prot_M-pyrifera_M_contig7269.17265.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7269.17265.1
Unique Nameprot_M-pyrifera_M_contig7269.17265.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length155
Homology
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Match: D7FMH2_ECTSI (RibD_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH2_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 7.650e-61
Identity = 101/159 (63.52%), Postives = 119/159 (74.84%), Query Frame = 0
Query:    1 MVFYSAGCEETEARAVELAAGVKASQ-----GPGSSSPRKAAASGDSVDFIGLPPRDPGEGVPLNGVLEVLSKRGIDHVLVEGGPSVARGFLSEGLVDRAVIVRAPVEFPRPVPSGMTNRTLQLAGLELIGCTQWGDDEVEYWTRPGLNWPGGRIDRWP 154
            +VFYSAGCE+TEARA EL A VK S+      PG + P  +      VDF+G+P + PG GV L+GVL  L +RGIDHVLVEGGPSVARGFLSE LVDRA+I+RAP+EF RPVPS +   TL+ AGLEL+GCT+WGDDE E WTRPGL WPGG +  WP
Sbjct:  250 LVFYSAGCEDTEARAAELKADVKRSRTAVSDSPGETEPDTSHQKLAPVDFVGMPVQRPGAGVDLSGVLGALLERGIDHVLVEGGPSVARGFLSERLVDRAIIIRAPMEFVRPVPSDIATDTLRRAGLELVGCTKWGDDEAECWTRPGLGWPGGGVGSWP 408          
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Match: A0A836CBN8_9STRA (Riboflavin biosynthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN8_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.080e-38
Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 0
Query:   35 KAAASGDSVDFIGLP------PRD-PGEGVPLNGVLEVLSKRGIDHVLVEGGPSVARGFLSEGLVDRAVIVRAPVEFPRPVPSGMTNRTLQLAGLELIGCTQWGDDEVEYWTRPGLNWPGGRIDRWP 154
            KA A+   +  +GLP      P D P +G PL  V+  L +RGI H++VEGGP +AR FLS+ LVDRA+IV+APV+F +PVPSG+ +  L+ AGLEL+G TQWG DEVE W++PGL WP G +  WP
Sbjct:  122 KARAAELMLSVLGLPVMIDDIPTDTPEDGCPLLTVVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 248          
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Match: A0A7S2LDW0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LDW0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.140e-27
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 0
Query:   62 VLEVLSKRGIDHVLVEGGPSVARGFLSEGLVDRAVIVRAPVEFPRPVPSGMTNRTLQLAGLELIGCTQWGDDEVEYWTRPGLNWPG-GRIDRWP 154
            +++ L+ RG+ H++VEGGP+ AR FL  G+VDRA++VRAPVEF  PVP+ M   T++ AGL +IG T+ G D VEYWTR GL WP    +  WP
Sbjct:  207 IVQDLATRGLTHIMVEGGPATARAFLHSGVVDRAILVRAPVEFQEPVPAQMDEDTMKTAGLNMIGTTEMGGDVVEYWTREGLEWPNPDDLSSWP 300          
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Match: K0RZ71_THAOC (RibD_C domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZ71_THAOC)

HSP 1 Score: 107 bits (268), Expect = 4.180e-25
Identity = 50/93 (53.76%), Postives = 61/93 (65.59%), Query Frame = 0
Query:   62 VLEVLSKRGIDHVLVEGGPSVARGFLSEGLVDRAVIVRAPVEFPRPVPSGMTNRTLQLAGLELIGCTQWGDDEVEYWTRPGLNWPGGRIDRWP 154
            VL  L  RG+ H++VEGGP+ AR FL  G+VDRA++VRAPV+F  PVP+ M   TL  AGLE+IG    G D +EYW R G  WP G    WP
Sbjct:  261 VLRDLESRGLRHIMVEGGPATARAFLEAGVVDRAILVRAPVQFQIPVPAEMNEETLGRAGLEMIGSGDMGGDTIEYWVRKGSTWPAGE---WP 350          
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Match: B8BTJ7_THAPS (RibD_C domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTJ7_THAPS)

HSP 1 Score: 104 bits (259), Expect = 9.480e-24
Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 0
Query:   61 GVLEVLSKRGIDHVLVEGGPSVARGFLSEGLVDRAVIVRAPVEFPRPVPSGMTNRTLQLAGLELIGCTQWGDDEVEYWTRPGLNWPGGRIDRWP 154
            G+++ L+KRG++H++VEGG + AR FL+E  VDRA++VRA VEF  P P+ +   TL+ A L++IG T  G D VEYW+R  L WP   +  WP
Sbjct:  266 GIIDDLAKRGLNHIMVEGGAATARAFLNERAVDRAILVRASVEFQEPKPAQIDEDTLKAAELQMIGTTNMGSDIVEYWSRNELPWPDSTLPMWP 359          
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Match: A0A7S1HBG6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HBG6_HEMAN)

HSP 1 Score: 98.6 bits (244), Expect = 1.230e-23
Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 0
Query:   56 GVPLNGVLEVLSKRGIDHVLVEGGPSVARGFLSEGLVDRAVIVRAP-VEFPR-PVPSGMTNRTLQLAGLE-LIGCTQWGDDEVEYWTRPGLNWPGGRID---RWP 154
            G+ L   L+ +S+RG+  ++VEGGP+ ARGFL  GLVDRA+I++AP VEF + PVPS ++ RTL  AGLE L   T W  DE   W R G+ WP G+ +    WP
Sbjct:   23 GLDLRAALDAMSERGVRELMVEGGPATARGFLDAGLVDRAIIIKAPTVEFDQQPVPSHISERTLTDAGLEELARHTLWDGDETTLWARQGVQWPSGQGEDYASWP 127          
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Match: A0A6V8EGV0_9ARCH (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=4 Tax=Archaea TaxID=2157 RepID=A0A6V8EGV0_9ARCH)

HSP 1 Score: 97.1 bits (240), Expect = 5.280e-21
Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 0
Query:   56 GVPLNGVLEVLSKRGIDHVLVEGGPSVARGFLSEGLVDRAVIVRAPVEFPRPVPSGMTNRTLQLAGLELIGCTQWGDDEVEYWTRPGLNWPGGRIDRWP 154
            GV L+ +LE L   GI  +LVEGGP V   F+ EGLVDRA+I+++P E      SG+++  L   GL L+  TQWG+D V++W+RP L+WP    D WP
Sbjct:  268 GVDLSALLEHLGDIGIQELLVEGGPVVWAQFIEEGLVDRAIIIQSPNELGEGPRSGISDSKLSEVGLSLVEQTQWGEDSVQFWSRPELSWP---ADLWP 363          
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Match: A0A2E5X8P4_9EURY (Riboflavin biosynthesis protein RibD n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E5X8P4_9EURY)

HSP 1 Score: 94.0 bits (232), Expect = 7.280e-20
Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 0
Query:   56 GVPLNGVLEVLSKRGIDHVLVEGGPSVARGFLSEGLVDRAVIVRAPVEFPRPVPSGMTNRTLQLAGLELIGCTQWGDDEVEYWTRPGLNWPGGRIDRWP 154
            GV L+ +LE L  RG+  +LVEGGP+V R F+ EGLVDRA+I++          SG+++  L  AGL LI  T WG+D V++W+RP L WP      WP
Sbjct:  268 GVDLSALLEHLGDRGVQELLVEGGPTVWRQFIEEGLVDRAIIIQTSNTLGDGPTSGVSDSKLNQAGLNLIEKTTWGEDSVQFWSRPNLPWP---TKLWP 363          
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Match: A0A2E0K0L6_9EURY (Riboflavin biosynthesis protein RibD n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E0K0L6_9EURY)

HSP 1 Score: 92.0 bits (227), Expect = 3.730e-19
Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 0
Query:   56 GVPLNGVLEVLSKRGIDHVLVEGGPSVARGFLSEGLVDRAVIVRAPVEFPRPVPSGMTNRTLQLAGLELIGCTQWGDDEVEYWTRPGLNWPGGRIDRWP 154
            GV L  +LE L  RGI  +LVEGGP V + F+ EGLVDRA+++++         SG+++  L  AGL LI  T WGDD V++W+R  L WP   +D WP
Sbjct:  268 GVDLVALLEHLGDRGIQELLVEGGPIVWKQFIDEGLVDRAIVIQSQTLLGEGPASGISDSKLNDAGLNLIEQTTWGDDSVQFWSRTELPWP---MDLWP 363          
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Match: A0A1E7FVV4_9STRA (Dihydrofolate reductase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVV4_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.360e-19
Identity = 46/116 (39.66%), Postives = 72/116 (62.07%), Query Frame = 0
Query:   42 SVDFIG-LPPRDPGEG-VPLNGVLEVLSKR-GIDHVLVEGGPSVARGFLSEGLVDRAVIVRAPVEFPRPVPSGMTNRTLQLAGLELIGCTQWGDDEVEYWTRPGLNWPGGRIDRWP 154
            +V ++G LP  + G   +    + ++L +  G+ H++VEGGP+ A  FL E +VDRA+IV AP+ F  P+PS +T + L+ AGLEL+G  + G D V+ ++R  + WP   I  WP
Sbjct:  231 NVQYLGILPIGEQGTARISTRRICDILEEEFGLHHIMVEGGPNTALQFLKEKMVDRAIIVHAPMLFRDPLPSNITPKILEQAGLELVGSYKLGVDSVDCYSRSSIPWPSDPISSWP 346          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7269.17265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMH2_ECTSI7.650e-6163.52RibD_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A836CBN8_9STRA5.080e-3853.54Riboflavin biosynthesis protein n=1 Tax=Tribonema ... [more]
A0A7S2LDW0_9STRA1.140e-2753.19Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0RZ71_THAOC4.180e-2553.76RibD_C domain-containing protein n=1 Tax=Thalassio... [more]
B8BTJ7_THAPS9.480e-2448.94RibD_C domain-containing protein n=1 Tax=Thalassio... [more]
A0A7S1HBG6_HEMAN1.230e-2349.52Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6V8EGV0_9ARCH5.280e-2147.47Bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
A0A2E5X8P4_9EURY7.280e-2046.46Riboflavin biosynthesis protein RibD n=1 Tax=Eurya... [more]
A0A2E0K0L6_9EURY3.730e-1946.46Riboflavin biosynthesis protein RibD n=1 Tax=Eurya... [more]
A0A1E7FVV4_9STRA8.360e-1939.66Dihydrofolate reductase n=1 Tax=Fragilariopsis cyl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002734Bacterial bifunctional deaminase-reductase, C-terminalPFAMPF01872RibD_Ccoord: 56..102
e-value: 4.4E-10
score: 39.7
IPR024072Dihydrofolate reductase-like domain superfamilyGENE3D3.40.430.10coord: 8..138
e-value: 3.5E-15
score: 57.9
IPR024072Dihydrofolate reductase-like domain superfamilySUPERFAMILY53597Dihydrofolate reductase-likecoord: 34..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7269contigM-pyrifera_M_contig7269:3671..8596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7269.17265.1mRNA_M-pyrifera_M_contig7269.17265.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7269 3584..8802 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7269.17265.1 ID=prot_M-pyrifera_M_contig7269.17265.1|Name=mRNA_M-pyrifera_M_contig7269.17265.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
MVFYSAGCEETEARAVELAAGVKASQGPGSSSPRKAAASGDSVDFIGLPP
RDPGEGVPLNGVLEVLSKRGIDHVLVEGGPSVARGFLSEGLVDRAVIVRA
PVEFPRPVPSGMTNRTLQLAGLELIGCTQWGDDEVEYWTRPGLNWPGGRI
DRWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002734RibDG_C
IPR024072DHFR-like_dom_sf