mRNA_M-pyrifera_M_contig72807.17293.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A5A8CXX3_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CXX3_CAFRO) HSP 1 Score: 85.5 bits (210), Expect = 2.320e-18 Identity = 41/82 (50.00%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 246 R+ +LIR+FR H +DTGS RVQVA+LTE++ AL H + DK +KR L M V +RR+ L +LM+SD++ YR +IR++G + Sbjct: 145 RKSELIRKFRTHTYDTGSARVQVAILTERVEALQRHLSGNNHDKSSKRMLQMLVHRRRKMLSFLMESDFAGYRILIREMGLR 226
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: UPI00200EF926 (30S ribosomal protein S15 n=1 Tax=Conexibacter sp. S30A1 TaxID=2937800 RepID=UPI00200EF926) HSP 1 Score: 79.7 bits (195), Expect = 8.430e-18 Identity = 43/79 (54.43%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 10 QLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 246 QLI RF DTG VQVALLTE+I L EH + HKKD ++R L M V +RRRFLRYL +SD YRA++++LG + Sbjct: 10 QLIERFGAGPQDTGKTEVQVALLTERINQLTEHLRTHKKDHHSRRGLLMLVGQRRRFLRYLERSDLERYRALVKELGLR 88
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A7V9T4M3_9ACTN (30S ribosomal protein S15 n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V9T4M3_9ACTN) HSP 1 Score: 79.0 bits (193), Expect = 1.700e-17 Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 1 Query: 1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 246 R+ ++I RF DTGS RVQVALLTE+I L EH +AH KD ++R L M V +RRR LRYL ++D +YRA+I +LG + Sbjct: 7 RKAEIITRFGSDDRDTGSTRVQVALLTERINGLTEHLRAHGKDHHSRRGLLMLVGQRRRLLRYLQRNDVEAYRALIAELGLR 88
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A1I4KAU4_9BACI (30S ribosomal protein S15 n=4 Tax=Salibacterium TaxID=1884429 RepID=A0A1I4KAU4_9BACI) HSP 1 Score: 77.8 bits (190), Expect = 4.850e-17 Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 246 R+ +L++ F+ H DTGS VQ+A+LTEQIT LN+H + HKKD ++R L V KRR L +L K D + YR++I+ LG + Sbjct: 7 RKQELVQEFKTHENDTGSPEVQIAILTEQITTLNQHLRDHKKDHHSRRGLLKMVGKRRNLLTFLRKKDVTRYRSLIKQLGLR 88
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A812Q0U9_9DINO (RpsO protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q0U9_9DINO) HSP 1 Score: 81.3 bits (199), Expect = 5.330e-17 Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 246 ++HQLI +F+ H FDTGS RVQVALLT +I A+ H A +D KR L V++RR+ ++Y++K DY++YR +I++L K Sbjct: 109 KKHQLINKFKTHTFDTGSSRVQVALLTARIQAMTAHLAASPRDSKGKRTLQSLVARRRQLMQYMLKHDYANYRVIIKELNLK 190
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A366EHE1_9BACI (30S ribosomal protein S15 n=2 Tax=Paraliobacillus TaxID=200903 RepID=A0A366EHE1_9BACI) HSP 1 Score: 77.4 bits (189), Expect = 6.890e-17 Identity = 41/82 (50.00%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 246 R++++I F+ H DTGS VQ+A+LTE+IT LNEH + HKKD ++R L V KRR L YL D + YR VIR LG + Sbjct: 7 RKNEIINEFKTHDNDTGSPEVQIAVLTEEITKLNEHLREHKKDHHSRRGLLKMVGKRRNLLTYLRNKDITRYREVIRKLGLR 88
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A5B8UCU8_9ACTN (30S ribosomal protein S15 n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A5B8UCU8_9ACTN) HSP 1 Score: 77.0 bits (188), Expect = 9.270e-17 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 246 R+ +++ +F ++ DTGS RVQVALLT +I L EH ++HKKD ++R L M V +RRR L YL K D YRA+I +LG + Sbjct: 5 RKQEIVDKFGDNAEDTGSTRVQVALLTARINDLTEHLRSHKKDHHSRRGLLMLVGQRRRLLNYLAKKDLEGYRALIAELGLR 86
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A0A5GPF7_9BACI (30S ribosomal protein S15 n=1 Tax=Pontibacillus halophilus JSM 076056 = DSM 19796 TaxID=1385510 RepID=A0A0A5GPF7_9BACI) HSP 1 Score: 77.0 bits (188), Expect = 9.770e-17 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 246 R++++I F++H DTGS VQ+A+LTEQIT LNEH + HK+D ++R L V KRR L YL +D + YR VI+ LG + Sbjct: 7 RKNEIISEFKQHDNDTGSPEVQIAVLTEQITKLNEHLRTHKQDHHSRRGLLKMVGKRRNLLNYLRNNDITRYRDVIQKLGLR 88
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A7K0QMM7_9ACTN (30S ribosomal protein S15 n=2 Tax=root TaxID=1 RepID=A0A7K0QMM7_9ACTN) HSP 1 Score: 77.0 bits (188), Expect = 1.000e-16 Identity = 38/79 (48.10%), Postives = 55/79 (69.62%), Query Frame = 1 Query: 10 QLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 246 +++ +F E+ DTGS RVQ+ALLT++I L EH ++HKKD ++R L M V +RRR L YL K D YRA++ +LG + Sbjct: 11 EIVEKFGENAQDTGSTRVQIALLTQRINDLTEHLRSHKKDHASRRGLLMLVGQRRRLLNYLQKRDLEGYRALVAELGLR 89
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Match: A0A1I3Y7N0_HALDA (30S ribosomal protein S15 n=24 Tax=Bacillaceae TaxID=186817 RepID=A0A1I3Y7N0_HALDA) HSP 1 Score: 76.6 bits (187), Expect = 1.390e-16 Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 1 RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLAMAVSKRRRFLRYLMKSDYSSYRAVIRDLGFK 246 R+ +LI ++ H DTGS VQ+A+LTEQIT LNEH +AHK+D ++R L V KRR L YL D + YR +I+ LG + Sbjct: 7 RKQELISEYKTHDNDTGSPEVQIAVLTEQITTLNEHLRAHKQDHHSRRGLLKMVGKRRNLLNYLRNKDITRYRELIKSLGLR 88 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72807.17293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72807.17293.1 >prot_M-pyrifera_M_contig72807.17293.1 ID=prot_M-pyrifera_M_contig72807.17293.1|Name=mRNA_M-pyrifera_M_contig72807.17293.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp RRHQLIRRFREHLFDTGSVRVQVALLTEQITALNEHTQAHKKDKDAKRRLback to top mRNA from alignment at M-pyrifera_M_contig72807:301..671+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72807.17293.1 ID=mRNA_M-pyrifera_M_contig72807.17293.1|Name=mRNA_M-pyrifera_M_contig72807.17293.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=371bp|location=Sequence derived from alignment at M-pyrifera_M_contig72807:301..671+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72807:301..671+ >mRNA_M-pyrifera_M_contig72807.17293.1 ID=mRNA_M-pyrifera_M_contig72807.17293.1|Name=mRNA_M-pyrifera_M_contig72807.17293.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig72807:301..671+ (Macrocystis pyrifera P11B4 male)back to top |