prot_M-pyrifera_M_contig72807.17293.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72807.17293.1
Unique Nameprot_M-pyrifera_M_contig72807.17293.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length82
Homology
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A5A8CXX3_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CXX3_CAFRO)

HSP 1 Score: 85.5 bits (210), Expect = 2.320e-18
Identity = 41/82 (50.00%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 82
            R+ +LIR+FR H +DTGS RVQVA+LTE++ AL  H   +  DK +KR L M V +RR+ L +LM+SD++ YR +IR++G +
Sbjct:  145 RKSELIRKFRTHTYDTGSARVQVAILTERVEALQRHLSGNNHDKSSKRMLQMLVHRRRKMLSFLMESDFAGYRILIREMGLR 226          
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: UPI00200EF926 (30S ribosomal protein S15 n=1 Tax=Conexibacter sp. S30A1 TaxID=2937800 RepID=UPI00200EF926)

HSP 1 Score: 79.7 bits (195), Expect = 8.430e-18
Identity = 43/79 (54.43%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    4 QLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 82
            QLI RF     DTG   VQVALLTE+I  L EH + HKKD  ++R L M V +RRRFLRYL +SD   YRA++++LG +
Sbjct:   10 QLIERFGAGPQDTGKTEVQVALLTERINQLTEHLRTHKKDHHSRRGLLMLVGQRRRFLRYLERSDLERYRALVKELGLR 88          
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A7V9T4M3_9ACTN (30S ribosomal protein S15 n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V9T4M3_9ACTN)

HSP 1 Score: 79.0 bits (193), Expect = 1.700e-17
Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 82
            R+ ++I RF     DTGS RVQVALLTE+I  L EH +AH KD  ++R L M V +RRR LRYL ++D  +YRA+I +LG +
Sbjct:    7 RKAEIITRFGSDDRDTGSTRVQVALLTERINGLTEHLRAHGKDHHSRRGLLMLVGQRRRLLRYLQRNDVEAYRALIAELGLR 88          
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A1I4KAU4_9BACI (30S ribosomal protein S15 n=4 Tax=Salibacterium TaxID=1884429 RepID=A0A1I4KAU4_9BACI)

HSP 1 Score: 77.8 bits (190), Expect = 4.850e-17
Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 82
            R+ +L++ F+ H  DTGS  VQ+A+LTEQIT LN+H + HKKD  ++R L   V KRR  L +L K D + YR++I+ LG +
Sbjct:    7 RKQELVQEFKTHENDTGSPEVQIAILTEQITTLNQHLRDHKKDHHSRRGLLKMVGKRRNLLTFLRKKDVTRYRSLIKQLGLR 88          
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A812Q0U9_9DINO (RpsO protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q0U9_9DINO)

HSP 1 Score: 81.3 bits (199), Expect = 5.330e-17
Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 82
            ++HQLI +F+ H FDTGS RVQVALLT +I A+  H  A  +D   KR L   V++RR+ ++Y++K DY++YR +I++L  K
Sbjct:  109 KKHQLINKFKTHTFDTGSSRVQVALLTARIQAMTAHLAASPRDSKGKRTLQSLVARRRQLMQYMLKHDYANYRVIIKELNLK 190          
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A366EHE1_9BACI (30S ribosomal protein S15 n=2 Tax=Paraliobacillus TaxID=200903 RepID=A0A366EHE1_9BACI)

HSP 1 Score: 77.4 bits (189), Expect = 6.890e-17
Identity = 41/82 (50.00%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 82
            R++++I  F+ H  DTGS  VQ+A+LTE+IT LNEH + HKKD  ++R L   V KRR  L YL   D + YR VIR LG +
Sbjct:    7 RKNEIINEFKTHDNDTGSPEVQIAVLTEEITKLNEHLREHKKDHHSRRGLLKMVGKRRNLLTYLRNKDITRYREVIRKLGLR 88          
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A5B8UCU8_9ACTN (30S ribosomal protein S15 n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A5B8UCU8_9ACTN)

HSP 1 Score: 77.0 bits (188), Expect = 9.270e-17
Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 82
            R+ +++ +F ++  DTGS RVQVALLT +I  L EH ++HKKD  ++R L M V +RRR L YL K D   YRA+I +LG +
Sbjct:    5 RKQEIVDKFGDNAEDTGSTRVQVALLTARINDLTEHLRSHKKDHHSRRGLLMLVGQRRRLLNYLAKKDLEGYRALIAELGLR 86          
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A0A5GPF7_9BACI (30S ribosomal protein S15 n=1 Tax=Pontibacillus halophilus JSM 076056 = DSM 19796 TaxID=1385510 RepID=A0A0A5GPF7_9BACI)

HSP 1 Score: 77.0 bits (188), Expect = 9.770e-17
Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 82
            R++++I  F++H  DTGS  VQ+A+LTEQIT LNEH + HK+D  ++R L   V KRR  L YL  +D + YR VI+ LG +
Sbjct:    7 RKNEIISEFKQHDNDTGSPEVQIAVLTEQITKLNEHLRTHKQDHHSRRGLLKMVGKRRNLLNYLRNNDITRYRDVIQKLGLR 88          
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A7K0QMM7_9ACTN (30S ribosomal protein S15 n=2 Tax=root TaxID=1 RepID=A0A7K0QMM7_9ACTN)

HSP 1 Score: 77.0 bits (188), Expect = 1.000e-16
Identity = 38/79 (48.10%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    4 QLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 82
            +++ +F E+  DTGS RVQ+ALLT++I  L EH ++HKKD  ++R L M V +RRR L YL K D   YRA++ +LG +
Sbjct:   11 EIVEKFGENAQDTGSTRVQIALLTQRINDLTEHLRSHKKDHASRRGLLMLVGQRRRLLNYLQKRDLEGYRALVAELGLR 89          
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A1I3Y7N0_HALDA (30S ribosomal protein S15 n=24 Tax=Bacillaceae TaxID=186817 RepID=A0A1I3Y7N0_HALDA)

HSP 1 Score: 76.6 bits (187), Expect = 1.390e-16
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 82
            R+ +LI  ++ H  DTGS  VQ+A+LTEQIT LNEH +AHK+D  ++R L   V KRR  L YL   D + YR +I+ LG +
Sbjct:    7 RKQELISEYKTHDNDTGSPEVQIAVLTEQITTLNEHLRAHKQDHHSRRGLLKMVGKRRNLLNYLRNKDITRYRELIKSLGLR 88          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CXX3_CAFRO2.320e-1850.00Uncharacterized protein n=3 Tax=Sar TaxID=2698737 ... [more]
UPI00200EF9268.430e-1854.4330S ribosomal protein S15 n=1 Tax=Conexibacter sp.... [more]
A0A7V9T4M3_9ACTN1.700e-1752.4430S ribosomal protein S15 n=1 Tax=Solirubrobactera... [more]
A0A1I4KAU4_9BACI4.850e-1747.5630S ribosomal protein S15 n=4 Tax=Salibacterium Ta... [more]
A0A812Q0U9_9DINO5.330e-1747.56RpsO protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A366EHE1_9BACI6.890e-1750.0030S ribosomal protein S15 n=2 Tax=Paraliobacillus ... [more]
A0A5B8UCU8_9ACTN9.270e-1748.7830S ribosomal protein S15 n=3 Tax=Actinobacteria T... [more]
A0A0A5GPF7_9BACI9.770e-1748.7830S ribosomal protein S15 n=1 Tax=Pontibacillus ha... [more]
A0A7K0QMM7_9ACTN1.000e-1648.1030S ribosomal protein S15 n=2 Tax=root TaxID=1 Rep... [more]
A0A1I3Y7N0_HALDA1.390e-1648.7830S ribosomal protein S15 n=24 Tax=Bacillaceae Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 2..82
e-value: 3.1E-28
score: 109.8
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 3..81
e-value: 8.5E-28
score: 96.4
NoneNo IPR availableGENE3D1.10.287.10coord: 1..82
e-value: 1.7E-26
score: 94.3
NoneNo IPR availablePRODOMPD157043coord: 4..82
e-value: 1.0E-15
score: 197.0
IPR005290Ribosomal protein S15, bacterial-typeTIGRFAMTIGR00952TIGR00952coord: 2..82
e-value: 1.3E-27
score: 93.9
IPR005290Ribosomal protein S15, bacterial-typePANTHERPTHR23321RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLARcoord: 2..82
IPR005290Ribosomal protein S15, bacterial-typeHAMAPMF_01343_BRibosomal_S15_Bcoord: 1..82
score: 16.002
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 2..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72807contigM-pyrifera_M_contig72807:301..671 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72807.17293.1mRNA_M-pyrifera_M_contig72807.17293.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72807 301..671 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72807.17293.1 ID=prot_M-pyrifera_M_contig72807.17293.1|Name=mRNA_M-pyrifera_M_contig72807.17293.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRL
AMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR005290Ribosomal_S15_bac-type
IPR009068S15_NS1_RNA-bd