prot_M-pyrifera_M_contig77130.18181.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77130.18181.1
Unique Nameprot_M-pyrifera_M_contig77130.18181.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length51
Homology
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Match: A0A0B7B516_9EUPU (Aminoacyl-tRNA hydrolase n=2 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7B516_9EUPU)

HSP 1 Score: 57.8 bits (138), Expect = 5.710e-9
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 MSKGKVAAQCAHAAVAAVRAASHTHRTELKGWKRSGEPKVVCKVRTEEEM 50
            M KGKVAAQCAHAAV AV  +S+ + T LK W+R  +PKVV KV  EE +
Sbjct:   80 MGKGKVAAQCAHAAVGAVEKSSYENMTALKRWQRHAQPKVVLKVNDEESL 129          
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Match: A0A553NQW4_TIGCA (Aminoacyl-tRNA hydrolase n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NQW4_TIGCA)

HSP 1 Score: 54.7 bits (130), Expect = 1.330e-7
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 MSKGKVAAQCAHAAVAAVRAASHTHRTELKGWKRSGEPKVVCKVRTEEEM 50
            M KGK AAQCAHAAVAA + A H     L+ W+R G+PKVV KV T+ E+
Sbjct:  103 MGKGKAAAQCAHAAVAAYKMAKHRWPAILRRWERHGQPKVVLKVDTQLEL 152          
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Match: A0A6J1T997_FRAOC (Aminoacyl-tRNA hydrolase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1T997_FRAOC)

HSP 1 Score: 54.3 bits (129), Expect = 1.570e-7
Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MSKGKVAAQCAHAAVAAVRAA-SHTHRTELKGWKRSGEPKVVCKVRTEEEM 50
            M KGK+AAQC+HAAV A + A +HT +T L+ W+R+G+PK+V K  TEEE+
Sbjct:   88 MGKGKIAAQCSHAAVQAYQQAKAHTPKT-LQSWERNGQPKIVVKCETEEEL 137          
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Match: A0A0P5G5J0_9CRUS (Aminoacyl-tRNA hydrolase n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5G5J0_9CRUS)

HSP 1 Score: 53.9 bits (128), Expect = 1.800e-7
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 MSKGKVAAQCAHAAVAAVRAASHTHRTELKGWKRSGEPKVVCKVRTEEEM 50
            M KGK+AAQC+HAAVAA +   H     LK W+  G+PKVV KV +EEE+
Sbjct:   72 MGKGKIAAQCSHAAVAAYKQILHKDPEMLKWWENFGQPKVVVKVDSEEEL 121          
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Match: A0A166M3P2_9AGAM (Aminoacyl-tRNA hydrolase n=1 Tax=Peniophora sp. CONT TaxID=1314672 RepID=A0A166M3P2_9AGAM)

HSP 1 Score: 53.9 bits (128), Expect = 1.990e-7
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 MSKGKVAAQCAHAAVAAVRAASHTHRTELKGWKRSGEPKVVCKVRTEEEM 50
            M KGK+AAQC+HA +A  +A + ++   LK W+RSG+PKVV K  +EEEM
Sbjct:   80 MGKGKIAAQCSHATLACYKALASSNVRLLKHWERSGQPKVVLKCASEEEM 129          
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Match: A0A164QYB9_9CRUS (Aminoacyl-tRNA hydrolase n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A164QYB9_9CRUS)

HSP 1 Score: 52.4 bits (124), Expect = 5.380e-7
Identity = 28/50 (56.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    1 MSKGKVAAQCAHAAVAAVRAASHTHRTELKGWKRSGEPKVVCKVRTEEEM 50
            M KGK+A+QCAHAAV   + A       LK W  SG+PKVV KV TEEE+
Sbjct:   54 MGKGKIASQCAHAAVQCYKTALRMDNRTLKIWLASGQPKVVVKVDTEEEL 103          
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Match: E4X8D8_OIKDI (Aminoacyl-tRNA hydrolase n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4X8D8_OIKDI)

HSP 1 Score: 53.1 bits (126), Expect = 5.580e-7
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 MSKGKVAAQCAHAAVAAVRAASHTHRTELKGWKRSGEPKVVCKVRTEEEM 50
            M KGK+ AQC HAAV AVR AS     +L+ W++ G+PK+  KV TE+EM
Sbjct:   97 MGKGKMCAQCGHAAVGAVRTASVRVPNQLRRWEQYGQPKIALKVPTEDEM 146          
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Match: A0A6P8Z4N2_THRPL (Aminoacyl-tRNA hydrolase n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Z4N2_THRPL)

HSP 1 Score: 52.8 bits (125), Expect = 5.860e-7
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MSKGKVAAQCAHAAVAAVRAASHTHRTELKGWKRSGEPKVVCKVRTEEEM 50
            M KGK AAQCAHAAV+A   A       LK W+R+G+PK+V K  +EEE+
Sbjct:   86 MGKGKAAAQCAHAAVSAYEQARTRRPKTLKAWQRNGQPKIVVKCDSEEEL 135          
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Match: UPI0002658ACD (peptidyl-tRNA hydrolase 2, mitochondrial n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002658ACD)

HSP 1 Score: 52.4 bits (124), Expect = 6.740e-7
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MSKGKVAAQCAHAAVAAVRAASHTHRTELKGWKRSGEPKVVCKVRTEEEM 50
            M KGK+AAQC HAAV A + +       LK W+ SG+PK+VC+V + EEM
Sbjct:   70 MQKGKIAAQCCHAAVMAYKRSVEEESPFLKPWEMSGQPKIVCRVDSGEEM 119          
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Match: UPI00083BE1CA (peptidyl-tRNA hydrolase 2, mitochondrial-like isoform X1 n=1 Tax=Eufriesea mexicana TaxID=516756 RepID=UPI00083BE1CA)

HSP 1 Score: 51.2 bits (121), Expect = 8.550e-7
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 MSKGKVAAQCAHAAVAAVRAASHTHRTELKGWKRSGEPKVVCKVRTEEEM 50
            M KGKVAAQCAHAAVAA +AA       L GW+ +G+PK+  KV +E+ +
Sbjct:   40 MGKGKVAAQCAHAAVAAYKAAIKRCPIPLTGWEYNGQPKITLKVDSEDAL 89          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77130.18181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B7B516_9EUPU5.710e-960.00Aminoacyl-tRNA hydrolase n=2 Tax=Arion vulgaris Ta... [more]
A0A553NQW4_TIGCA1.330e-758.00Aminoacyl-tRNA hydrolase n=1 Tax=Tigriopus califor... [more]
A0A6J1T997_FRAOC1.570e-756.86Aminoacyl-tRNA hydrolase n=1 Tax=Frankliniella occ... [more]
A0A0P5G5J0_9CRUS1.800e-756.00Aminoacyl-tRNA hydrolase n=1 Tax=Daphnia magna Tax... [more]
A0A166M3P2_9AGAM1.990e-754.00Aminoacyl-tRNA hydrolase n=1 Tax=Peniophora sp. CO... [more]
A0A164QYB9_9CRUS5.380e-756.00Aminoacyl-tRNA hydrolase n=2 Tax=Daphnia magna Tax... [more]
E4X8D8_OIKDI5.580e-754.00Aminoacyl-tRNA hydrolase n=2 Tax=Oikopleura dioica... [more]
A0A6P8Z4N2_THRPL5.860e-754.00Aminoacyl-tRNA hydrolase n=1 Tax=Thrips palmi TaxI... [more]
UPI0002658ACD6.740e-752.00peptidyl-tRNA hydrolase 2, mitochondrial n=1 Tax=G... [more]
UPI00083BE1CA8.550e-754.00peptidyl-tRNA hydrolase 2, mitochondrial-like isof... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 1..50
e-value: 9.9E-14
score: 51.6
IPR002833Peptidyl-tRNA hydrolase, PTH2PANTHERPTHR12649PEPTIDYL-TRNA HYDROLASE 2coord: 1..50
IPR023476Peptidyl-tRNA hydrolase II domain superfamilyGENE3D3.40.1490.10coord: 1..50
e-value: 1.5E-14
score: 55.7
IPR023476Peptidyl-tRNA hydrolase II domain superfamilySUPERFAMILY102462Peptidyl-tRNA hydrolase IIcoord: 1..50
NoneNo IPR availablePANTHERPTHR12649:SF11PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIALcoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77130contigM-pyrifera_M_contig77130:71..223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77130.18181.1mRNA_M-pyrifera_M_contig77130.18181.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77130 41..223 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77130.18181.1 ID=prot_M-pyrifera_M_contig77130.18181.1|Name=mRNA_M-pyrifera_M_contig77130.18181.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=51bp
MSKGKVAAQCAHAAVAAVRAASHTHRTELKGWKRSGEPKVVCKVRTEEEM
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002833PTH2
IPR023476Pep_tRNA_hydro_II_dom_sf