prot_M-pyrifera_M_contig70415.16814.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70415.16814.1
Unique Nameprot_M-pyrifera_M_contig70415.16814.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length305
Homology
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A1D1ZS47_AUXPR (Condensin-1 complex subunit CAP-D2 n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZS47_AUXPR)

HSP 1 Score: 142 bits (357), Expect = 4.590e-34
Identity = 95/278 (34.17%), Postives = 145/278 (52.16%), Query Frame = 0
Query:   23 LARAALMCVATFCAVSPSFGEENVRVVVTAAR-RAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGA--SNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEE 297
            L  +AL+C+    AV  +F   +++++ T  + R  +P  RS  AVALGDLA R PN++E WT+ MY  L+D                                       P++ ALA  FF E A++    ++P+Y   PD LS LS  S L  ADF+ +M+ LL  IK  + G+AL E++ QRFAA      ++   W  +AFCL  LP+++K  + L+E    Y   LGD+EVA AF S + KA+++ A K  +  +++E EA + + A  +AE+
Sbjct: 1015 LRASALLCLVKLMAVDGAFCSAHLQLLFTLLQNRGVEPGLRSTLAVALGDLALRFPNMLEGWTERMYRPLQDADTMVRKNALMVLSHLILNDMMKVKGHIAQLAVCLVDPEPRIRALAELFFHELAKKEVKGTSPIYNLLPDILSNLSADSRLGKADFQSIMQALLGYIKKDKQGDALVEKLCQRFAA-----SESLTQWHNVAFCLTQLPISDKGLRRLSESFKMYRRTLGDAEVAAAFASILAKAKRSAA-KGDVKALVEELEARMAQAAEERAEQ 1286          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A7S3BBX7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BBX7_9VIRI)

HSP 1 Score: 135 bits (339), Expect = 3.220e-32
Identity = 87/261 (33.33%), Postives = 130/261 (49.81%), Query Frame = 0
Query:   23 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARK-AVAGKPSLLQMIDE 282
            L  +A++C+A   A+  +F E ++  +    +   D   RS   VA+GDLA R PNVVEPWT  +YA LRD                                       P+V  LAR FF E A + +++PVY   PD +STLS    L+  +FRR+M++L+  +   RH E L++++  RFA            W+ LA+CL  L + EKA K + +    Y+ AL D EVA+ F +A+ KAR+ A + K S +  ++E
Sbjct:  191 LRTSAVLCLAKLMAIDGAFCEAHMGTLCATMQADPDAAVRSNCIVAMGDLAMRFPNVVEPWTARVYACLRDPTLGVRKNALLVLTHLILNDMLKVKGGIGDMAAKLEDESPRVVGLARLFFSELAAK-SNSPVYNLMPDIISTLSANDKLSDENFRRIMKFLVAFLDKDRHAEGLSDKLCARFA-----NAREPRVWRNLAYCLSQLALTEKAVKRMGDQFKSYAEALLDPEVAEHFRAALGKARRFASSDKKSNIDELEE 445          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A8J5ER49_ZINOF (Condensin-1 complex subunit CAP-D2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5ER49_ZINOF)

HSP 1 Score: 135 bits (341), Expect = 5.950e-32
Identity = 94/282 (33.33%), Postives = 138/282 (48.94%), Query Frame = 0
Query:   23 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 304
            L  +A++ +     V   F E N++++ T    A+    RS   VALGDLA R PN++EPWT+ MYA LRD                                        ++A+LA+ FF+E +++G SNP+Y   PD LS+LS  ++   A F  +M++L+  IK  +  EAL E++  RF+    G  D    WK +A+CL  L  +EK  K L E    Y HAL D  V D F S I+K +K   GK  +   IDE+E ++ +    + E+ A  R A
Sbjct:  905 LQASAMLALCRLMIVDSDFCESNLQLLFTVVESASTETVRSNCTVALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYIYEMTMRIEDEDERIASLAKLFFNELSKKG-SNPIYNLLPDILSSLSNQNISEDA-FNNIMQFLINSIKKDKQMEALVEKLCNRFS----GATDNR-QWKHIAYCLSQLTFSEKGLKKLIESFKAYEHALCDESVMDHFRSIINKCKKF--GKAEIKSYIDEFEEKLNKIHTYRKEQEATARNA 1177          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: UPI001C4ACAC2 (condensin complex subunit 1-like isoform X1 n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4ACAC2)

HSP 1 Score: 135 bits (341), Expect = 6.000e-32
Identity = 94/282 (33.33%), Postives = 138/282 (48.94%), Query Frame = 0
Query:   23 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 304
            L  +A++ +     V   F E N++++ T    A+    RS   VALGDLA R PN++EPWT+ MYA LRD                                        ++A+LA+ FF+E +++G SNP+Y   PD LS+LS  ++   A F  +M++L+  IK  +  EAL E++  RF+    G  D    WK +A+CL  L  +EK  K L E    Y HAL D  V D F S I+K +K   GK  +   IDE+E ++ +    + E+ A  R A
Sbjct:  944 LQASAMLALCRLMIVDSDFCESNLQLLFTVVESASTETVRSNCTVALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYIYEMTMRIEDEDERIASLAKLFFNELSKKG-SNPIYNLLPDILSSLSNQNISEDA-FNNIMQFLINSIKKDKQMEALVEKLCNRFS----GATDNR-QWKHIAYCLSQLTFSEKGLKKLIESFKAYEHALCDESVMDHFRSIINKCKKF--GKAEIKSYIDEFEEKLNKIHTYRKEQEATARNA 1216          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A8J5BZS3_ZINOF (Condensin-1 complex subunit CAP-D2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5BZS3_ZINOF)

HSP 1 Score: 135 bits (341), Expect = 6.020e-32
Identity = 94/282 (33.33%), Postives = 138/282 (48.94%), Query Frame = 0
Query:   23 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 304
            L  +A++ +     V   F E N++++ T    A+    RS   VALGDLA R PN++EPWT+ MYA LRD                                        ++A+LA+ FF+E +++G SNP+Y   PD LS+LS  ++   A F  +M++L+  IK  +  EAL E++  RF+    G  D    WK +A+CL  L  +EK  K L E    Y HAL D  V D F S I+K +K   GK  +   IDE+E ++ +    + E+ A  R A
Sbjct:  951 LQASAMLALCRLMIVDSDFCESNLQLLFTVVESASTETVRSNCTVALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYIYEMTMRIEDEDERIASLAKLFFNELSKKG-SNPIYNLLPDILSSLSNQNISEDA-FNNIMQFLINSIKKDKQMEALVEKLCNRFS----GATDNR-QWKHIAYCLSQLTFSEKGLKKLIESFKAYEHALCDESVMDHFRSIINKCKKF--GKAEIKSYIDEFEEKLNKIHTYRKEQEATARNA 1223          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A7R9TFL9_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TFL9_9VIRI)

HSP 1 Score: 128 bits (322), Expect = 1.760e-30
Identity = 89/280 (31.79%), Postives = 137/280 (48.93%), Query Frame = 0
Query:   23 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARK-AVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVD 301
            L  +A++C+A   A+   F E ++  +    + + +   RS   VA+GDLA R PNV+EPWT  +YA LRD                                       P+V  LAR FF E A + +++PVY   PD +S LS    L+   FRR+M++L+  +   RH E L++++  RFA            W+ LA+ L  L + EKA K +A+    Y+ AL D EVA+ F +A+ +AR+ A + K S ++ ++E      R A   A++A VD
Sbjct:   68 LRSSAMLCLAKMMAIDGDFCEAHMATLCNTMQNSKEESVRSNCIVAIGDLAMRFPNVLEPWTSRVYACLRDPTLAVRKNALLVLTHLILNDMMKVKGLISDMAERLEDESPRVVGLARLFFSELAAK-SNSPVYNLMPDMISRLSTNDQLSDDAFRRIMKFLVAFLDKDRHAEGLSDKLCSRFA-----NAREPRVWRNLAYVLSQLALTEKAVKRMADQFKNYAEALLDPEVAELFKAALGRARRFASSDKKSAVEELEE------RIASHIAQDAGVD 335          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: UPI00053C81F4 (condensin complex subunit 1 isoform X1 n=3 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C81F4)

HSP 1 Score: 131 bits (329), Expect = 2.320e-30
Identity = 89/282 (31.56%), Postives = 135/282 (47.87%), Query Frame = 0
Query:   23 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 304
            L  +A++ +  F  +  +F E N++++ T    A   V RS   V+LGDLA R PN++EPWT+ MY  LRD                                        ++++LA+ FF E +++G SNP+Y   PD L  LS    L    FR +M++L+  IK  +  EAL E++  RF     G  D +  W+ +++CL LL   EK  K L E    Y HAL +  V + F S I+K +K    KP L   IDE+E ++ +    + E+   +R A
Sbjct:  947 LQASAMLALCRFMIIDANFCESNLQLLFTVVENAPSEVVRSNCTVSLGDLAVRFPNLLEPWTENMYGRLRDASVSVRKNAVLVLSHLILNDMMKVKGYINEMAICIEDDDERISSLAKLFFHELSKKG-SNPIYNLLPDILGQLSNRD-LKRESFRNIMQFLIGSIKKDKQMEALVEKLCNRFC----GVTDTK-QWEYISYCLSLLTFTEKGIKKLIESFKTYGHALAEDSVMENFRSIINKGKKFA--KPELKACIDEFEEKLNKFHAEKKEQEETERNA 1219          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: F6SHV1_ORNAN (Condensin complex subunit 1 n=3 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=F6SHV1_ORNAN)

HSP 1 Score: 131 bits (329), Expect = 2.340e-30
Identity = 90/263 (34.22%), Postives = 130/263 (49.43%), Query Frame = 0
Query:   23 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSV-LAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWE 284
            L+ AA + +  FC +S SF +  +R++ T   ++  PV RS   VA+GDLA R PN+VEPWT  +YA LRD                                       P++AALA+ FF+E A +G  N VY   PD +S LS P   +    FR +MR LL  I   +  E+L E++ QRF      T   E  ++ LA CL LLP++E+  + + ++ D ++  L D  V  AF  A+ K R+    KP    +IDE+E
Sbjct: 1014 LSSAASLALGKFCMISASFCDSQLRLLFTLLEKSPLPVVRSNLMVAVGDLAIRFPNLVEPWTPHLYARLRDPAAAVRRTAGRVMTHLILKDLVKVKGQVSEMAVLLVDEDPEIAALAKNFFNELASKG--NAVYNLLPDIISRLSDPQGGVEEQPFRTIMRQLLSYITKDKQTESLVEKLCQRFR-----TARTERQYRDLAHCLALLPLSERGLRKMQDNFDCFADKLTDEAVFGAFSQAVGKLRRWA--KPEGKVLIDEFE 1267          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A7C9EDM8_OPUST (Cnd1 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9EDM8_OPUST)

HSP 1 Score: 127 bits (318), Expect = 3.740e-30
Identity = 87/262 (33.21%), Postives = 125/262 (47.71%), Query Frame = 0
Query:   23 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWE 284
            L   A++ +  F  V   F E N++++ T    AA    RS   +ALGDLA R PN++EPWT+ MYA LRD                                        +++ LA+ FF E +++G SNP+Y   PD LS LS  + L    F  +M++L+  IK  +  E L E++  RF+ V   T  ++  WK LA+CL  L   EK  K L E    Y HAL +  V D F + I+K +K    KP L   ++E+E
Sbjct:    1 LQATAMLALCRFMIVDADFCEANLQLLFTVVESAASETVRSNCTIALGDLAVRFPNLLEPWTENMYARLRDPSASVRKNAVLVLSHLILNDMMKVKGYINEMAVRLEDEDERISNLAKLFFTELSKKG-SNPIYNLLPDILSKLSAQN-LKSESFCSIMQFLIGSIKKDKQMEGLVEKLCNRFSGV---TDFSQ--WKCLAYCLSQLAFTEKGMKKLIESFKTYEHALCEDAVMDHFRNIINKGKKFA--KPDLKSSVEEFE 253          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A2V3IHV6_9FLOR (Condensin complex subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHV6_9FLOR)

HSP 1 Score: 130 bits (326), Expect = 5.700e-30
Identity = 79/267 (29.59%), Postives = 139/267 (52.06%), Query Frame = 0
Query:   23 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQR 289
            L  +A++C+A    V   F E N+R++ +    A +P+ RS A  ALGDLA R PN+VEPW+  +Y++LRD                                        ++A LAR FF+E AR+ ASN +Y   PD +S +S+   L+ + F+ V+ +L+ L+  ++HG+ + E++  RF      T +++   + LA+C+ +L ++E+  K L+E+   YS  LG+ +V +   +A+ K  K      + +Q I+E + +++R
Sbjct:  865 LQASAVLCLAKLMCVQEKFCEANLRLLFSILASATEPLVRSNAVTALGDLAFRFPNLVEPWSSHIYSSLRDSDEKVRKNTLMTLTHLILNDMIKVKGQIVGLAICILDDDERIAELARLFFNELARK-ASNAIYNILPDTISCMSKMDDLSKSGFKTVVSFLVGLMDKEKHGDGMVEKLCHRFR-----TSESDRETQELAYCISILNISERGLKKLSENFKSYSTKLGNDDVYEHISTAVSKCNKQGISS-TWIQTIEELQQKIER 1124          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1D1ZS47_AUXPR4.590e-3434.17Condensin-1 complex subunit CAP-D2 n=3 Tax=Auxenoc... [more]
A0A7S3BBX7_9VIRI3.220e-3233.33Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A8J5ER49_ZINOF5.950e-3233.33Condensin-1 complex subunit CAP-D2 n=1 Tax=Zingibe... [more]
UPI001C4ACAC26.000e-3233.33condensin complex subunit 1-like isoform X1 n=2 Ta... [more]
A0A8J5BZS3_ZINOF6.020e-3233.33Condensin-1 complex subunit CAP-D2 n=1 Tax=Zingibe... [more]
A0A7R9TFL9_9VIRI1.760e-3031.79Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
UPI00053C81F42.320e-3031.56condensin complex subunit 1 isoform X1 n=3 Tax=Tar... [more]
F6SHV1_ORNAN2.340e-3034.22Condensin complex subunit 1 n=3 Tax=Ornithorhynchu... [more]
A0A7C9EDM8_OPUST3.740e-3033.21Cnd1 domain-containing protein n=1 Tax=Opuntia str... [more]
A0A2V3IHV6_9FLOR5.700e-3029.59Condensin complex subunit 1 n=1 Tax=Gracilariopsis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032682Condensin complex subunit 1, C-terminalPFAMPF12717Cnd1coord: 62..209
e-value: 9.2E-31
score: 107.1
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 13..148
e-value: 4.4E-10
score: 41.2
IPR026971Condensin subunit 1/Condensin-2 complex subunit D3PANTHERPTHR14222CONDENSINcoord: 15..291
IPR007673Condensin subunit 1PANTHERPTHR14222:SF2CONDENSIN COMPLEX SUBUNIT 1coord: 15..291
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 38..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 26..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..305
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..25
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 17..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70415contigM-pyrifera_M_contig70415:73..987 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70415.16814.1mRNA_M-pyrifera_M_contig70415.16814.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70415 73..987 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70415.16814.1 ID=prot_M-pyrifera_M_contig70415.16814.1|Name=mRNA_M-pyrifera_M_contig70415.16814.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=305bp
SPSASATSSSTSSSSSSSSSSALARAALMCVATFCAVSPSFGEENVRVVV
TAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDPDPSVRA
DVLSVLGHLACNDLIKVRGGVGDLAACLADSHPKVAALARAFFDEFARRG
ASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAER
VAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHAL
GDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAV
DRRAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032682Cnd1_C
IPR011989ARM-like
IPR026971CND1/NCAPD3
IPR007673Condensin_cplx_su1
IPR016024ARM-type_fold