prot_M-pyrifera_M_contig7545.17800.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7545.17800.1
Unique Nameprot_M-pyrifera_M_contig7545.17800.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length283
Homology
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BLAST of mRNA_M-pyrifera_M_contig7545.17800.1 vs. uniprot
Match: D7G440_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G440_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 7.970e-18
Identity = 114/343 (33.24%), Postives = 138/343 (40.23%), Query Frame = 0 
Query:   29 PPPDLRERAGSGTSFASSLRGAVGKGEKTGVERVTDGFFMRTLDRAVSSLSVGGGSSAHGSGWGGSVXXXXXXX----------GSVGSTGVGGXXXXXXXXXXXRRSSGVLLPWSQQDVGDDREDGLEGEVPSQVSEGKCEGDSDDLVEGLMRGVERALTAVGASAGAPDPPSAAAD--------------------------VGTPR--SLIDLSAHCPSESRRLSESRRLSTVS-------------------AADSLG-------GG-------------------------AGYDAAMANWPAGKVEGNPAWEEWSPEKKLLGHLMTASCLAVIILTW 282
            PPP + +     T+    L       EKTGV R+ +G  ++ +DRAV S+SVG GS           XXXXXXX          G++GS GVGG           RR SG++LPWSQQD+ D   DG       + +    +   D+          RA T  GA  G P       D                            TPR  S   LS   P   R +S S   S                      AAD+ G       GG                         AGY+A MANWPAGKVEGNPAWEEWS  KKL+ HL+TA CLAVI+LTW
Sbjct:  237 PPPPVSKPRDPRTTAEKGLEDTSSHSEKTGVGRMAEGL-LKQVDRAVPSISVGDGSGXXXXXXXXXXXXXXXXXXXXXXXVASVGALGS-GVGGGS---------RRPSGLVLPWSQQDM-DQGRDGGXXXXXDEATNLDADASGDNRFG-------RAFTGAGAGGGTPHLNDGGHDESMGPAERAFAAAFGXXXXXXXXXAVCSTPRVTSHPKLSFGTPVTERVVSTSTSASIYGTPSRVTPSASVFGTTLRGFAADTAGPSAGSTAGGSGHGSAGPVRKSSFAIEGVVAVDKVAGYEAGMANWPAGKVEGNPAWEEWSSAKKLVCHLVTAGCLAVIVLTW 560
[Close]
BLAST of mRNA_M-pyrifera_M_contig7545.17800.1 vs. uniprot
Match: D7FSU7_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSU7_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 3.800e-16
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 0 
Query:  236 AGYDAAMANWPAGKVEGNPAWEEWSPEKKLLGHLMTASCLAVIILTW 282
            AGY+AAMANWPAGKVEGNPAWEEWS  KKL+ HL+TA CLAVI+LTW
Sbjct:  957 AGYEAAMANWPAGKVEGNPAWEEWSSAKKLVCHLVTAGCLAVIVLTW 1003
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7545.17800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G440_ECTSI7.970e-1833.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSU7_ECTSI3.800e-1682.98FYVE-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..282
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7545contigM-pyrifera_M_contig7545:6565..7470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7545.17800.1mRNA_M-pyrifera_M_contig7545.17800.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7545 6565..12288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7545.17800.1 ID=prot_M-pyrifera_M_contig7545.17800.1|Name=mRNA_M-pyrifera_M_contig7545.17800.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=283bp
MSLALSGAFGSEHGSSASAKTVSGCEMMPPPDLRERAGSGTSFASSLRGA
VGKGEKTGVERVTDGFFMRTLDRAVSSLSVGGGSSAHGSGWGGSVSAGGS
GHGSVGSTGVGGGGGGGGGGGGSRRSSGVLLPWSQQDVGDDREDGLEGEV
PSQVSEGKCEGDSDDLVEGLMRGVERALTAVGASAGAPDPPSAAADVGTP
RSLIDLSAHCPSESRRLSESRRLSTVSAADSLGGGAGYDAAMANWPAGKV
EGNPAWEEWSPEKKLLGHLMTASCLAVIILTW*
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