prot_M-pyrifera_M_contig70508.16834.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70508.16834.1
Unique Nameprot_M-pyrifera_M_contig70508.16834.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length133
Homology
BLAST of mRNA_M-pyrifera_M_contig70508.16834.1 vs. uniprot
Match: A0A7S0JTM7_CAFRO (Hypothetical protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JTM7_CAFRO)

HSP 1 Score: 94.0 bits (232), Expect = 1.020e-19
Identity = 51/137 (37.23%), Postives = 84/137 (61.31%), Query Frame = 0
Query:    1 MWW--ELTNADKYAPATDDGATGLTFNLISDQVAPDFITKSLGSTSILGVYTLIIVTLGGLFRSAFLLPVESIPFTNMDDCRDLLHLYALKLIEERSFDVVSA----HLRNEIHLFKLLVQLHKSNEVLVRITRRKD 131
            +WW  E+   DK+ PA + G  GL F  +SD++AP+ +T SLG  SI+ VYTL+++T+ GLFR   ++  + + +  ++DCR     Y ++L E   F         HL NE++L++ L+  ++S E+L RITR++D
Sbjct: 1504 LWWTAEIPADDKFGPAPEGG--GLEFITVSDRIAPNLLTSSLGG-SIIAVYTLLLITVAGLFRGTCVVKSQQVMYQELEDCR-----YLMELCEAIHFAEADTQYPRHLENEVYLYETLIGFYRSPEILARITRKRD 1632          
BLAST of mRNA_M-pyrifera_M_contig70508.16834.1 vs. uniprot
Match: A0A7S1C7R6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7R6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.270e-16
Identity = 48/135 (35.56%), Postives = 76/135 (56.30%), Query Frame = 0
Query:    1 MWWELTNADKYAPATDDGA-----TGLTFNLISDQVAPDFITKSLGSTSILGVYTLIIVTLGGLFRSAFLLPVESIPFTNMDDCRDLLHLYALKLIEERSFDVVSAHLRNEIHLFKLLVQLHKSNEVLVRITRRK 130
            +WWEL   D  AP    G       GL F ++SD++AP+F+T   GS  ILG+Y  +++ +G L RS    P E I F  +    DL+ L     I +    V   HL++E+ L+ +L++L++S E+L+RI++ K
Sbjct:   80 LWWELMMQDVPAPGGGGGGYAGSDIGLEFVVVSDRIAPNFLTSGFGSYGILGIYVGLVLAIGRLVRSGLGSPTERIMFEEIMAPDDLMELVEGIRIAQAGHYV--GHLKDEMRLYNILIKLYRSPEILLRISKEK 212          
BLAST of mRNA_M-pyrifera_M_contig70508.16834.1 vs. uniprot
Match: A0A5A8D3B8_CAFRO (Uncharacterized protein n=7 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D3B8_CAFRO)

HSP 1 Score: 81.3 bits (199), Expect = 2.940e-15
Identity = 43/117 (36.75%), Postives = 73/117 (62.39%), Query Frame = 0
Query:   19 ATGLTFNLISDQVAPDFITKSLGSTSILGVYTLIIVTLGGLFRSAFLLPVESIPFTNMDDCRDLLHLYALKLIEERSFDVVSA----HLRNEIHLFKLLVQLHKSNEVLVRITRRKD 131
            A G +F  +SD++AP+ +T SLG  SI+ VYTL+++T+ GLFR   ++  + + +  ++DCR     Y ++L E   F         HL NE++L++ L+  ++S E+L RITR++D
Sbjct: 4623 AAGSSFITVSDRIAPNLLTSSLGG-SIIAVYTLLLITVAGLFRGTCVVKSQQVMYQELEDCR-----YLMELCEAIHFAEADTQYPRHLENEVYLYETLIGFYRSPEILARITRKRD 4733          
BLAST of mRNA_M-pyrifera_M_contig70508.16834.1 vs. uniprot
Match: C1DZW1_MICCC (Piezo_RRas_bdg domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1DZW1_MICCC)

HSP 1 Score: 53.5 bits (127), Expect = 1.410e-5
Identity = 35/120 (29.17%), Postives = 65/120 (54.17%), Query Frame = 0
Query:   15 TDDGATGLTFNLISDQVAPDFITK-SLGSTSILGVYTLIIVTLGGLFRSAFLLPVESIPFTNMDDCRDLLHLY-ALKLIEERSFDVVSAHLRNEIHLFKLLVQLHKSNEVLVRITRRKDV 132
            T++G+ G+ +  +SD+     + +  L S S+L +Y  I V +GG+ R  F   +E +    + +   LL L   L+++    +       R+EI LF  L+Q+ +S ++L+++TR KDV
Sbjct: 3951 TEEGSQGVLYATMSDRFLSGVVEQLGLDSYSMLALYAFIFVAIGGVVRRFFQFKIEDVMIYEIPNPDYLLRLCRGLRMLRAHRYPGCR---RDEIKLFHTLIQMLRSPDILIKVTRNKDV 4067          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70508.16834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S0JTM7_CAFRO1.020e-1937.23Hypothetical protein n=2 Tax=Cafeteria roenbergens... [more]
A0A7S1C7R6_9STRA1.270e-1635.56Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A5A8D3B8_CAFRO2.940e-1536.75Uncharacterized protein n=7 Tax=Cafeteria roenberg... [more]
C1DZW1_MICCC1.410e-529.17Piezo_RRas_bdg domain-containing protein n=2 Tax=M... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031334Piezo non-specific cation channel, R-Ras-binding domainPFAMPF12166Piezo_RRas_bdgcoord: 2..128
e-value: 1.7E-17
score: 63.9
IPR027272Piezo familyPANTHERPTHR13167UNCHARACTERIZEDcoord: 2..130
NoneNo IPR availablePANTHERPTHR13167:SF25PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL COMPONENTcoord: 2..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..44
NoneNo IPR availableTMHMMTMhelixcoord: 43..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70508contigM-pyrifera_M_contig70508:357..863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70508.16834.1mRNA_M-pyrifera_M_contig70508.16834.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70508 354..863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70508.16834.1 ID=prot_M-pyrifera_M_contig70508.16834.1|Name=mRNA_M-pyrifera_M_contig70508.16834.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp
MWWELTNADKYAPATDDGATGLTFNLISDQVAPDFITKSLGSTSILGVYT
LIIVTLGGLFRSAFLLPVESIPFTNMDDCRDLLHLYALKLIEERSFDVVS
AHLRNEIHLFKLLVQLHKSNEVLVRITRRKDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031334Piezo_RRas-bd_dom
IPR027272Piezo