prot_M-pyrifera_M_contig7174.17090.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7174.17090.1
Unique Nameprot_M-pyrifera_M_contig7174.17090.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length74
Homology
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BLAST of mRNA_M-pyrifera_M_contig7174.17090.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 3.240e-9
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:    1 MASIDDTARRYEEALSELVRLLEEKSGKTEILRFLTFRLDFND 43
            M +I+DTARR+EE LSEL  +LE+K GK EILRFL FRLDFN+
Sbjct:  840 MGNIEDTARRFEEKLSELRCMLEQKCGKMEILRFLIFRLDFNE 882
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BLAST of mRNA_M-pyrifera_M_contig7174.17090.1 vs. uniprot
Match: A0A835YR49_9STRA (Spindle pole body component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR49_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.140e-8
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 0 
Query:    1 MASIDDTARRYEEALSELVRLLEEKSGKTEILRFLTFRLDFNDYYKERRAAVVSPLPPRQDGG 63
            +A + +T RRYE A SEL+ +LE +S ++EILR L FRLDFN Y+  RRAA   P P     G
Sbjct:  982 LAHLAETGRRYERAFSELLVMLETESVRSEILRHLVFRLDFNLYHS-RRAAAQPPAPSHAKAG 1043
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BLAST of mRNA_M-pyrifera_M_contig7174.17090.1 vs. uniprot
Match: A0A7S3H0B4_9STRA (Spindle pole body component n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H0B4_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.290e-7
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0 
Query:    1 MASIDDTARRYEEALSELVRLLEEKSGKTEILRFLTFRLDFNDYYKERRAAVVS 54
            ++ ID+  + Y     +L+ +L+E+S KTE LRFLTFRLDFNDY+  +RA   S
Sbjct:   89 VSRIDEAVKEYSTQFEKLMFMLKEQSEKTEYLRFLTFRLDFNDYHAHQRAQGAS 142
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7174.17090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6W1_ECTSI3.240e-969.77Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
A0A835YR49_9STRA1.140e-850.79Spindle pole body component n=1 Tax=Tribonema minu... [more]
A0A7S3H0B4_9STRA1.290e-748.15Spindle pole body component n=1 Tax=Spumella elong... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7174contigM-pyrifera_M_contig7174:1352..4031 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7174.17090.1mRNA_M-pyrifera_M_contig7174.17090.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7174 1329..4059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7174.17090.1 ID=prot_M-pyrifera_M_contig7174.17090.1|Name=mRNA_M-pyrifera_M_contig7174.17090.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp
MASIDDTARRYEEALSELVRLLEEKSGKTEILRFLTFRLDFNDYYKERRA
AVVSPLPPRQDGGHGQISSRSKQ*
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