prot_M-pyrifera_M_contig71156.16971.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig71156.16971.1
Unique Nameprot_M-pyrifera_M_contig71156.16971.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length220
Homology
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BLAST of mRNA_M-pyrifera_M_contig71156.16971.1 vs. uniprot
Match: A0A7S2U2J4_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U2J4_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 1.460e-17
Identity = 65/194 (33.51%), Postives = 94/194 (48.45%), Query Frame = 0 
Query:    6 PALLLVLMYSASMTVRSTLSFPFLRTLVECKHHTPSNFDRSSRDWSGSAKCNNSATVIETAQLYRGFASGTDLAVQCVTLPAAGHLADSLGRR---TMAMHSIWMFFFASALFLLGAAWQDYVTY-YVGFVVQSFGGILGIVVSTQVADVIPNPDQRGLIVGLYTAISVLFGVIATVIANVAVIAMNPVDYSEP 195
            P L  V++Y+A+ T +  L F FLR+ + C   TP++FDRSS DWSGS  CN+   V   A L +G A+G +   Q   LPAAG +ADSLGR    T++         A A+  L +     V    V  +++ F     ++    V D+  +   RG + G      ++   I   I    VIA N  DY+ P
Sbjct:   62 PLLSFVMVYAAANTTKGLLFFFFLRSTIVCGEETPADFDRSSSDWSGSRYCNDRCRVARDATLIKGIANGIEHFGQLFCLPAAGVIADSLGRNFPFTVSFAGFSASMLALAVAALVSRGPSVVPLAMVSSLLRGFTDSFHVMRQVSVTDMFSSAKGRGYVYGNIIVFRIICSGIVAFILTATVIAENTYDYAAP 255
[Close]
BLAST of mRNA_M-pyrifera_M_contig71156.16971.1 vs. uniprot
Match: A0A7S3YTJ5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YTJ5_9EUKA)

HSP 1 Score: 84.7 bits (208), Expect = 2.110e-15
Identity = 61/182 (33.52%), Postives = 89/182 (48.90%), Query Frame = 0 
Query:   19 TVRSTLSFPFLRTLVECKHHTPSNFDRSSRDWSGSAKCNNSATVIETAQLYRGFASGTDLAVQCVTLPAAGHLADSLGRR-TMAMHSIWMFFFASALFLLGAAWQDY-----VTYYVGFVVQSFGGILGIVVSTQVADVIPNPDQRGLIVGLYTAISVLFGVIATVIANVAVIAMNPVDYSE 194
            T R  L F FLRT ++C   TP +FDR+SRDWSGS  C++   V   AQL  G + G +   Q + LP  G L+D+ GRR T+ +  I +   AS   L  AA Q       +  +    V+ F     +  +  VAD+      RG + G+     +    +ATVI   +VI+ N  +Y +
Sbjct:   72 TCRLLLYFVFLRTTIKCTTATPDDFDRNSRDWSGSKYCSDRCEVASEAQLLMGISEGIEQVAQFLMLPFLGVLSDAFGRRLTLTITEIGLT--ASTALLAVAAMQRTGPLIAILVFSSAAVRGFTNSFTVSTNAAVADLFQETKTRGHVYGVLQVYVLSIDGLATVIITASVISQNRYNYDD 251
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71156.16971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2U2J4_9EUKA1.460e-1733.51Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3YTJ5_9EUKA2.110e-1533.52Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 74..214
e-value: 6.7E-10
score: 38.4
NoneNo IPR availableGENE3D1.20.1250.20coord: 6..220
e-value: 9.3E-16
score: 59.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 122..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 185..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..184
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.624
NoneNo IPR availableTMHMMTMhelixcoord: 161..183
NoneNo IPR availableTMHMMTMhelixcoord: 124..146
NoneNo IPR availableTMHMMTMhelixcoord: 196..218
NoneNo IPR availableTMHMMTMhelixcoord: 100..119
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 1..220
score: 9.634
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 71..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71156contigM-pyrifera_M_contig71156:250..978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71156.16971.1mRNA_M-pyrifera_M_contig71156.16971.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig71156 250..978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig71156.16971.1 ID=prot_M-pyrifera_M_contig71156.16971.1|Name=mRNA_M-pyrifera_M_contig71156.16971.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
LRGLIPALLLVLMYSASMTVRSTLSFPFLRTLVECKHHTPSNFDRSSRDW
SGSAKCNNSATVIETAQLYRGFASGTDLAVQCVTLPAAGHLADSLGRRTM
AMHSIWMFFFASALFLLGAAWQDYVTYYVGFVVQSFGGILGIVVSTQVAD
VIPNPDQRGLIVGLYTAISVLFGVIATVIANVAVIAMNPVDYSEPASVLF
IISCLVVIGVFVIFPETLSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
IPR036259MFS_trans_sf