prot_M-pyrifera_M_contig72349.17203.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72349.17203.1
Unique Nameprot_M-pyrifera_M_contig72349.17203.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length224
Homology
BLAST of mRNA_M-pyrifera_M_contig72349.17203.1 vs. uniprot
Match: A0A1Y1IHQ4_KLENI (Polyprenol reductase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHQ4_KLENI)

HSP 1 Score: 54.7 bits (130), Expect = 2.920e-5
Identity = 53/184 (28.80%), Postives = 82/184 (44.57%), Query Frame = 0
Query:   49 LLEHFVLHVPRAKCSCE--EGREKGSVLPLAVYVGGILHYIGAPLTF----SPLIGEYEGAPEYFVVIGFIVWMLGEMLQTWGHWELAEMRRRR---NSSKVYVIPDDGPFGLLSIAYPHYLGEILVYIG-ITLSDG--IPFLGCAAWTTSNLLVTASRGWLGYEERFGKAEWKRKGPQWVIIP 220
            LL   ++H  R  C     E    GS + +A YV G+ +Y+ APLT     S  +    G   +  V+G ++++   + Q      LA +R R    +   VY IP    F    +A PHYL EIL+Y+G + +S+G  +      +W  +NL   A      Y  +F     +RK     I+P
Sbjct:  141 LLALMLVHTARRLCESTMLEKHAPGSRMHIASYVYGLCYYVAAPLTLYVHRSKKVKTVWGLFSWHEVLGGLLFIFANIKQHQLGQILAGLRHRSGPFDKIPVYRIPRGDWFEW--VACPHYLAEILLYLGLVVVSEGKDLTIWLMFSWVVANLTYAAQLARRWYVTKFEDYPKERK----AIVP 318          
BLAST of mRNA_M-pyrifera_M_contig72349.17203.1 vs. uniprot
Match: A0A3P3YJJ2_PLABS (S5A_REDUCTASE domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJJ2_PLABS)

HSP 1 Score: 53.9 bits (128), Expect = 3.750e-5
Identity = 55/183 (30.05%), Postives = 77/183 (42.08%), Query Frame = 0
Query:   35 RPGLVLFGMHVLKRLLEHFVLHVPRAKCSCEEGREKGSVLPLAVYVGGILHYIGAPLTFSPLIGEYEGAPEYFVVIGFIVWMLGEMLQTWGHWELAEMRRRRNSSKVYVIPDDGPFGLLSIAYPHYLGEILVYIGITLSDGIPFLGCAAWTTSNLLV---TASRGWLGYEERFGKAEWKRKGP 214
            R    L   H  KR LE   LH    K S   GR     L    +VGG        LT S    E   A  +   +G +VW++G++   + HW LA +R+  +    +V+P  G F    +A PHYL EI+ ++G  LS    +     W +S  L    TA+  W   +       WKR  P
Sbjct:   79 RAAAALMIAHYTKRCLECLFLH----KFS---GRTN---LWTIAFVGGGYTLSSVILT-STAPAEGSAAVAH---LGLLVWLVGQLGNFYHHWLLANLRKPGDMR--HVVPRGGLFAY--VASPHYLFEIVSWVGAALSISTWYAWAMVWFSSWYLAGRATATLDWYAKKGMRTPPGWKRLVP 243          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72349.17203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1Y1IHQ4_KLENI2.920e-528.80Polyprenol reductase n=1 Tax=Klebsormidium nitens ... [more]
A0A3P3YJJ2_PLABS3.750e-530.05S5A_REDUCTASE domain-containing protein n=2 Tax=Pl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminalPFAMPF02544Steroid_dhcoord: 104..223
e-value: 3.5E-11
score: 43.3
IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminalPROSITEPS50244S5A_REDUCTASEcoord: 111..194
score: 13.348
NoneNo IPR availablePANTHERPTHR14624:SF0POLYPRENOL REDUCTASEcoord: 38..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..223
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 176..198
IPR039698Polyprenol reductasePANTHERPTHR14624DFG10 PROTEINcoord: 38..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72349contigM-pyrifera_M_contig72349:445..1116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72349.17203.1mRNA_M-pyrifera_M_contig72349.17203.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72349 445..1116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72349.17203.1 ID=prot_M-pyrifera_M_contig72349.17203.1|Name=mRNA_M-pyrifera_M_contig72349.17203.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp
VPKVFFWHFYAVALVGVLGVGIGVEAFGWGGGNVRPGLVLFGMHVLKRLL
EHFVLHVPRAKCSCEEGREKGSVLPLAVYVGGILHYIGAPLTFSPLIGEY
EGAPEYFVVIGFIVWMLGEMLQTWGHWELAEMRRRRNSSKVYVIPDDGPF
GLLSIAYPHYLGEILVYIGITLSDGIPFLGCAAWTTSNLLVTASRGWLGY
EERFGKAEWKRKGPQWVIIPEVW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0011043-oxo-5_a-steroid_4-DH_C
IPR039698Dfg10/SRD5A3