prot_M-pyrifera_M_contig74538.17642.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig74538.17642.1
Unique Nameprot_M-pyrifera_M_contig74538.17642.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length70
Homology
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Match: A0A7S1GD93_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GD93_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 8.590e-19
Identity = 40/55 (72.73%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    2 LAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYATEDDFV 56
            + E R+ +DGLEKERDFYF KLRDIEIL Q Y G DK   D IFKILYATEDDFV
Sbjct:   36 VTELRLSVDGLEKERDFYFGKLRDIEILLQAYAGPDKALADSIFKILYATEDDFV 90          
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Match: A0A812Q064_9DINO (EB1C protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q064_9DINO)

HSP 1 Score: 80.5 bits (197), Expect = 4.230e-16
Identity = 36/60 (60.00%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    1 KLAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYATEDDFVVPDE 60
            +++E ++ ++GLE+ERDFYF KLRD+EIL QT+ G +K  VD++FKILYATE+DFV  DE
Sbjct:  224 QVSELKLAVEGLERERDFYFGKLRDVEILLQTFTGGEKDLVDKMFKILYATEEDFVTVDE 283          
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Match: A0A3P8YYF4_ESOLU (Microtubule-associated protein RP/EB family member 3-like n=1 Tax=Esox lucius TaxID=8010 RepID=A0A3P8YYF4_ESOLU)

HSP 1 Score: 75.5 bits (184), Expect = 6.060e-15
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 KLAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYATEDDFVVPDE 60
            +L E ++ +DGLEKERDFYFSKLRDIE++ Q ++ D  P + +I  ILYATED F  PD+
Sbjct:  165 QLMELKLTVDGLEKERDFYFSKLRDIELICQEHESDSNPHLSRIMDILYATEDGFAAPDD 224          
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Match: A0A8C7D0B5_ONCKI (Microtubule-associated protein RP/EB family member 3-like n=1 Tax=Oncorhynchus kisutch TaxID=8019 RepID=A0A8C7D0B5_ONCKI)

HSP 1 Score: 75.1 bits (183), Expect = 1.120e-14
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 KLAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYATEDDFVVPDE 60
            +L E ++ +DGLEKERDFYFSKLRDIE++ Q ++ D  P + +I  ILYATED F  PD+
Sbjct:  185 QLMELKLTVDGLEKERDFYFSKLRDIELICQEHESDTNPHLSRIMDILYATEDGFAAPDD 244          
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Match: A0A8C7KR94_ONCKI (Microtubule-associated protein RP/EB family member 3 n=2 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7KR94_ONCKI)

HSP 1 Score: 75.1 bits (183), Expect = 1.180e-14
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 KLAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYATEDDFVVPDE 60
            +L E ++ +DGLEKERDFYFSKLRDIE++ Q ++ D  P + +I  ILYATED F  PD+
Sbjct:  189 QLMELKLTVDGLEKERDFYFSKLRDIELICQEHESDTNPHLSRIMDILYATEDGFAAPDD 248          
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Match: A0A1S3SRD5_SALSA (microtubule-associated protein RP/EB family member 3-like n=4 Tax=Salmoninae TaxID=504568 RepID=A0A1S3SRD5_SALSA)

HSP 1 Score: 75.1 bits (183), Expect = 1.180e-14
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 KLAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYATEDDFVVPDE 60
            +L E ++ +DGLEKERDFYFSKLRDIE++ Q ++ D  P + +I  ILYATED F  PD+
Sbjct:  189 QLMELKLTVDGLEKERDFYFSKLRDIELICQEHESDTNPHLSRIMDILYATEDGFAAPDD 248          
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Match: A0A8J5XG02_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XG02_DIALT)

HSP 1 Score: 75.1 bits (183), Expect = 1.210e-14
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 KLAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYATEDDFVVP 58
            ++ + ++ +DGLEKERDFYF KLRDIEIL QT++    PF+  +  ILY TEDDFV P
Sbjct:  197 EITDLKLTVDGLEKERDFYFGKLRDIEILCQTHEDQSLPFLQNVLSILYQTEDDFVTP 254          
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Match: A0A4W5LPE1_9TELE (Microtubule-associated protein, RP/EB family, member 3a n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5LPE1_9TELE)

HSP 1 Score: 75.1 bits (183), Expect = 1.240e-14
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 KLAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYATEDDFVVPDE 60
            +L E ++ +DGLEKERDFYFSKLRDIE++ Q ++ D  P + +I  ILYATED F  PD+
Sbjct:  193 QLMELKLTVDGLEKERDFYFSKLRDIELICQEHESDTNPHLSRIMDILYATEDGFAAPDD 252          
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Match: A0A060W2X5_ONCMY (Microtubule-associated protein, RP/EB family, member 3a n=26 Tax=Protacanthopterygii TaxID=41705 RepID=A0A060W2X5_ONCMY)

HSP 1 Score: 75.1 bits (183), Expect = 1.410e-14
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 KLAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYATEDDFVVPDE 60
            +L E ++ +DGLEKERDFYFSKLRDIE++ Q ++ D  P + +I  ILYATED F  PD+
Sbjct:  204 QLMELKLTVDGLEKERDFYFSKLRDIELICQEHESDTNPHLSRIMDILYATEDGFAAPDD 263          
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Match: A0A668AH74_9TELE (Microtubule-associated protein RP/EB family member 3-like n=26 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A668AH74_9TELE)

HSP 1 Score: 74.7 bits (182), Expect = 1.640e-14
Identity = 33/60 (55.00%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 KLAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYATEDDFVVPDE 60
            +L E ++ +DGLEKERDFYFSKLRDIE++ Q ++ ++ P + +I  ILYATED F  PD+
Sbjct:  189 QLMELKLTVDGLEKERDFYFSKLRDIELICQEHESENNPILSRIIDILYATEDGFAAPDD 248          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74538.17642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1GD93_9STRA8.590e-1972.73Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A812Q064_9DINO4.230e-1660.00EB1C protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A3P8YYF4_ESOLU6.060e-1556.67Microtubule-associated protein RP/EB family member... [more]
A0A8C7D0B5_ONCKI1.120e-1456.67Microtubule-associated protein RP/EB family member... [more]
A0A8C7KR94_ONCKI1.180e-1456.67Microtubule-associated protein RP/EB family member... [more]
A0A1S3SRD5_SALSA1.180e-1456.67microtubule-associated protein RP/EB family member... [more]
A0A8J5XG02_DIALT1.210e-1456.90Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A4W5LPE1_9TELE1.240e-1456.67Microtubule-associated protein, RP/EB family, memb... [more]
A0A060W2X5_ONCMY1.410e-1456.67Microtubule-associated protein, RP/EB family, memb... [more]
A0A668AH74_9TELE1.640e-1455.00Microtubule-associated protein RP/EB family member... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042180Intermediate filament, rod domain, coil 1BGENE3D1.20.5.1160coord: 4..32
e-value: 1.5E-6
score: 29.9
IPR004953EB1, C-terminalPFAMPF03271EB1coord: 12..50
e-value: 2.9E-19
score: 69.0
IPR004953EB1, C-terminalPROSITEPS51230EB1_Ccoord: 1..57
score: 15.944
IPR027738EB3PANTHERPTHR10623:SF10MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 3coord: 2..66
IPR027328Microtubule-associated protein RP/EBPANTHERPTHR10623MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBERcoord: 2..66
IPR036133EB1, C-terminal domain superfamilySUPERFAMILY140612EB1 dimerisation domain-likecoord: 2..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74538contigM-pyrifera_M_contig74538:796..1005 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74538.17642.1mRNA_M-pyrifera_M_contig74538.17642.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig74538 796..1005 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig74538.17642.1 ID=prot_M-pyrifera_M_contig74538.17642.1|Name=mRNA_M-pyrifera_M_contig74538.17642.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=70bp
KLAESRVVIDGLEKERDFYFSKLRDIEILAQTYKGDDKPFVDQIFKILYA
TEDDFVVPDETADAAQDETD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042180IF_rod_dom_coil1B
IPR004953EB1_C
IPR027738EB3
IPR027328MAPRE
IPR036133EB1_C_sf