prot_M-pyrifera_M_contig70585.16847.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig70585.16847.1
Unique Name	prot_M-pyrifera_M_contig70585.16847.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	108

Homology

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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A6J0BAP8_NEOLC (polypyrimidine tract-binding protein 1-like n=1 Tax=Neodiprion lecontei TaxID=441921 RepID=A0A6J0BAP8_NEOLC)

HSP 1 Score: 75.5 bits (184), Expect = 2.040e-14
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    1 MRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 108
            M Y +++ +LY IF+RFG+ L+ V F   S               S  AL++     AA TA   LDG+ IY SC  LR+ YS   SL V+YNN+KS D+T P L  G
Sbjct:  119 MIYPISLDILYQIFTRFGKVLKIVTFTKNS---------------SFQALIQYPDMVAAQTAKFSLDGQNIYNSCCTLRIDYSKMQSLNVKYNNDKSRDYTNPTLPTG 211

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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: H3EEP2_PRIPA (Ptb-1 n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=H3EEP2_PRIPA)

HSP 1 Score: 77.4 bits (189), Expect = 2.390e-14
Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 0

Query:    1 MRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 108
            M Y V + +LY++FSR+G+ LR + F                  ++  ALV++  A +A TA   L+ +CIY  C  LR+ YS  S+L ++YNN+KS D+T P+L  G
Sbjct:  165 MLYPVTLEILYNVFSRYGKVLRIITF---------------NKNNTFQALVQLSEANSAQTAKAALENQCIYNGCCTLRIDYSKLSTLNIKYNNDKSRDYTNPNLPAG 257

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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A0B7A9S1_9EUPU (RRM domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7A9S1_9EUPU)

HSP 1 Score: 73.9 bits (180), Expect = 4.610e-14
Identity = 38/103 (36.89%), Postives = 61/103 (59.22%), Query Frame = 0

Query:    3 YLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDL 105
            Y V++ +L+ +F +FG+ L+ + F   +               +  AL++M  A +AA A   LDG+ IY  CN L++ YS  S+L+V+YNN+KS D+T+PDL
Sbjct:   47 YPVSLDILHQLFIKFGKVLKIITFTKNN---------------TFQALIQMSDAISAAAAKTSLDGQNIYNGCNTLKIDYSKLSNLSVKYNNDKSRDFTRPDL 134

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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A0R3RNX6_9BILA (RRM domain-containing protein n=1 Tax=Elaeophora elaphi TaxID=1147741 RepID=A0A0R3RNX6_9BILA)

HSP 1 Score: 72.8 bits (177), Expect = 6.610e-14
Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0

Query:    1 MRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 108
            M Y V + VL+ IFSR+G+ LR + F                  ++  ALV++  A +A  A + LDG+ +Y  C  LR+ YS  ++L V+YNN+KS D+T P+L  G
Sbjct:   51 MLYPVTLDVLHQIFSRYGKVLRIITF---------------NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLPSG 143

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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A0G4HJM0_9ALVE (Uncharacterized protein (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HJM0_9ALVE)

HSP 1 Score: 75.5 bits (184), Expect = 6.630e-14
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 0

Query:    3 YLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 108
            Y +++ +++ +F +FG  LR  +F   ++        T EPP+ +  LVE    E A  AL+ L+GRCIY  CN L ++YS  + LTVR NNE++ D+T P+L  G
Sbjct:  123 YQIDLDLIHSLFCKFGNILRMAIFNRPNKKD------TKEPPT-VQCLVEYARVEEAIQALQTLNGRCIYAGCNELEIQYSKLNQLTVRQNNERTRDFTNPNLPQG 221

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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A1I7VBZ5_LOALO (RRM domain-containing protein n=1 Tax=Loa loa TaxID=7209 RepID=A0A1I7VBZ5_LOALO)

HSP 1 Score: 74.7 bits (182), Expect = 6.880e-14
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 0

Query:    1 MRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 108
            M Y V + VLY IFSR+G+ LR + F                  ++  ALV++  A +A  A + LDG+ +Y  C  LR+ YS  ++L V+YNN+KS D+T P+L  G
Sbjct:   52 MLYPVTLDVLYQIFSRYGKVLRIITF---------------NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLPSG 144

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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: UPI001652677A (polypyrimidine tract-binding protein 2-like n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI001652677A)

HSP 1 Score: 75.9 bits (185), Expect = 7.370e-14
Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 0

Query:    3 YLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 108
            Y V++ +L+ +F++FG+ L+ + F   +               +  AL++M  A +AA A   LDG+ IY  CN L++ YS  S+L V+YNN+KS D+T+PDL  G
Sbjct:  275 YPVSLEILHQLFNKFGKVLKIITFTKNN---------------TFQALIQMSDAISAAAAKTSLDGQNIYNGCNTLKIDYSKLSNLNVKYNNDKSRDFTRPDLPTG 365

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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: UPI001D06F383 (polypyrimidine tract-binding protein 1 isoform X1 n=5 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D06F383)

HSP 1 Score: 75.9 bits (185), Expect = 8.410e-14
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    1 MRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 108
            M Y +NV +LY IF RFG+ L+ V F   +               S  AL++     +A  A + LDG+ IY SC  LR+ YS  SSL V+YNN+KS D+T P L  G
Sbjct:  231 MVYPINVDILYVIFQRFGKVLKIVTFTKNN---------------SFQALIQYPDTGSAQAAKQALDGQNIYNSCCTLRIDYSKMSSLNVKYNNDKSRDYTNPTLPSG 323

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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: UPI00065B6221 (polypyrimidine tract-binding protein 2 isoform X1 n=4 Tax=Aplysia californica TaxID=6500 RepID=UPI00065B6221)

HSP 1 Score: 75.9 bits (185), Expect = 8.460e-14
Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 0

Query:    3 YLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 108
            Y V++ +L+ +F++FG+ L+ + F   +               +  AL++M  A +AA A   LDG+ IY  CN L++ YS  S+L V+YNN+KS D+T+PDL  G
Sbjct:  275 YPVSLEILHQLFNKFGKVLKIITFTKNN---------------TFQALIQMSDAISAAAAKTSLDGQNIYNGCNTLKIDYSKLSNLNVKYNNDKSRDFTRPDLPTG 365

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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A6J0BTP4_NEOLC (polypyrimidine tract-binding protein 1 n=31 Tax=Hymenoptera TaxID=7399 RepID=A0A6J0BTP4_NEOLC)

HSP 1 Score: 75.5 bits (184), Expect = 1.140e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 0

Query:    1 MRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 108
            M Y +++ +LY IF+RFG+ L+ V F   S               S  AL++     AA TA   LDG+ IY SC  LR+ YS   SL V+YNN+KS D+T P L  G
Sbjct:  212 MIYPISLDILYQIFTRFGKVLKIVTFTKNS---------------SFQALIQYPDMVAAQTAKFSLDGQNIYNSCCTLRIDYSKMQSLNVKYNNDKSRDYTNPTLPTG 304

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6J0BAP8_NEOLC	2.040e-14	40.74	polypyrimidine tract-binding protein 1-like n=1 Ta...	[more]
H3EEP2_PRIPA	2.390e-14	37.04	Ptb-1 n=2 Tax=Pristionchus pacificus TaxID=54126 R...	[more]
A0A0B7A9S1_9EUPU	4.610e-14	36.89	RRM domain-containing protein (Fragment) n=1 Tax=A...	[more]
A0A0R3RNX6_9BILA	6.610e-14	37.04	RRM domain-containing protein n=1 Tax=Elaeophora e...	[more]
A0A0G4HJM0_9ALVE	6.630e-14	38.68	Uncharacterized protein (Fragment) n=1 Tax=Chromer...	[more]
A0A1I7VBZ5_LOALO	6.880e-14	37.96	RRM domain-containing protein n=1 Tax=Loa loa TaxI...	[more]
UPI001652677A	7.370e-14	36.79	polypyrimidine tract-binding protein 2-like n=1 Ta...	[more]
UPI001D06F383	8.410e-14	40.74	polypyrimidine tract-binding protein 1 isoform X1 ...	[more]
UPI00065B6221	8.460e-14	36.79	polypyrimidine tract-binding protein 2 isoform X1 ...	[more]
A0A6J0BTP4_NEOLC	1.140e-13	40.74	polypyrimidine tract-binding protein 1 n=31 Tax=Hy...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..108 e-value: 1.1E-19 score: 72.5
None	No IPR available	PANTHER	PTHR15592	MATRIN 3/NUCLEAR PROTEIN 220-RELATED	coord: 3..106
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig70585	contig	M-pyrifera_M_contig70585:62..427 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig70585.16847.1	mRNA_M-pyrifera_M_contig70585.16847.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig70585 62..454 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig70585.16847.1 ID=prot_M-pyrifera_M_contig70585.16847.1|Name=mRNA_M-pyrifera_M_contig70585.16847.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
MRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAAL
VEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADW
TKPDLGPG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf