prot_M-pyrifera_M_contig75269.17769.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig75269.17769.1
Unique Nameprot_M-pyrifera_M_contig75269.17769.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length113
Homology
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Match: D8LM18_ECTSI (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM18_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 4.370e-65
Identity = 105/113 (92.92%), Postives = 112/113 (99.12%), Query Frame = 0
Query:    1 ADYTEQLRLLCVTVYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGVQINRFQ 113
            ADYTEQL+ LCVTVYQHG+DRCRTRAMLCHITHHALHDRF+PARDLLLMSHLQDNISQADI+TQILYNRMMVTLGLCAFRKGL++DAHDCLRDVCSSRVKELLAQGVQ+NRFQ
Sbjct:  604 ADYTEQLKNLCVTVYQHGDDRCRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQ 716          
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Match: A0A835YUE3_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE3_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.980e-52
Identity = 89/112 (79.46%), Postives = 97/112 (86.61%), Query Frame = 0
Query:    2 DYTEQLRLLCVTVYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGVQINRFQ 113
            DY   +R LCV +Y+HG DR +TRAMLCHITHHALH RF+ ARDLLLMSHLQDNIS  D+ TQILYNRMMVTLGLCAFR GL+ DAHDCLRDVCSSRVKELLAQG+Q NRFQ
Sbjct:  613 DYAALMRDLCVFLYKHGGDRAKTRAMLCHITHHALHGRFHAARDLLLMSHLQDNISMVDVDTQILYNRMMVTLGLCAFRLGLIADAHDCLRDVCSSRVKELLAQGIQQNRFQ 724          
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Match: F0Y6I4_AURAN (PCI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I4_AURAN)

HSP 1 Score: 164 bits (415), Expect = 8.760e-45
Identity = 77/111 (69.37%), Postives = 89/111 (80.18%), Query Frame = 0
Query:    2 DYTEQLRLLCVTVYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGVQINRF 112
            D +  +R LC  VY HG+DRCRTRA+LCH+ HHALH RFY ARDLLLMSHLQD    +D+ TQILYNR MV LGLCAFR GL++DAH CL ++CSSRVKELLAQG+Q  RF
Sbjct:  483 DASASVRKLCEYVYAHGDDRCRTRALLCHVAHHALHGRFYVARDLLLMSHLQDTAYMSDVETQILYNRSMVMLGLCAFRNGLIHDAHACLAEICSSRVKELLAQGMQSARF 593          
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Match: A0A7S4E4E4_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4E4_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.570e-44
Identity = 78/111 (70.27%), Postives = 89/111 (80.18%), Query Frame = 0
Query:    2 DYTEQLRLLCVTVYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGVQINRF 112
            D  + L+ LC  VY HG+DRCRTRA+LCH+ HHALH RF+ ARDLLLMSHLQ+    ADI TQILYNR MV LGLCAFR GLV+DAH CL ++CSSRVKELLAQGVQ  R+
Sbjct:  568 DTAKSLKELCGYVYDHGDDRCRTRALLCHVAHHALHGRFHAARDLLLMSHLQEVAHDADIETQILYNRAMVLLGLCAFRSGLVHDAHSCLAEICSSRVKELLAQGVQSARW 678          
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Match: A0A7S2BS49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BS49_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.120e-42
Identity = 74/99 (74.75%), Postives = 83/99 (83.84%), Query Frame = 0
Query:   14 VYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGVQINRF 112
            VY+HG+DR RTRAMLCHI HHALHDRFY ARDLLLMSHLQ+NI   D+ TQIL+NR MV LGLCAFR GL+ +AH CL D+CSSR KELLAQGVQ  R+
Sbjct:  374 VYKHGDDRTRTRAMLCHIAHHALHDRFYDARDLLLMSHLQENIGHTDVTTQILFNRAMVMLGLCAFRLGLIFEAHQCLSDICSSRYKELLAQGVQSMRY 472          
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Match: A0A7S4IV42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IV42_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.500e-42
Identity = 73/112 (65.18%), Postives = 87/112 (77.68%), Query Frame = 0
Query:    2 DYTEQLRLLCVTVYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQA-DIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGVQINRF 112
            D  + +  LC  VY++G+DR +TR+MLCHI HHALHDRF  ARDLLLMSHLQD IS A D++T +L+NRMMVT+GL AFR G + DAH CL DVCS RV+ELLAQGV   RF
Sbjct:   33 DSAQLITDLCTYVYKYGSDRSKTRSMLCHIFHHALHDRFLEARDLLLMSHLQDTISNAGDVSTMLLFNRMMVTMGLAAFRLGRIWDAHQCLGDVCSGRVRELLAQGVSSGRF 144          
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Match: A0A7S3XQA8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQA8_HETAK)

HSP 1 Score: 151 bits (381), Expect = 4.790e-42
Identity = 69/99 (69.70%), Postives = 81/99 (81.82%), Query Frame = 0
Query:   14 VYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGVQINRF 112
            VY+HG DR RTRAMLCHITHHALHDRF+ ARDLLLMSHLQD I   D+ TQ+L+NRMM  LGL AFR G++ +AH CL ++CS R KELLAQGVQ ++F
Sbjct:   38 VYRHGGDRARTRAMLCHITHHALHDRFHQARDLLLMSHLQDTIGHTDVGTQVLFNRMMALLGLAAFRAGMIREAHACLTELCSGRTKELLAQGVQQSKF 136          
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Match: A0A7S2HV13_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV13_9STRA)

HSP 1 Score: 156 bits (395), Expect = 4.890e-42
Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0
Query:   14 VYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGVQINRF 112
            +Y+HG+DR RTRAMLCHI HHA HDRFY ARDLLLMSHLQ++I  AD+ TQIL+NR MV LGLCAFR GL+ DAH CL D+CSSRVKELLAQG+Q  R+
Sbjct:  583 IYKHGDDRTRTRAMLCHIAHHAAHDRFYEARDLLLMSHLQEHIGHADVHTQILFNRAMVMLGLCAFRAGLIWDAHQCLSDICSSRVKELLAQGLQSMRY 681          
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Match: A0A6U3ZAQ9_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZAQ9_9STRA)

HSP 1 Score: 155 bits (393), Expect = 9.160e-42
Identity = 78/104 (75.00%), Postives = 84/104 (80.77%), Query Frame = 0
Query:   10 LCVTVYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQA-DIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGVQINRF 112
            LC  VYQHG+DR RTRAMLCHI HHALHDRF  ARDLLLMSHLQD IS A D++T IL+NRMMVTLGL AFR G + DAH CL DVCS RV+ELLAQGV   RF
Sbjct:  653 LCTYVYQHGSDRSRTRAMLCHIYHHALHDRFLDARDLLLMSHLQDTISSAGDVSTMILFNRMMVTLGLAAFRLGRIWDAHQCLSDVCSGRVRELLAQGVSTGRF 756          
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Match: A0A7S2SSJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSJ9_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.840e-41
Identity = 71/99 (71.72%), Postives = 82/99 (82.83%), Query Frame = 0
Query:   14 VYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGVQINRF 112
            +++HG+ R RTRAMLC + HHALHDRFY ARDLLLMSH+QDNI   D+ TQIL+NR MV LGLCAFR GL+ DAH CL DVCSSRV+ELLAQG+Q  RF
Sbjct:  111 IFKHGDVRTRTRAMLCQVAHHALHDRFYEARDLLLMSHIQDNIMNTDVHTQILFNRTMVMLGLCAFRAGLIWDAHQCLTDVCSSRVRELLAQGMQSARF 209          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75269.17769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM18_ECTSI4.370e-6592.92Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YUE3_9STRA1.980e-5279.46Eukaryotic translation initiation factor 3 subunit... [more]
F0Y6I4_AURAN8.760e-4569.37PCI domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A7S4E4E4_9STRA4.570e-4470.27Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2BS49_9STRA1.120e-4274.75Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S4IV42_9STRA1.500e-4265.18Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S3XQA8_HETAK4.790e-4269.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2HV13_9STRA4.890e-4273.74Eukaryotic translation initiation factor 3 subunit... [more]
A0A6U3ZAQ9_9STRA9.160e-4275.00Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2SSJ9_9STRA1.840e-4171.72Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008905Eukaryotic translation initiation factor 3 subunit C, N-terminal domainPFAMPF05470eIF-3c_Ncoord: 8..112
e-value: 4.2E-51
score: 174.0
NoneNo IPR availablePANTHERPTHR13937:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C-RELATEDcoord: 3..112
IPR027516Eukaryotic translation initiation factor 3 subunit CPANTHERPTHR13937EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATEDcoord: 3..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75269contigM-pyrifera_M_contig75269:269..607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75269.17769.1mRNA_M-pyrifera_M_contig75269.17769.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig75269 269..607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig75269.17769.1 ID=prot_M-pyrifera_M_contig75269.17769.1|Name=mRNA_M-pyrifera_M_contig75269.17769.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp
ADYTEQLRLLCVTVYQHGNDRCRTRAMLCHITHHALHDRFYPARDLLLMS
HLQDNISQADIATQILYNRMMVTLGLCAFRKGLVNDAHDCLRDVCSSRVK
ELLAQGVQINRFQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008905EIF3C_N_dom
IPR027516EIF3C