prot_M-pyrifera_M_contig70503.16829.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70503.16829.1
Unique Nameprot_M-pyrifera_M_contig70503.16829.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length43
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig70503.16829.1 vs. uniprot
Match: D8LTA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA1_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.070e-11
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:    1 AVSLIKTVVERGPWMEAMGEGLRRATAGDFTGSLLLYSRLAEV 43
            AVSL K VVERGPWM+ M   LRRATAGD+ G+L+LYSRLAEV
Sbjct:  251 AVSLFKNVVERGPWMDGMQAALRRATAGDYGGALVLYSRLAEV 293
[Close]
BLAST of mRNA_M-pyrifera_M_contig70503.16829.1 vs. uniprot
Match: A0A6H5JP59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP59_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.470e-11
Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:    1 AVSLIKTVVERGPWMEAMGEGLRRATAGDFTGSLLLYSRLAEV 43
            AVSL K VVERGPWM+ M   LRRATAGD+ G+L+LYSRLAE+
Sbjct:  428 AVSLFKNVVERGPWMDGMQAALRRATAGDYGGALVLYSRLAEI 470
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70503.16829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTA1_ECTSI1.070e-1174.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP59_9PHAE1.470e-1172.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70503contigM-pyrifera_M_contig70503:89..217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70503.16829.1mRNA_M-pyrifera_M_contig70503.16829.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70503 89..217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70503.16829.1 ID=prot_M-pyrifera_M_contig70503.16829.1|Name=mRNA_M-pyrifera_M_contig70503.16829.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=43bp
AVSLIKTVVERGPWMEAMGEGLRRATAGDFTGSLLLYSRLAEV
back to top