prot_M-pyrifera_M_contig72349.17203.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig72349.17203.1
Unique Name	prot_M-pyrifera_M_contig72349.17203.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	224

Homology

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BLAST of mRNA_M-pyrifera_M_contig72349.17203.1 vs. uniprot
Match: A0A1Y1IHQ4_KLENI (Polyprenol reductase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHQ4_KLENI)

HSP 1 Score: 54.7 bits (130), Expect = 2.920e-5
Identity = 53/184 (28.80%), Postives = 82/184 (44.57%), Query Frame = 0

Query:   49 LLEHFVLHVPRAKCSCE--EGREKGSVLPLAVYVGGILHYIGAPLTF----SPLIGEYEGAPEYFVVIGFIVWMLGEMLQTWGHWELAEMRRRR---NSSKVYVIPDDGPFGLLSIAYPHYLGEILVYIG-ITLSDG--IPFLGCAAWTTSNLLVTASRGWLGYEERFGKAEWKRKGPQWVIIP 220
            LL   ++H  R  C     E    GS + +A YV G+ +Y+ APLT     S  +    G   +  V+G ++++   + Q      LA +R R    +   VY IP    F    +A PHYL EIL+Y+G + +S+G  +      +W  +NL   A      Y  +F     +RK     I+P
Sbjct:  141 LLALMLVHTARRLCESTMLEKHAPGSRMHIASYVYGLCYYVAAPLTLYVHRSKKVKTVWGLFSWHEVLGGLLFIFANIKQHQLGQILAGLRHRSGPFDKIPVYRIPRGDWFEW--VACPHYLAEILLYLGLVVVSEGKDLTIWLMFSWVVANLTYAAQLARRWYVTKFEDYPKERK----AIVP 318

[Close]

BLAST of mRNA_M-pyrifera_M_contig72349.17203.1 vs. uniprot
Match: A0A3P3YJJ2_PLABS (S5A_REDUCTASE domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJJ2_PLABS)

HSP 1 Score: 53.9 bits (128), Expect = 3.750e-5
Identity = 55/183 (30.05%), Postives = 77/183 (42.08%), Query Frame = 0

Query:   35 RPGLVLFGMHVLKRLLEHFVLHVPRAKCSCEEGREKGSVLPLAVYVGGILHYIGAPLTFSPLIGEYEGAPEYFVVIGFIVWMLGEMLQTWGHWELAEMRRRRNSSKVYVIPDDGPFGLLSIAYPHYLGEILVYIGITLSDGIPFLGCAAWTTSNLLV---TASRGWLGYEERFGKAEWKRKGP 214
            R    L   H  KR LE   LH    K S   GR     L    +VGG        LT S    E   A  +   +G +VW++G++   + HW LA +R+  +    +V+P  G F    +A PHYL EI+ ++G  LS    +     W +S  L    TA+  W   +       WKR  P
Sbjct:   79 RAAAALMIAHYTKRCLECLFLH----KFS---GRTN---LWTIAFVGGGYTLSSVILT-STAPAEGSAAVAH---LGLLVWLVGQLGNFYHHWLLANLRKPGDMR--HVVPRGGLFAY--VASPHYLFEIVSWVGAALSISTWYAWAMVWFSSWYLAGRATATLDWYAKKGMRTPPGWKRLVP 243

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig72349.17203.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig72349.17203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A1Y1IHQ4_KLENI	2.920e-5	28.80	Polyprenol reductase n=1 Tax=Klebsormidium nitens ...	[more]
A0A3P3YJJ2_PLABS	3.750e-5	30.05	S5A_REDUCTASE domain-containing protein n=2 Tax=Pl...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001104	3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal	PFAM	PF02544	Steroid_dh	coord: 104..223 e-value: 3.5E-11 score: 43.3
IPR001104	3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal	PROSITE	PS50244	S5A_REDUCTASE	coord: 111..194 score: 13.348
None	No IPR available	PANTHER	PTHR14624:SF0	POLYPRENOL REDUCTASE	coord: 38..223
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 95..105
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 76..94
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..27
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 28..75
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 106..127
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 128..223
None	No IPR available	TMHMM	TMhelix		coord: 150..172
None	No IPR available	TMHMM	TMhelix		coord: 71..93
None	No IPR available	TMHMM	TMhelix		coord: 108..130
None	No IPR available	TMHMM	TMhelix		coord: 5..27
None	No IPR available	TMHMM	TMhelix		coord: 176..198
IPR039698	Polyprenol reductase	PANTHER	PTHR14624	DFG10 PROTEIN	coord: 38..223

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig72349	contig	M-pyrifera_M_contig72349:445..1116 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig72349.17203.1	mRNA_M-pyrifera_M_contig72349.17203.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig72349 445..1116 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig72349.17203.1 ID=prot_M-pyrifera_M_contig72349.17203.1|Name=mRNA_M-pyrifera_M_contig72349.17203.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp
VPKVFFWHFYAVALVGVLGVGIGVEAFGWGGGNVRPGLVLFGMHVLKRLL
EHFVLHVPRAKCSCEEGREKGSVLPLAVYVGGILHYIGAPLTFSPLIGEY
EGAPEYFVVIGFIVWMLGEMLQTWGHWELAEMRRRRNSSKVYVIPDDGPF
GLLSIAYPHYLGEILVYIGITLSDGIPFLGCAAWTTSNLLVTASRGWLGY
EERFGKAEWKRKGPQWVIIPEVW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001104	3-oxo-5_a-steroid_4-DH_C
IPR039698	Dfg10/SRD5A3