSKLIN N+PDLVLFVGEALVGND V+QL  FNQ L +D + +   GNP
Sbjct:   91 MRALSKLINLNQPDLVLFVGEALVGNDAVDQLSKFNQKL-SDLSTS---GNP 138          
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Match: A0A422NUC6_9TRYP (Putative signal recognition particle receptor like protein n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A422NUC6_9TRYP)

HSP 1 Score: 66.2 bits (160), Expect = 2.380e-11
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVLHTDFA 44
            MRAL+KLI+EN+PDLVLFVGEALVGN GV+QL+ FNQ L  DFA
Sbjct:  471 MRALAKLIHENQPDLVLFVGEALVGNSGVDQLRRFNQCL-VDFA 513          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig779.18321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQT5_ECTSI9.720e-1594.87SRP101, alpha subunit of the signal recognition pa... [more]
A0A5K1FVJ2_9MAGN6.330e-1384.62Uncharacterized protein (Fragment) n=1 Tax=Nymphae... [more]
A0A176WI44_MARPO2.680e-1280.43SRP54 domain-containing protein n=2 Tax=Marchantia... [more]
A0A314YM51_PRUYE6.500e-1265.31Uncharacterized protein n=1 Tax=Prunus yedoensis v... [more]
A0A444DVV9_ENSVE8.010e-1279.55Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]
A0A1Y1IH64_KLENI1.750e-1182.05Signal recognition particle receptor n=1 Tax=Klebs... [more]
A0A2K1IZA8_PHYPA1.750e-1184.62SRP54 domain-containing protein n=2 Tax=Physcomitr... [more]
W6KJA8_9TRYP1.770e-1176.92SRP54 domain-containing protein n=1 Tax=Phytomonas... [more]
UPI00053B925D2.150e-1169.23signal recognition particle receptor subunit alpha... [more]
A0A422NUC6_9TRYP2.380e-1177.27Putative signal recognition particle receptor like... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..48
e-value: 4.7E-8
score: 34.6
NoneNo IPR availablePANTHERPTHR43134:SF1SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAcoord: 1..42
NoneNo IPR availablePANTHERPTHR43134FAMILY NOT NAMEDcoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig779contigM-pyrifera_M_contig779:21892..22053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig779.18321.1mRNA_M-pyrifera_M_contig779.18321.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig779 21892..22071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig779.18321.1 ID=prot_M-pyrifera_M_contig779.18321.1|Name=mRNA_M-pyrifera_M_contig779.18321.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp
MRALSKLINENEPDLVLFVGEALVGNDGVNQLQMFNQVLHTDFAVTINEG
NPA*
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