mRNA_M-pyrifera_M_contig70480.16822.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A0G4IJE0_PLABS (RSN1_7TM domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJE0_PLABS) HSP 1 Score: 89.4 bits (220), Expect = 2.390e-16 Identity = 88/289 (30.45%), Postives = 141/289 (48.79%), Query Frame = 1 Query: 16 PSAVLWHNLALQPSVVFGRRLLSFCITLLLLFISIAAVV-------GVASTNTTGTGEPLVKLGPARAGEK----CPG-------NVESRGAGAGSSTEITSGVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASV----FVGLSSRRVVNTAVLPILLNIPVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTF 816 PS +L+HNL S RR ++ T++L+ +S+ V + + TT G V A AG C N +S G ++ +T + L I I+NV + A+ + ++E H + + ++ +V FVGL VNT ++ +L+N +++L L ++S Y D+TA+WY DVG+S+V+TMV N+ P P +QI R+ A Q+ LNE Y GP F DR A +L+TL ++++ S +P L +L A TF Sbjct: 350 PSNILFHNLKYSESSRCLRRWVTTVATVVLMMVSLVIVFLGSEQKQNLTRSTTTCLGV-TVSRDQALAGTDVDCYCASLSTAQLYNDKSICQGYVEGVAMSKLMTGMIALTIFIVNVFLRSAVVFLVKWEKHNTLSSQERAVTGKLFVGL----FVNTGIIIVLVN---GNLSALALGSIFSGA--YNDVTASWYRDVGISVVMTMVLNVLNPHLMPVLQIPVAACSRY---CSKAKMKTQKDLNELYSGPEFVLSDRYAGLLNTLFVSLLFSAGIPIL--LLTAAATF 623
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A024G624_9STRA (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G624_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.650e-13 Identity = 57/194 (29.38%), Postives = 97/194 (50.00%), Query Frame = 1 Query: 289 LVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNI------PVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLS-----GNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPAL--VPILGIALTFLFWMD 831 L++ I+N+++ L+ + + E + + + S + + ++ NTA+L I++N P + S+ ++ YGD +A WY DVGVSL+LTM+ NI +P + +R + R+W QR L+ Y GP F R A +L+T+ IT +LS +P L + GI +T+ W D Sbjct: 1054 LMVVIVNLLLTKILQFLVKMEKYHTESAHIISQVIKIFLAQLCNTALLVIIINANIQSFYPTKHMASINVSSFQFLSGKYGDFSAEWYQDVGVSLMLTMIINILSPHLNTFVTYLRLEIKRFWDRGCTFDYSRTKQDTQRDLDTLYRGPKFDLAQRYAQILTTIFITYLLSAGMPLLHVIGFCGIFITY--WAD 1245
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A835Z625_9STRA (PHD-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z625_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 3.670e-13 Identity = 57/177 (32.20%), Postives = 90/177 (50.85%), Query Frame = 1 Query: 280 LQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNIPVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSI-QIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIA 807 L VI IIN+V+ ++ M EGH + T S L+S NT ++ +++N +A L + G D +WY G SL++ M N+ +P A + ++ L R + ++ + Q +N+AY GP F R+ VL+TL +T+VLSPALP L+P+ IA Sbjct: 728 LASAVIIIINMVVKSVMKVMTATEGHDTITGATLSTTGKLASTLFANTFIVTMIVNAYIAADVPL-----LKNDAGSRDFDFSWYHTAGASLIVVMAVNVISPHATVIVGYLVIAPLKRLFAMTA----ITQSAMNKAYEGPQFDLSARLPFVLNTLAVTMVLSPALPLLLPLAMIA 895
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A812REI9_9DINO (PanB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812REI9_9DINO) HSP 1 Score: 68.6 bits (166), Expect = 2.400e-9 Identity = 50/194 (25.77%), Postives = 90/194 (46.39%), Query Frame = 1 Query: 268 GVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLN------IPVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTFLFWMD 831 G+ F ++ +INVV+ + L +AEFE S T ++S+ + +NT + +N + A + G+ L R + ++T WY VGV++V+ M+ N F P +++ N R + G A Q L + Y P F + A +L+T+ +T++ LP L + + + +W D Sbjct: 435 GIAFASSTIVMVINVVLQLVLVYLAEFERPLSHTSLNSSMMKKAFWAQTLNTGFVLFFVNYFAPEALQTAVLIIPGVGNLLF-RGPFAEITRGWYAIVGVTIVMNMLLNCFVPSCVTVAKMVVNVFMRCFCRRGVAH---QAELLQLYTHPEFDIKQKYAQLLTTVFVTLMYGAGLPLLYFLAAVFMFCQYWAD 624
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A2J8ACK2_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ACK2_9CHLO) HSP 1 Score: 62.0 bits (149), Expect = 3.860e-7 Identity = 48/190 (25.26%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 235 AGAGSSTEITSGVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNI----PVATITSLGLAWL-WSSRTG-YGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPAL 786 A A ++ +++ G+ LV+ +N + +AL+ + H + T R+ S + + NT + +L+N +A + G +W+ + R G YGD +A WY +VG+S+++ M+ N PL +++ + R+ +L PV Q + A+ P F R AD+L + ++ +P L Sbjct: 511 AAAAAAQQMSWGIRLSISLVVAALNAAIKLALKGLVVLGRHWTHTARERSYALQCFFAMLCNTVAVLLLVNCNRLGELARQSDSG-SWIRYFVRYGSYGDFSALWYENVGLSIMILMIINTVGPLLTVAVEQLLQAFLRFRVLHCMCWPV-QADFDRAWARPRFTLEQRTADLLLNAALALLFGSGMPLL 698
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A2D4CI16_PYTIN (PHM7_cyt domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CI16_PYTIN) HSP 1 Score: 62.0 bits (149), Expect = 3.890e-7 Identity = 55/203 (27.09%), Postives = 92/203 (45.32%), Query Frame = 1 Query: 262 TSGVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNIPVATI----TSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLY--------RWWLLSGN-AGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTFLFWMD 831 T ++ L L++ IN+++ L + E H + T + S + + NTA+L I++N + S+ L Y D + +WY DVGVSL+LTM+ N F+P + ++ NY++ R + + QR L Y GP F R A L+T+ IT + S +P L + + + +W D Sbjct: 792 TQVLSVLSVLMVVSINLLLARILNVLVIMEKHHTQTAQVVSRVTKVFLAQFFNTALLLIIINANLDYFFDSPESISLDSFPILNGKYSDFSPSWYMDVGVSLILTMIINTFSP----HVYVVFNYVFVEAQRFADRSFSFDYSLTRQDTQRDLEAFYRGPQFDLAYRYAQSLTTVFITYLFSAGMPLLHLVGFVQMIMTYWAD 990
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A813FIL6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FIL6_POLGL) HSP 1 Score: 60.8 bits (146), Expect = 9.090e-7 Identity = 50/196 (25.51%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 259 ITSGVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNI----PVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTF-LFWMD 831 +T G++ ++I +INVV+ + L MAEFE S T ++S+ ++ + +NT + +L+N V +T+ R + D+ WY VG +++ M+ N P ++ + ++ R ++ N A+ L + Y P F + A +L+T+ +T+ S LP L+ + +A F ++W D Sbjct: 551 MTIGISTAASIIILVINVVLQICLLAMAEFERPLSITALNSSLMQKIAFAQTLNTGYVILLVNTWGTQGVRDVTAYIPLGQLLFRGPFEDIDRGWYAVVGAAILTNMLLNAVVPSCVSIVKGVVTWVKRR-CMTRNLKHHAE--LLDVYTNPEFDIKAKYAQLLTTVFVTLTYSSGLP-LLNLFAMAYMFCMYWAD 742
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A8K1CTK3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTK3_PYTOL) HSP 1 Score: 60.8 bits (146), Expect = 9.370e-7 Identity = 48/202 (23.76%), Postives = 88/202 (43.56%), Query Frame = 1 Query: 262 TSGVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVLPILLNIPVATI---TSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIR---------NYLYRWWLLSGNAGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTFLFWMD 831 T ++ L ++ IN+++ L + E H + + + S V + + NTA+L +++N + ++G Y DL+ WY DVGVS++LTM+ N ++P +R + + + L + Q L Y GP F R A L+++ IT + S +P L + + + +W D Sbjct: 786 TQALSGLSVFMVVCINILLARILNVLVTMEKHHTHSGQVVSHVVKVFLAQFCNTAILVVIINANLNYFFENKTIGFESFPILNGKYADLSPGWYNDVGVSIILTMIVNTYSPHIYVIFDYVRLEAKRLMDRGFSFNYSLTKQDT----QHDLEALYRGPKFDLASRYAQSLTSVFITYLFSAGMPILHLVGFMEMMMTYWAD 983
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A812RBM5_9DINO (Hypothetical protein (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812RBM5_9DINO) HSP 1 Score: 59.3 bits (142), Expect = 3.180e-6 Identity = 49/198 (24.75%), Postives = 82/198 (41.41%), Query Frame = 1 Query: 268 GVTFLQPLVITIINVVMDVALRRMAEFEGHPSTTDRDASVFVGLSSRRVVNTAVL--------PILLNIPVATITSLGLAWLWSSRTGYGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQIIRNYLYRWWLLSGNA-----------------GPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPAL 786 G+ F ++ +INVV+ + L +AEFE S T ++S+ + +NT + P +L V I +G R + ++T WY VGV++++ M+ N F P ++I N R + G A L E Y P F + A +L+T+ +T++ LP L Sbjct: 468 GIAFASSTIVMVINVVLQLVLVYLAEFERPLSHTSLNSSMMKKAFWAQTLNTGFVLFFVNYFAPEVLQNAVLIIPGVGNLLF---RGPFAEITRGWYAIVGVTILMNMLLNCFVPAGVTVAKMIVNVFLRCFFRMGVAHQALRLVQRMCSDSFHPATTCHAELLELYTHPEFDIKQKYAQLLTTVFVTLMYGAGLPLL 662
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Match: A0A485KVH9_9STRA (Aste57867_11946 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVH9_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 4.050e-6 Identity = 37/113 (32.74%), Postives = 58/113 (51.33%), Query Frame = 1 Query: 508 YGDLTAAWYGDVGVSLVLTMVFNIFTPLAAPSIQII----RNYLYRWWLLSGN-AGPVAQRTLNEAYVGPPFRQPDRVADVLSTLCITIVLSPALPALVPILGIALTFLFWMD 831 Y D T AWY DVGVSL+LTM+ N+ +P A I + ++ R + + QR L Y GP F R + V++T+ IT++ S +P ++ I ++ +W D Sbjct: 920 YSDFTVAWYNDVGVSLMLTMLINMVSPHAGIFITYVILETNRFIDRGFSFDFSITKQETQRDLEALYRGPEFDLATRYSVVINTIFITLLFSSGMPLMLLIGLFSMIVTYWTD 1032 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70480.16822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70480.16822.1 >prot_M-pyrifera_M_contig70480.16822.1 ID=prot_M-pyrifera_M_contig70480.16822.1|Name=mRNA_M-pyrifera_M_contig70480.16822.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=277bp RAPPLPSAVLWHNLALQPSVVFGRRLLSFCITLLLLFISIAAVVGVASTNback to top mRNA from alignment at M-pyrifera_M_contig70480:186..1016+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70480.16822.1 ID=mRNA_M-pyrifera_M_contig70480.16822.1|Name=mRNA_M-pyrifera_M_contig70480.16822.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=831bp|location=Sequence derived from alignment at M-pyrifera_M_contig70480:186..1016+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70480:186..1016+ >mRNA_M-pyrifera_M_contig70480.16822.1 ID=mRNA_M-pyrifera_M_contig70480.16822.1|Name=mRNA_M-pyrifera_M_contig70480.16822.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1662bp|location=Sequence derived from alignment at M-pyrifera_M_contig70480:186..1016+ (Macrocystis pyrifera P11B4 male)back to top |