prot_M-pyrifera_M_contig73887.17500.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73887.17500.1
Unique Nameprot_M-pyrifera_M_contig73887.17500.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length337
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig73887.17500.1 vs. uniprot
Match: UPI001CC76EFC (tetratricopeptide repeat protein n=1 Tax=Ferruginibacter sp. KIS38-8 TaxID=2875540 RepID=UPI001CC76EFC)

HSP 1 Score: 115 bits (287), Expect = 2.290e-25
Identity = 97/335 (28.96%), Postives = 156/335 (46.57%), Query Frame = 0 
Query:    2 PSSADIQLELAMCLHRAGEFKAAAASYEAYIESPTAKSRGPGVFDALLADCLIRAGKYERACDAWERVPFRSYRIKISKYAHKIHGDASPFQRHYDLLTRARQKDLDAGAQMILLDCEWDWDWWTVEVKRDFLEADSSELGKLFSAADKRLILIQA-ISAFHLPEEPNVAFFTETLKKNNLIIGDTPELPSHGLLVSHAVRLLLENELSTPENLLGIHEGRFEAELLQPADEI-DVEMVNVYASLLAQ-SGKLEALARTDRLMWQKCKEPRFAASYLMSLIRDEKDLSDKEVQRIAREFPDHRVVSSIALSLAVEENQSLSEPLAVAIAAEFQSL 333
            P   +  LE A+ LHR GEF+ AA  YE Y +      R     +  LADC I  G  E++ + W +    ++   I    H I+G     +   D      Q +++A   +ILLD  W+ DWW   ++  FL  D        +  D    +IQA +   +L +  N +   +++   N +I D+  LP++G L S  +R+   N++ + EN      G    +LL  A +  D E +N+YA L A  + K+++    D+L W   K+ RFA SY M    D+    DKE+ +   +FP+   +  +  + A  EN+ L   L   I  EF++L
Sbjct:   57 PEDLNFNLEYAIELHRNGEFEEAAKLYEKYEKEKPEDFR----VNVWLADCYINIGDVEKSIENWNKSDHPNHHTSIDFAIHTIYGRTDQIKLRNDYRKEIEQGNIEAFYPLILLDMNWELDWWNSVIQEYFLAEDLLLAKNKLNQNDNDYKIIQAYVKIKNLSKSGNNSDSIKSILIQNKLIMDSNPLPTNGQLTSDLLRICFINKILS-ENDFYKQRGN---DLLNLAKKTKDKETLNIYAYLQATVNDKVDSFI--DKLGWTDFKDERFAISYFMGKA-DKNRYDDKELSQALADFPNSSKLYWVKANCAKIENKPLRPILIELIKREFKTL 380
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73887.17500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001CC76EFC2.290e-2528.96tetratricopeptide repeat protein n=1 Tax=Ferrugini... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..86
e-value: 2.6E-6
score: 29.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73887contigM-pyrifera_M_contig73887:16..1026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73887.17500.1mRNA_M-pyrifera_M_contig73887.17500.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73887 16..1026 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73887.17500.1 ID=prot_M-pyrifera_M_contig73887.17500.1|Name=mRNA_M-pyrifera_M_contig73887.17500.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=337bp
DPSSADIQLELAMCLHRAGEFKAAAASYEAYIESPTAKSRGPGVFDALLA
DCLIRAGKYERACDAWERVPFRSYRIKISKYAHKIHGDASPFQRHYDLLT
RARQKDLDAGAQMILLDCEWDWDWWTVEVKRDFLEADSSELGKLFSAADK
RLILIQAISAFHLPEEPNVAFFTETLKKNNLIIGDTPELPSHGLLVSHAV
RLLLENELSTPENLLGIHEGRFEAELLQPADEIDVEMVNVYASLLAQSGK
LEALARTDRLMWQKCKEPRFAASYLMSLIRDEKDLSDKEVQRIAREFPDH
RVVSSIALSLAVEENQSLSEPLAVAIAAEFQSLTPNP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf