prot_M-pyrifera_M_contig70481.16823.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70481.16823.1
Unique Nameprot_M-pyrifera_M_contig70481.16823.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length169
Homology
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BLAST of mRNA_M-pyrifera_M_contig70481.16823.1 vs. uniprot
Match: A0A5A8E7D6_CAFRO (Uncharacterized protein n=6 Tax=Sar TaxID=2698737 RepID=A0A5A8E7D6_CAFRO)

HSP 1 Score: 136 bits (342), Expect = 3.100e-35
Identity = 73/136 (53.68%), Postives = 94/136 (69.12%), Query Frame = 0 
Query:    9 ETNYTCEVSKSTDGGKTWTQLYWNEGAFYPNGIAAWDPDHACFVAEADSGSAAGTHIWCTDD-GKTFNQTYTNPGAANSLMDIAIVPPASNGEAWAVGGALTS-SPSASFYHTTDFGKTWTAANTISGSYASAVDC 142
            ET +  ++S STD GKTW  ++ N+G FY NGIA  D ++ CFV EAD+G+AAG  I CT+D G  +N+T   PG  NSL+DI     A  GE WAVGG L+S   +A+FYH+T+ G +WT  +TISGSYASAVDC
Sbjct:  245 ETIFQAQISLSTDAGKTWNSVFENKGDFYANGIACIDDNNCCFVGEADAGAAAGARIHCTNDAGANWNRTLFLPGPQNSLLDITATGTA--GEYWAVGGTLSSLDANATFYHSTNSGNSWTLDSTISGSYASAVDC 378
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BLAST of mRNA_M-pyrifera_M_contig70481.16823.1 vs. uniprot
Match: A0A7S1C4R2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4R2_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.070e-12
Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 0 
Query:    6 GAGETNYTC---EVSKSTDGGKTWTQLYWNEGA--FYPNGIAAWDPDHACFVAEADSGSAAGTHIWCTDDGKTFNQTYTNPGAANSLM 88
            GAG+TNYT     ++KS DGGKTWT  +  +G   +Y NGI  +D  H   VAEADSG+ AG+ I+ T +GK + Q     GAA+S M
Sbjct:  222 GAGKTNYTQYTGAIAKSEDGGKTWTTQFKVQGVNEYYFNGIDCYDETHCVAVAEADSGTGAGSRIFQTTNGKDWKQVVFTAGAAHSPM 309
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BLAST of mRNA_M-pyrifera_M_contig70481.16823.1 vs. uniprot
Match: A0A7S3HBN6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBN6_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 9.700e-9
Identity = 44/118 (37.29%), Postives = 61/118 (51.69%), Query Frame = 0 
Query:   10 TNYTCEVSKSTDGGKTWTQLYWNEGAFYPNGIAAWDPDHACFVAEADSGSAAGTHIWCTDDGKTFNQTYTNPGAANSLMDIAIVPPASNGEAWAVGGALTS-SPSASFYHTTDFGKTW 126
            T Y   +SK+TDGG TWT+++  E   Y N I  +D +    VAE + G+ A   +  ++ G T+    T P  A SLM   ++   S  EAW  GG     S +  +YHTTD G TW
Sbjct:  226 TGYPGAISKTTDGGATWTKVFDTESNGYFNQIHCYDTETCVAVAENEEGAFA---VSTSNGGATWKNVLTAPAGA-SLMGARML---STTEAWVSGGGQDGRSLNGYYYHTTDGGNTW 336
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70481.16823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A5A8E7D6_CAFRO3.100e-3553.68Uncharacterized protein n=6 Tax=Sar TaxID=2698737 ... [more]
A0A7S1C4R2_9STRA1.070e-1247.73Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3HBN6_9STRA9.700e-937.29Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..152
e-value: 2.2E-11
score: 45.4
NoneNo IPR availableSUPERFAMILY110296Oligoxyloglucan reducing end-specific cellobiohydrolasecoord: 16..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70481contigM-pyrifera_M_contig70481:87..883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70481.16823.1mRNA_M-pyrifera_M_contig70481.16823.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70481 87..883 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70481.16823.1 ID=prot_M-pyrifera_M_contig70481.16823.1|Name=mRNA_M-pyrifera_M_contig70481.16823.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp
MAGVYGAGETNYTCEVSKSTDGGKTWTQLYWNEGAFYPNGIAAWDPDHAC
FVAEADSGSAAGTHIWCTDDGKTFNQTYTNPGAANSLMDIAIVPPASNGE
AWAVGGALTSSPSASFYHTTDFGKTWTAANTISGSYASAVDCVDAQHCWA
TTLQPLFQTASVAGLSTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf