prot_M-pyrifera_M_contig75821.17886.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75821.17886.1
Unique Nameprot_M-pyrifera_M_contig75821.17886.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length76
Homology
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BLAST of mRNA_M-pyrifera_M_contig75821.17886.1 vs. uniprot
Match: A0A534Q683_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534Q683_9DELT)

HSP 1 Score: 48.9 bits (115), Expect = 1.020e-5
Identity = 27/71 (38.03%), Postives = 36/71 (50.70%), Query Frame = 0 
Query:    1 PQASGTVRGTLEVGGWILRPEDGTAPLQDAKSTLATYVVISDPGGGIPTFLVERVLAGQMRLGEALAKAIK 71
            P   G +R  +  G W + P DG       K TLATY +++DPGG IPTF+  +  A    L E  A+  K
Sbjct:   28 PPEDGVIRLKVNTGSWTMEPIDG------GKRTLATYQLLTDPGGSIPTFIANK--ANTKALPELFARVRK 90
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75821.17886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A534Q683_9DELT1.020e-538.03Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 1..75
e-value: 5.7E-10
score: 40.7
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 1..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75821contigM-pyrifera_M_contig75821:599..865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75821.17886.1mRNA_M-pyrifera_M_contig75821.17886.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75821 599..865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75821.17886.1 ID=prot_M-pyrifera_M_contig75821.17886.1|Name=mRNA_M-pyrifera_M_contig75821.17886.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
PQASGTVRGTLEVGGWILRPEDGTAPLQDAKSTLATYVVISDPGGGIPTF
LVERVLAGQMRLGEALAKAIKTHGPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf