prot_M-pyrifera_M_contig77113.18170.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77113.18170.1
Unique Nameprot_M-pyrifera_M_contig77113.18170.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length150
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77113.18170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006593Cytochrome b561/ferric reductase transmembraneSMARTSM00665561_7coord: 7..148
e-value: 5.1E-9
score: 46.0
IPR006593Cytochrome b561/ferric reductase transmembranePFAMPF03188Cytochrom_B561coord: 55..148
e-value: 3.2E-10
score: 40.3
IPR006593Cytochrome b561/ferric reductase transmembranePROSITEPS50939CYTOCHROME_B561coord: 1..150
score: 21.692
NoneNo IPR availableGENE3D1.20.120.1770coord: 2..150
e-value: 2.1E-11
score: 45.4
NoneNo IPR availablePANTHERPTHR15422FAMILY NOT NAMEDcoord: 7..149
NoneNo IPR availablePANTHERPTHR15422:SF24coord: 7..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 149..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..125
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 126..148
NoneNo IPR availableTMHMMTMhelixcoord: 95..114
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77113contigM-pyrifera_M_contig77113:521..970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77113.18170.1mRNA_M-pyrifera_M_contig77113.18170.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77113 521..970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77113.18170.1 ID=prot_M-pyrifera_M_contig77113.18170.1|Name=mRNA_M-pyrifera_M_contig77113.18170.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp
METALVMHSCMLALAFVVVTPISIVVSRYGRQWRWVRRFPVTSLSGEGPA
SRWFDLHLAFQLVAQVAIALGVVLPFCFLVDQDTFNHFPSLHSWLGLGLI
VAFCVAQPILGLPSDEATKKERQQQLWLHSILGRALVVTGFWCIYLGFDR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006593Cyt_b561/ferric_Rdtase_TM