prot_M-pyrifera_M_contig70480.16822.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70480.16822.1
Unique Nameprot_M-pyrifera_M_contig70480.16822.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length277
Homology
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A0G4IJE0_PLABS (RSN1_7TM domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJE0_PLABS)

HSP 1 Score: 89.4 bits (220), Expect = 2.390e-16
Identity = 88/289 (30.45%), Postives = 141/289 (48.79%), Query Frame = 0
Query:    6 PSAVLWHNLALQPSVVFGRRLLSFCITLLLLFISIAAVV-------GVASTNTTGTGEPLVKLGPARAGEK----CPG-------NVESRGAGAGSSTEITSGVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASV----FVGLSSRRVVNTAVLPILLNIPVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTF 272
            PS +L+HNL    S    RR ++   T++L+ +S+  V         +  + TT  G   V    A AG      C         N +S   G      ++  +T +  L I I+NV +  A+  + ++E H + + ++ +V    FVGL     VNT ++ +L+N     +++L L  ++S    Y D+TA+WY DVG+S+V+TMV N+  P   P +QI      R+      A    Q+ LNE Y GP F   DR A +L+TL ++++ S  +P L  +L  A TF
Sbjct:  350 PSNILFHNLKYSESSRCLRRWVTTVATVVLMMVSLVIVFLGSEQKQNLTRSTTTCLGV-TVSRDQALAGTDVDCYCASLSTAQLYNDKSICQGYVEGVAMSKLMTGMIALTIFIVNVFLRSAVVFLVKWEKHNTLSSQERAVTGKLFVGL----FVNTGIIIVLVN---GNLSALALGSIFSGA--YNDVTASWYRDVGISVVMTMVLNVLNPHLMPVLQIPVAACSRY---CSKAKMKTQKDLNELYSGPEFVLSDRYAGLLNTLFVSLLFSAGIPIL--LLTAAATF 623          
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A024G624_9STRA (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G624_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.650e-13
Identity = 57/194 (29.38%), Postives = 97/194 (50.00%), Query Frame = 0
Query:   97 LVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNI------PVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLS-----GNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPAL--VPILGIALTFLFWMD 277
            L++ I+N+++   L+ + + E + + +    S  + +   ++ NTA+L I++N       P   + S+ ++        YGD +A WY DVGVSL+LTM+ NI +P     +  +R  + R+W               QR L+  Y GP F    R A +L+T+ IT +LS  +P L  +   GI +T+  W D
Sbjct: 1054 LMVVIVNLLLTKILQFLVKMEKYHTESAHIISQVIKIFLAQLCNTALLVIIINANIQSFYPTKHMASINVSSFQFLSGKYGDFSAEWYQDVGVSLMLTMIINILSPHLNTFVTYLRLEIKRFWDRGCTFDYSRTKQDTQRDLDTLYRGPKFDLAQRYAQILTTIFITYLLSAGMPLLHVIGFCGIFITY--WAD 1245          
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A835Z625_9STRA (PHD-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z625_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.670e-13
Identity = 57/177 (32.20%), Postives = 90/177 (50.85%), Query Frame = 0
Query:   94 LQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNIPVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSI-QIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIA 269
            L   VI IIN+V+   ++ M   EGH + T    S    L+S    NT ++ +++N  +A    L       +  G  D   +WY   G SL++ M  N+ +P A   +  ++   L R + ++     + Q  +N+AY GP F    R+  VL+TL +T+VLSPALP L+P+  IA
Sbjct:  728 LASAVIIIINMVVKSVMKVMTATEGHDTITGATLSTTGKLASTLFANTFIVTMIVNAYIAADVPL-----LKNDAGSRDFDFSWYHTAGASLIVVMAVNVISPHATVIVGYLVIAPLKRLFAMTA----ITQSAMNKAYEGPQFDLSARLPFVLNTLAVTMVLSPALPLLLPLAMIA 895          
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A812REI9_9DINO (PanB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812REI9_9DINO)

HSP 1 Score: 68.6 bits (166), Expect = 2.400e-9
Identity = 50/194 (25.77%), Postives = 90/194 (46.39%), Query Frame = 0
Query:   90 GVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLN------IPVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTFLFWMD 277
            G+ F    ++ +INVV+ + L  +AEFE   S T  ++S+       + +NT  +   +N      +  A +   G+  L   R  + ++T  WY  VGV++V+ M+ N F P      +++ N   R +   G A    Q  L + Y  P F    + A +L+T+ +T++    LP L  +  + +   +W D
Sbjct:  435 GIAFASSTIVMVINVVLQLVLVYLAEFERPLSHTSLNSSMMKKAFWAQTLNTGFVLFFVNYFAPEALQTAVLIIPGVGNLLF-RGPFAEITRGWYAIVGVTIVMNMLLNCFVPSCVTVAKMVVNVFMRCFCRRGVAH---QAELLQLYTHPEFDIKQKYAQLLTTVFVTLMYGAGLPLLYFLAAVFMFCQYWAD 624          
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A2J8ACK2_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ACK2_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 3.860e-7
Identity = 48/190 (25.26%), Postives = 92/190 (48.42%), Query Frame = 0
Query:   79 AGAGSSTEITSGVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNI----PVATITSLGLAWL-WSSRTG-YGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPAL 262
            A A ++ +++ G+     LV+  +N  + +AL+ +     H + T R+ S  +      + NT  + +L+N      +A  +  G +W+ +  R G YGD +A WY +VG+S+++ M+ N   PL   +++ +     R+ +L     PV Q   + A+  P F    R AD+L    + ++    +P L
Sbjct:  511 AAAAAAQQMSWGIRLSISLVVAALNAAIKLALKGLVVLGRHWTHTARERSYALQCFFAMLCNTVAVLLLVNCNRLGELARQSDSG-SWIRYFVRYGSYGDFSALWYENVGLSIMILMIINTVGPLLTVAVEQLLQAFLRFRVLHCMCWPV-QADFDRAWARPRFTLEQRTADLLLNAALALLFGSGMPLL 698          
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A2D4CI16_PYTIN (PHM7_cyt domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CI16_PYTIN)

HSP 1 Score: 62.0 bits (149), Expect = 3.890e-7
Identity = 55/203 (27.09%), Postives = 92/203 (45.32%), Query Frame = 0
Query:   88 TSGVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNIPVATI----TSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLY--------RWWLLSGN-AGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTFLFWMD 277
            T  ++ L  L++  IN+++   L  +   E H + T +  S    +   +  NTA+L I++N  +        S+ L         Y D + +WY DVGVSL+LTM+ N F+P     + ++ NY++        R +    +      QR L   Y GP F    R A  L+T+ IT + S  +P L  +  + +   +W D
Sbjct:  792 TQVLSVLSVLMVVSINLLLARILNVLVIMEKHHTQTAQVVSRVTKVFLAQFFNTALLLIIINANLDYFFDSPESISLDSFPILNGKYSDFSPSWYMDVGVSLILTMIINTFSP----HVYVVFNYVFVEAQRFADRSFSFDYSLTRQDTQRDLEAFYRGPQFDLAYRYAQSLTTVFITYLFSAGMPLLHLVGFVQMIMTYWAD 990          
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A813FIL6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FIL6_POLGL)

HSP 1 Score: 60.8 bits (146), Expect = 9.090e-7
Identity = 50/196 (25.51%), Postives = 96/196 (48.98%), Query Frame = 0
Query:   87 ITSGVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNI----PVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTF-LFWMD 277
            +T G++    ++I +INVV+ + L  MAEFE   S T  ++S+   ++  + +NT  + +L+N      V  +T+         R  + D+   WY  VG +++  M+ N   P     ++ +  ++ R   ++ N    A+  L + Y  P F    + A +L+T+ +T+  S  LP L+ +  +A  F ++W D
Sbjct:  551 MTIGISTAASIIILVINVVLQICLLAMAEFERPLSITALNSSLMQKIAFAQTLNTGYVILLVNTWGTQGVRDVTAYIPLGQLLFRGPFEDIDRGWYAVVGAAILTNMLLNAVVPSCVSIVKGVVTWVKRR-CMTRNLKHHAE--LLDVYTNPEFDIKAKYAQLLTTVFVTLTYSSGLP-LLNLFAMAYMFCMYWAD 742          
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A8K1CTK3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTK3_PYTOL)

HSP 1 Score: 60.8 bits (146), Expect = 9.370e-7
Identity = 48/202 (23.76%), Postives = 88/202 (43.56%), Query Frame = 0
Query:   88 TSGVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNIPVATI---TSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIR---------NYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTFLFWMD 277
            T  ++ L   ++  IN+++   L  +   E H + + +  S  V +   +  NTA+L +++N  +       ++G          Y DL+  WY DVGVS++LTM+ N ++P        +R          + + + L   +     Q  L   Y GP F    R A  L+++ IT + S  +P L  +  + +   +W D
Sbjct:  786 TQALSGLSVFMVVCINILLARILNVLVTMEKHHTHSGQVVSHVVKVFLAQFCNTAILVVIINANLNYFFENKTIGFESFPILNGKYADLSPGWYNDVGVSIILTMIVNTYSPHIYVIFDYVRLEAKRLMDRGFSFNYSLTKQDT----QHDLEALYRGPKFDLASRYAQSLTSVFITYLFSAGMPILHLVGFMEMMMTYWAD 983          
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A812RBM5_9DINO (Hypothetical protein (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812RBM5_9DINO)

HSP 1 Score: 59.3 bits (142), Expect = 3.180e-6
Identity = 49/198 (24.75%), Postives = 82/198 (41.41%), Query Frame = 0
Query:   90 GVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVL--------PILLNIPVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLSGNA-----------------GPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPAL 262
            G+ F    ++ +INVV+ + L  +AEFE   S T  ++S+       + +NT  +        P +L   V  I  +G       R  + ++T  WY  VGV++++ M+ N F P      ++I N   R +   G A                        L E Y  P F    + A +L+T+ +T++    LP L
Sbjct:  468 GIAFASSTIVMVINVVLQLVLVYLAEFERPLSHTSLNSSMMKKAFWAQTLNTGFVLFFVNYFAPEVLQNAVLIIPGVGNLLF---RGPFAEITRGWYAIVGVTILMNMLLNCFVPAGVTVAKMIVNVFLRCFFRMGVAHQALRLVQRMCSDSFHPATTCHAELLELYTHPEFDIKQKYAQLLTTVFVTLMYGAGLPLL 662          
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A485KVH9_9STRA (Aste57867_11946 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVH9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.050e-6
Identity = 37/113 (32.74%), Postives = 58/113 (51.33%), Query Frame = 0
Query:  170 YGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQII----RNYLYRWWLLSGN-AGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTFLFWMD 277
            Y D T AWY DVGVSL+LTM+ N+ +P A   I  +      ++ R +    +      QR L   Y GP F    R + V++T+ IT++ S  +P ++ I   ++   +W D
Sbjct:  920 YSDFTVAWYNDVGVSLMLTMLINMVSPHAGIFITYVILETNRFIDRGFSFDFSITKQETQRDLEALYRGPEFDLATRYSVVINTIFITLLFSSGMPLMLLIGLFSMIVTYWTD 1032          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A0G4IJE0_PLABS2.390e-1630.45RSN1_7TM domain-containing protein n=1 Tax=Plasmod... [more]
A0A024G624_9STRA2.650e-1329.38tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Alb... [more]
A0A835Z625_9STRA3.670e-1332.20PHD-type domain-containing protein n=1 Tax=Tribone... [more]
A0A812REI9_9DINO2.400e-925.77PanB protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A2J8ACK2_9CHLO3.860e-725.26Uncharacterized protein n=1 Tax=Tetrabaena sociali... [more]
A0A2D4CI16_PYTIN3.890e-727.09PHM7_cyt domain-containing protein n=2 Tax=Pythium... [more]
A0A813FIL6_POLGL9.090e-725.51Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A8K1CTK3_PYTOL9.370e-723.76Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A812RBM5_9DINO3.180e-624.75Hypothetical protein (Fragment) n=2 Tax=Symbiodini... [more]
A0A485KVH9_9STRA4.050e-632.74Aste57867_11946 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13018PROBABLE MEMBRANE PROTEIN DUF221-RELATEDcoord: 4..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..244
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..175
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 276..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 245..275
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 253..275
NoneNo IPR availableTMHMMTMhelixcoord: 180..202
NoneNo IPR availableTMHMMTMhelixcoord: 25..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70480contigM-pyrifera_M_contig70480:186..1016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70480.16822.1mRNA_M-pyrifera_M_contig70480.16822.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70480 186..1016 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70480.16822.1 ID=prot_M-pyrifera_M_contig70480.16822.1|Name=mRNA_M-pyrifera_M_contig70480.16822.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=277bp
RAPPLPSAVLWHNLALQPSVVFGRRLLSFCITLLLLFISIAAVVGVASTN
TTGTGEPLVKLGPARAGEKCPGNVESRGAGAGSSTEITSGVTFLQPLVIT
IINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNI
PVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAP
SIQIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLC
ITIVLSPALPALVPILGIALTFLFWMD
back to top