mRNA_M-pyrifera_M_contig70585.16847.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70585.16847.1
Unique NamemRNA_M-pyrifera_M_contig70585.16847.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A6J0BAP8_NEOLC (polypyrimidine tract-binding protein 1-like n=1 Tax=Neodiprion lecontei TaxID=441921 RepID=A0A6J0BAP8_NEOLC)

HSP 1 Score: 79.3 bits (194), Expect = 9.510e-16
Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 1 
Query:    4 VLHVTITEMRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 351
            VL V I  M Y +++ +LY IF+RFG+ L+ V F   S               S  AL++     AA TA   LDG+ IY SC  LR+ YS   SL V+YNN+KS D+T P L  G
Sbjct:  111 VLRVIIEHMIYPISLDILYQIFTRFGKVLKIVTFTKNS---------------SFQALIQYPDMVAAQTAKFSLDGQNIYNSCCTLRIDYSKMQSLNVKYNNDKSRDYTNPTLPTG 211
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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A0G4HJM0_9ALVE (Uncharacterized protein (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HJM0_9ALVE)

HSP 1 Score: 80.5 bits (197), Expect = 1.320e-15
Identity = 44/117 (37.61%), Postives = 70/117 (59.83%), Query Frame = 1 
Query:    1 RVLHVTITEMRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 351
            R+L +T+  + Y +++ +++ +F +FG  LR  +F   ++        T EPP+ +  LVE    E A  AL+ L+GRCIY  CN L ++YS  + LTVR NNE++ D+T P+L  G
Sbjct:  112 RLLLITVNNLVYQIDLDLIHSLFCKFGNILRMAIFNRPNKKD------TKEPPT-VQCLVEYARVEEAIQALQTLNGRCIYAGCNELEIQYSKLNQLTVRQNNERTRDFTNPNLPQG 221
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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: H3EEP2_PRIPA (Ptb-1 n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=H3EEP2_PRIPA)

HSP 1 Score: 81.3 bits (199), Expect = 1.470e-15
Identity = 44/116 (37.93%), Postives = 65/116 (56.03%), Query Frame = 1 
Query:    4 VLHVTITEMRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 351
            VL V I  M Y V + +LY++FSR+G+ LR + F                  ++  ALV++  A +A TA   L+ +CIY  C  LR+ YS  S+L ++YNN+KS D+T P+L  G
Sbjct:  157 VLRVIIENMLYPVTLEILYNVFSRYGKVLRIITF---------------NKNNTFQALVQLSEANSAQTAKAALENQCIYNGCCTLRIDYSKLSTLNIKYNNDKSRDYTNPNLPAG 257
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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A0R3RNX6_9BILA (RRM domain-containing protein n=1 Tax=Elaeophora elaphi TaxID=1147741 RepID=A0A0R3RNX6_9BILA)

HSP 1 Score: 76.6 bits (187), Expect = 2.890e-15
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 1 
Query:    4 VLHVTITEMRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 351
            VL V I  M Y V + VL+ IFSR+G+ LR + F                  ++  ALV++  A +A  A + LDG+ +Y  C  LR+ YS  ++L V+YNN+KS D+T P+L  G
Sbjct:   43 VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITF---------------NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLPSG 143
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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A1I7VBZ5_LOALO (RRM domain-containing protein n=1 Tax=Loa loa TaxID=7209 RepID=A0A1I7VBZ5_LOALO)

HSP 1 Score: 78.6 bits (192), Expect = 3.370e-15
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 1 
Query:    4 VLHVTITEMRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 351
            VL V I  M Y V + VLY IFSR+G+ LR + F                  ++  ALV++  A +A  A + LDG+ +Y  C  LR+ YS  ++L V+YNN+KS D+T P+L  G
Sbjct:   44 VLRVIIENMLYPVTLDVLYQIFSRYGKVLRIITF---------------NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLPSG 144
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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: UPI001D06F383 (polypyrimidine tract-binding protein 1 isoform X1 n=5 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D06F383)

HSP 1 Score: 79.7 bits (195), Expect = 5.200e-15
Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 1 
Query:    4 VLHVTITEMRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 351
            VL V I  M Y +NV +LY IF RFG+ L+ V F   +               S  AL++     +A  A + LDG+ IY SC  LR+ YS  SSL V+YNN+KS D+T P L  G
Sbjct:  223 VLRVIIEHMVYPINVDILYVIFQRFGKVLKIVTFTKNN---------------SFQALIQYPDTGSAQAAKQALDGQNIYNSCCTLRIDYSKMSSLNVKYNNDKSRDYTNPTLPSG 323
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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A0M3IVI3_ASCLU (RRM domain-containing protein n=1 Tax=Ascaris lumbricoides TaxID=6252 RepID=A0A0M3IVI3_ASCLU)

HSP 1 Score: 76.3 bits (186), Expect = 5.770e-15
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 1 
Query:    4 VLHVTITEMRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 351
            VL V I  M Y V + VL+ IFSR+G+ LR + F                  ++  ALV++  A +A  A + LDG+ +Y  C  LR+ YS  ++L V+YNN+KS D+T P+L  G
Sbjct:   47 VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITF---------------NKNNTFQALVQLSEATSAQMARQSLDGQNVYNGCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLPSG 147
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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: A0A6J0BTP4_NEOLC (polypyrimidine tract-binding protein 1 n=31 Tax=Hymenoptera TaxID=7399 RepID=A0A6J0BTP4_NEOLC)

HSP 1 Score: 79.3 bits (194), Expect = 7.050e-15
Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 1 
Query:    4 VLHVTITEMRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 351
            VL V I  M Y +++ +LY IF+RFG+ L+ V F   S               S  AL++     AA TA   LDG+ IY SC  LR+ YS   SL V+YNN+KS D+T P L  G
Sbjct:  204 VLRVIIEHMIYPISLDILYQIFTRFGKVLKIVTFTKNS---------------SFQALIQYPDMVAAQTAKFSLDGQNIYNSCCTLRIDYSKMQSLNVKYNNDKSRDYTNPTLPTG 304
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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: UPI000C2038B6 (polypyrimidine tract-binding protein 1 n=1 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C2038B6)

HSP 1 Score: 79.0 bits (193), Expect = 8.620e-15
Identity = 46/116 (39.66%), Postives = 64/116 (55.17%), Query Frame = 1 
Query:    4 VLHVTITEMRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 351
            VL V I  M Y +++ +LY IF RFG+ L+ V F   +               S  AL++    ++A  A + LDG+ IY SC  LR+ YS  SSL V+YNN+KS D+T P+L  G
Sbjct:   52 VLRVIIEHMIYPISLDILYVIFQRFGKVLKIVTFTKNN---------------SFQALIQYPDTQSAQAAKQALDGQNIYNSCCTLRIDYSKMSSLNVKYNNDKSRDYTNPNLPTG 152
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BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Match: D3B4Z4_POLPP (RNA-binding region RNP-1 domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B4Z4_POLPP)

HSP 1 Score: 78.6 bits (192), Expect = 1.230e-14
Identity = 42/116 (36.21%), Postives = 72/116 (62.07%), Query Frame = 1 
Query:    4 VLHVTITEMRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAALVEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADWTKPDLGPG 351
            +L VTI+ + Y V + VLY +FS++G  L+ ++F   S+S             +  +L+++ T ++A  A +ELDG+ IY  C  L+++YS+ ++L ++YNN+KS D+T P L PG
Sbjct:  138 ILLVTISNIIYPVTIDVLYQLFSKYGSVLKILIF---SKS------------GNFQSLIQLHTTDSAINAKRELDGQNIYNGCCTLKIQYSSLNNLRIKYNNDKSRDFTNPTLLPG 238
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70585.16847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6J0BAP8_NEOLC9.510e-1641.38polypyrimidine tract-binding protein 1-like n=1 Ta... [more]
A0A0G4HJM0_9ALVE1.320e-1537.61Uncharacterized protein (Fragment) n=1 Tax=Chromer... [more]
H3EEP2_PRIPA1.470e-1537.93Ptb-1 n=2 Tax=Pristionchus pacificus TaxID=54126 R... [more]
A0A0R3RNX6_9BILA2.890e-1537.93RRM domain-containing protein n=1 Tax=Elaeophora e... [more]
A0A1I7VBZ5_LOALO3.370e-1538.79RRM domain-containing protein n=1 Tax=Loa loa TaxI... [more]
UPI001D06F3835.200e-1541.38polypyrimidine tract-binding protein 1 isoform X1 ... [more]
A0A0M3IVI3_ASCLU5.770e-1537.93RRM domain-containing protein n=1 Tax=Ascaris lumb... [more]
A0A6J0BTP4_NEOLC7.050e-1541.38polypyrimidine tract-binding protein 1 n=31 Tax=Hy... [more]
UPI000C2038B68.620e-1539.66polypyrimidine tract-binding protein 1 n=1 Tax=Ont... [more]
D3B4Z4_POLPP1.230e-1436.21RNA-binding region RNP-1 domain-containing protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70585contigM-pyrifera_M_contig70585:62..454 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score76.3
Seed ortholog evalue1e-11
Seed eggNOG ortholog6500.XP_005095787.1
Preferred namePTBP2
KEGG koko:K08524,ko:K13218,ko:K14948,ko:K17844
KEGG Pathwayko03320,ko04151,ko04659,ko04919,ko04920,ko04932,ko04976,ko05160,ko05200,ko05202,ko05216,ko05222,ko05223,ko05226,map03320,map04151,map04659,map04919,map04920,map04932,map04976,map05160,map05200,map05202,map05216,map05222,map05223,map05226
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000014,GO:0000226,GO:0000245,GO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0000900,GO:0000956,GO:0001067,GO:0001069,GO:0002009,GO:0002165,GO:0002791,GO:0002793,GO:0003006,GO:0003205,GO:0003231,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0003727,GO:0003729,GO:0003730,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006355,GO:0006357,GO:0006376,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007292,GO:0007308,GO:0007309,GO:0007319,GO:0007349,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007444,GO:0007472,GO:0007476,GO:0007507,GO:0007552,GO:0007560,GO:0008103,GO:0008150,GO:0008152,GO:0008187,GO:0008380,GO:0008543,GO:0008586,GO:0008587,GO:0009056,GO:0009057,GO:0009653,GO:0009719,GO:0009791,GO:0009798,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0009994,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010720,GO:0010817,GO:0010975,GO:0010976,GO:0016032,GO:0016043,GO:0016070,GO:0016071,GO:0016325,GO:0016787,GO:0016788,GO:0017148,GO:0019080,GO:0019081,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019953,GO:0021510,GO:0021549,GO:0021700,GO:0022008,GO:0022037,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030371,GO:0030424,GO:0030426,GO:0030427,GO:0030902,GO:0030951,GO:0030952,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031344,GO:0031346,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032024,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032991,GO:0033043,GO:0033119,GO:0033267,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034655,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0035303,GO:0035304,GO:0035306,GO:0035307,GO:0036002,GO:0036477,GO:0042127,GO:0042221,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043487,GO:0043488,GO:0043489,GO:0043565,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044297,GO:0044306,GO:0044344,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0045182,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045666,GO:0045727,GO:0045893,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046011,GO:0046483,GO:0046700,GO:0046883,GO:0046887,GO:0048024,GO:0048025,GO:0048232,GO:0048255,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048584,GO:0048599,GO:0048609,GO:0048646,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0050684,GO:0050686,GO:0050708,GO:0050714,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050796,GO:0050848,GO:0050850,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051147,GO:0051148,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0051716,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060322,GO:0060429,GO:0060562,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070848,GO:0070884,GO:0070886,GO:0070887,GO:0070935,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0071826,GO:0071840,GO:0072359,GO:0075522,GO:0080090,GO:0090079,GO:0090087,GO:0090276,GO:0090277,GO:0090304,GO:0090305,GO:0097159,GO:0097458,GO:0106056,GO:0106058,GO:0120025,GO:0120035,GO:0120038,GO:0140097,GO:0150034,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902369,GO:1902373,GO:1902531,GO:1902533,GO:1902680,GO:1903311,GO:1903312,GO:1903506,GO:1903508,GO:1903530,GO:1903532,GO:1904409,GO:1904411,GO:1904951,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000177,GO:2001141
EggNOG free text desc.regulation of secretory granule organization
EggNOG OGs38H7H@33154,3B9RH@33208,3CRKU@33213,KOG1190@1,KOG1190@2759
COG Functional cat.A
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000,ko03019,ko03041,ko03310
Exons2
Model size351
Cds size324
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70585.16847.1prot_M-pyrifera_M_contig70585.16847.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70585 62..427 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816598.8218377-CDS-M-pyrifera_M_contig70585:61..2881622816598.8218377-CDS-M-pyrifera_M_contig70585:61..288Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70585 62..288 -
1692278069.4410603-CDS-M-pyrifera_M_contig70585:61..2881692278069.4410603-CDS-M-pyrifera_M_contig70585:61..288Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70585 62..288 -
1622816598.8365803-CDS-M-pyrifera_M_contig70585:330..4271622816598.8365803-CDS-M-pyrifera_M_contig70585:330..427Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70585 331..427 -
1692278069.4547164-CDS-M-pyrifera_M_contig70585:330..4271692278069.4547164-CDS-M-pyrifera_M_contig70585:330..427Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70585 331..427 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816598.8521073-UTR-M-pyrifera_M_contig70585:427..4541622816598.8521073-UTR-M-pyrifera_M_contig70585:427..454Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70585 428..454 -
1692278069.4644241-UTR-M-pyrifera_M_contig70585:427..4541692278069.4644241-UTR-M-pyrifera_M_contig70585:427..454Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70585 428..454 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70585.16847.1

>prot_M-pyrifera_M_contig70585.16847.1 ID=prot_M-pyrifera_M_contig70585.16847.1|Name=mRNA_M-pyrifera_M_contig70585.16847.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
MRYLVNVSVLYDIFSRFGRPLRAVLFPGGSRSIGVLMTATGEPPSSLAAL
VEMDTAEAAATALKELDGRCIYESCNLLRLKYSNQSSLTVRYNNEKSADW
TKPDLGPG
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mRNA from alignment at M-pyrifera_M_contig70585:62..454-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70585.16847.1 ID=mRNA_M-pyrifera_M_contig70585.16847.1|Name=mRNA_M-pyrifera_M_contig70585.16847.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=393bp|location=Sequence derived from alignment at M-pyrifera_M_contig70585:62..454- (Macrocystis pyrifera P11B4 male)
CGTGTGCTCCATGTGACAATTACGGAAATGCGTTATTTAGTGAATGTATC
GGTGCTGTACGATATCTTTTCTCGCTTCGGGAGGCCGCTGCGCGCTGTAC
TTTTCCCCGGAGGCTCTCGTTCTAGTCGAGGCGGTGGCAGCAGCGGTGGA
CGTTCTAGCGGTGGAGTTGGGGTCTTAATGACTGCTACTGGGGAGCCCCC
ATCTTCGCTGGCTGCATTGGTGGAGATGGACACGGCGGAAGCTGCCGCTA
CGGCCCTGAAAGAGCTGGATGGAAGATGCATCTACGAGTCTTGCAACCTA
TTGCGCCTCAAGTATTCCAACCAGTCCTCTCTCACAGTGCGTTACAACAA
CGAAAAGTCGGCCGACTGGACAAAACCCGACTTGGGGCCCGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70585:62..454-

>mRNA_M-pyrifera_M_contig70585.16847.1 ID=mRNA_M-pyrifera_M_contig70585.16847.1|Name=mRNA_M-pyrifera_M_contig70585.16847.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig70585:62..454- (Macrocystis pyrifera P11B4 male)
ATGCGTTATTTAGTGAATGTATCGGTGCTGTACGATATCTTTTCTCGCTT
CGGGAGGCCGCTGCGCGCTGTACTTTTCCCCGGAGGCTCTCGTTCTAATG
CGTTATTTAGTGAATGTATCGGTGCTGTACGATATCTTTTCTCGCTTCGG
GAGGCCGCTGCGCGCTGTACTTTTCCCCGGAGGCTCTCGTTCTATTGGGG
TCTTAATGACTGCTACTGGGGAGCCCCCATCTTCGCTGGCTGCATTGGTG
GAGATGGACACGGCGGAAGCTGCCGCTACGGCCCTGAAAGAGCTGGATGG
AAGATGCATCTACGAGTCTTGCAACCTATTGCGCCTCAAGTATTCCAACC
AGTCCTCTCTCACAGTGCGTTACAACAACGAAAAGTCGGCCGACTGGACA
AAACCCGACTTGGGGCCCGGGTTGGGGTCTTAATGACTGCTACTGGGGAG
CCCCCATCTTCGCTGGCTGCATTGGTGGAGATGGACACGGCGGAAGCTGC
CGCTACGGCCCTGAAAGAGCTGGATGGAAGATGCATCTACGAGTCTTGCA
ACCTATTGCGCCTCAAGTATTCCAACCAGTCCTCTCTCACAGTGCGTTAC
AACAACGAAAAGTCGGCCGACTGGACAAAACCCGACTTGGGGCCCGGG
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