prot_M-pyrifera_M_contig7696.18138.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7696.18138.1
Unique Nameprot_M-pyrifera_M_contig7696.18138.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length288
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig7696.18138.1 vs. uniprot
Match: D7FVV8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV8_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 2.970e-81
Identity = 174/306 (56.86%), Postives = 211/306 (68.95%), Query Frame = 0 
Query:    1 MRRRIAIVVTETMKDRLAGSEEKGQGKGAAGSSVARGKQDASTAAYLKAFQAAVASKVESMCDVQDAREKLEAEDLMNDIERFGDDMRTARERLRATRARVTRLSASVCNDSLRAAEAEDDRACEVLEANAEHARREREAGMPLPTAGGEGSXXXXXXXXXXXG------------FSGIDGDVLEPKVSLLIGKLSELPGPLKAVLQEIPELTASLAKTVRSVEAAMGAGQSRTEALLGKSPPAPISAVRADGGGKPSAGG-------EGRPPEEARASAREARVEQARKEWEAAGVGTFGGIFS 287
            MR R++ VV ET K  LAG +       +AG +V    QDA+T AYL+AFQAAVA KV  +C+VQDARE  E ++L+ +I +F  D+R AR RL ATRARV RLSA  C D+LR +EA DDRAC VLEA+  HARRE E G PLP    + +XXXXXXXXXXX             F G++  V+EPKVS LIGK++ELPGPLK+VLQEIPELTASLA +V+  EAA+ AGQSRTEALLGK+PP P+S+ +  G               E  PPE+ARA+AREARV+QARKEWEA GVG  GGIF+
Sbjct:    1 MRYRVSTVVDETTKKSLAGKKS----GSSAGVAVVAPAQDAATTAYLRAFQAAVADKVRDLCEVQDARESREEDELVGEIFQFSHDLRAARSRLYATRARVARLSADTCRDALRVSEAADDRACAVLEASTAHARRESETGGPLPLRIDDAAXXXXXXXXXXXXXXXXXXXXXXGIFQGLETGVVEPKVSALIGKMAELPGPLKSVLQEIPELTASLAVSVQEAEAAIKAGQSRTEALLGKAPPTPLSSKKGKGAXXXXXXXXANVVEDERYPPEDARAAAREARVQQARKEWEAIGVGVVGGIFN 302
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7696.18138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVV8_ECTSI2.970e-8156.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7696contigM-pyrifera_M_contig7696:1233..2096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7696.18138.1mRNA_M-pyrifera_M_contig7696.18138.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7696 1233..2096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7696.18138.1 ID=prot_M-pyrifera_M_contig7696.18138.1|Name=mRNA_M-pyrifera_M_contig7696.18138.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=288bp
MRRRIAIVVTETMKDRLAGSEEKGQGKGAAGSSVARGKQDASTAAYLKAF
QAAVASKVESMCDVQDAREKLEAEDLMNDIERFGDDMRTARERLRATRAR
VTRLSASVCNDSLRAAEAEDDRACEVLEANAEHARREREAGMPLPTAGGE
GSAGGDGTGEGDGGFSGIDGDVLEPKVSLLIGKLSELPGPLKAVLQEIPE
LTASLAKTVRSVEAAMGAGQSRTEALLGKSPPAPISAVRADGGGKPSAGG
EGRPPEEARASAREARVEQARKEWEAAGVGTFGGIFS*
back to top