prot_M-pyrifera_M_contig77009.18152.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77009.18152.1
Unique Nameprot_M-pyrifera_M_contig77009.18152.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length56
Homology
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BLAST of mRNA_M-pyrifera_M_contig77009.18152.1 vs. uniprot
Match: A0A6H5KR06_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR06_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 5.910e-22
Identity = 41/55 (74.55%), Postives = 49/55 (89.09%), Query Frame = 0 
Query:    1 PHLEQTLSTSPRTIGFVLVLPNVLYTMTAMKAEGVVDRHGVRKSLLWGLCVMAIR 55
            PHL QTLSTSPR+IGF LVLPNVLYT+TAMKAE +VDR G R++LL GLC+M++R
Sbjct:   55 PHLAQTLSTSPRSIGFALVLPNVLYTLTAMKAEDIVDRQGARRTLLAGLCIMSMR 109
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BLAST of mRNA_M-pyrifera_M_contig77009.18152.1 vs. uniprot
Match: D7G1X7_ECTSI (Major facilitator superfamily permease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X7_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.940e-19
Identity = 41/54 (75.93%), Postives = 49/54 (90.74%), Query Frame = 0 
Query:    1 PHLEQTLSTSPRTIGFVLVLPNVLYTMTAMKAEGVVDRHGVRKSLLWGLCVMAI 54
            PHL QTLSTSPR+IGFVLVLPNVLYT+TAMKAE +VDR G R++LL GLC+M++
Sbjct:  166 PHLAQTLSTSPRSIGFVLVLPNVLYTLTAMKAEDIVDRQGARRTLLAGLCIMSM 219
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77009.18152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KR06_9PHAE5.910e-2274.55MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G1X7_ECTSI1.940e-1975.93Major facilitator superfamily permease n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..54
e-value: 2.0E-5
score: 25.9
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 4..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77009contigM-pyrifera_M_contig77009:62..229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77009.18152.1mRNA_M-pyrifera_M_contig77009.18152.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77009 62..229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77009.18152.1 ID=prot_M-pyrifera_M_contig77009.18152.1|Name=mRNA_M-pyrifera_M_contig77009.18152.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
PHLEQTLSTSPRTIGFVLVLPNVLYTMTAMKAEGVVDRHGVRKSLLWGLC
VMAIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf