mRNA_M-pyrifera_M_contig70415.16814.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A1D1ZS47_AUXPR (Condensin-1 complex subunit CAP-D2 n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZS47_AUXPR) HSP 1 Score: 142 bits (357), Expect = 4.590e-34 Identity = 95/278 (34.17%), Postives = 145/278 (52.16%), Query Frame = 1 Query: 67 LARAALMCVATFCAVSPSFGEENVRVVVTAAR-RAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGA--SNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEE 891 L +AL+C+ AV +F +++++ T + R +P RS AVALGDLA R PN++E WT+ MY L+D P++ ALA FF E A++ ++P+Y PD LS LS S L ADF+ +M+ LL IK + G+AL E++ QRFAA ++ W +AFCL LP+++K + L+E Y LGD+EVA AF S + KA+++ A K + +++E EA + + A +AE+ Sbjct: 1015 LRASALLCLVKLMAVDGAFCSAHLQLLFTLLQNRGVEPGLRSTLAVALGDLALRFPNMLEGWTERMYRPLQDADTMVRKNALMVLSHLILNDMMKVKGHIAQLAVCLVDPEPRIRALAELFFHELAKKEVKGTSPIYNLLPDILSNLSADSRLGKADFQSIMQALLGYIKKDKQGDALVEKLCQRFAA-----SESLTQWHNVAFCLTQLPISDKGLRRLSESFKMYRRTLGDAEVAAAFASILAKAKRSAA-KGDVKALVEELEARMAQAAEERAEQ 1286
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A7S3BBX7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BBX7_9VIRI) HSP 1 Score: 135 bits (339), Expect = 3.220e-32 Identity = 87/261 (33.33%), Postives = 130/261 (49.81%), Query Frame = 1 Query: 67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARK-AVAGKPSLLQMIDE 846 L +A++C+A A+ +F E ++ + + D RS VA+GDLA R PNVVEPWT +YA LRD P+V LAR FF E A + +++PVY PD +STLS L+ +FRR+M++L+ + RH E L++++ RFA W+ LA+CL L + EKA K + + Y+ AL D EVA+ F +A+ KAR+ A + K S + ++E Sbjct: 191 LRTSAVLCLAKLMAIDGAFCEAHMGTLCATMQADPDAAVRSNCIVAMGDLAMRFPNVVEPWTARVYACLRDPTLGVRKNALLVLTHLILNDMLKVKGGIGDMAAKLEDESPRVVGLARLFFSELAAK-SNSPVYNLMPDIISTLSANDKLSDENFRRIMKFLVAFLDKDRHAEGLSDKLCARFA-----NAREPRVWRNLAYCLSQLALTEKAVKRMGDQFKSYAEALLDPEVAEHFRAALGKARRFASSDKKSNIDELEE 445
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A8J5ER49_ZINOF (Condensin-1 complex subunit CAP-D2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5ER49_ZINOF) HSP 1 Score: 135 bits (341), Expect = 5.950e-32 Identity = 94/282 (33.33%), Postives = 138/282 (48.94%), Query Frame = 1 Query: 67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 912 L +A++ + V F E N++++ T A+ RS VALGDLA R PN++EPWT+ MYA LRD ++A+LA+ FF+E +++G SNP+Y PD LS+LS ++ A F +M++L+ IK + EAL E++ RF+ G D WK +A+CL L +EK K L E Y HAL D V D F S I+K +K GK + IDE+E ++ + + E+ A R A Sbjct: 905 LQASAMLALCRLMIVDSDFCESNLQLLFTVVESASTETVRSNCTVALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYIYEMTMRIEDEDERIASLAKLFFNELSKKG-SNPIYNLLPDILSSLSNQNISEDA-FNNIMQFLINSIKKDKQMEALVEKLCNRFS----GATDNR-QWKHIAYCLSQLTFSEKGLKKLIESFKAYEHALCDESVMDHFRSIINKCKKF--GKAEIKSYIDEFEEKLNKIHTYRKEQEATARNA 1177
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: UPI001C4ACAC2 (condensin complex subunit 1-like isoform X1 n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4ACAC2) HSP 1 Score: 135 bits (341), Expect = 6.000e-32 Identity = 94/282 (33.33%), Postives = 138/282 (48.94%), Query Frame = 1 Query: 67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 912 L +A++ + V F E N++++ T A+ RS VALGDLA R PN++EPWT+ MYA LRD ++A+LA+ FF+E +++G SNP+Y PD LS+LS ++ A F +M++L+ IK + EAL E++ RF+ G D WK +A+CL L +EK K L E Y HAL D V D F S I+K +K GK + IDE+E ++ + + E+ A R A Sbjct: 944 LQASAMLALCRLMIVDSDFCESNLQLLFTVVESASTETVRSNCTVALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYIYEMTMRIEDEDERIASLAKLFFNELSKKG-SNPIYNLLPDILSSLSNQNISEDA-FNNIMQFLINSIKKDKQMEALVEKLCNRFS----GATDNR-QWKHIAYCLSQLTFSEKGLKKLIESFKAYEHALCDESVMDHFRSIINKCKKF--GKAEIKSYIDEFEEKLNKIHTYRKEQEATARNA 1216
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A8J5BZS3_ZINOF (Condensin-1 complex subunit CAP-D2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5BZS3_ZINOF) HSP 1 Score: 135 bits (341), Expect = 6.020e-32 Identity = 94/282 (33.33%), Postives = 138/282 (48.94%), Query Frame = 1 Query: 67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 912 L +A++ + V F E N++++ T A+ RS VALGDLA R PN++EPWT+ MYA LRD ++A+LA+ FF+E +++G SNP+Y PD LS+LS ++ A F +M++L+ IK + EAL E++ RF+ G D WK +A+CL L +EK K L E Y HAL D V D F S I+K +K GK + IDE+E ++ + + E+ A R A Sbjct: 951 LQASAMLALCRLMIVDSDFCESNLQLLFTVVESASTETVRSNCTVALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYIYEMTMRIEDEDERIASLAKLFFNELSKKG-SNPIYNLLPDILSSLSNQNISEDA-FNNIMQFLINSIKKDKQMEALVEKLCNRFS----GATDNR-QWKHIAYCLSQLTFSEKGLKKLIESFKAYEHALCDESVMDHFRSIINKCKKF--GKAEIKSYIDEFEEKLNKIHTYRKEQEATARNA 1223
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A7R9TFL9_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TFL9_9VIRI) HSP 1 Score: 128 bits (322), Expect = 1.760e-30 Identity = 89/280 (31.79%), Postives = 137/280 (48.93%), Query Frame = 1 Query: 67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARK-AVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVD 903 L +A++C+A A+ F E ++ + + + + RS VA+GDLA R PNV+EPWT +YA LRD P+V LAR FF E A + +++PVY PD +S LS L+ FRR+M++L+ + RH E L++++ RFA W+ LA+ L L + EKA K +A+ Y+ AL D EVA+ F +A+ +AR+ A + K S ++ ++E R A A++A VD Sbjct: 68 LRSSAMLCLAKMMAIDGDFCEAHMATLCNTMQNSKEESVRSNCIVAIGDLAMRFPNVLEPWTSRVYACLRDPTLAVRKNALLVLTHLILNDMMKVKGLISDMAERLEDESPRVVGLARLFFSELAAK-SNSPVYNLMPDMISRLSTNDQLSDDAFRRIMKFLVAFLDKDRHAEGLSDKLCSRFA-----NAREPRVWRNLAYVLSQLALTEKAVKRMADQFKNYAEALLDPEVAELFKAALGRARRFASSDKKSAVEELEE------RIASHIAQDAGVD 335
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: UPI00053C81F4 (condensin complex subunit 1 isoform X1 n=3 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C81F4) HSP 1 Score: 131 bits (329), Expect = 2.320e-30 Identity = 89/282 (31.56%), Postives = 135/282 (47.87%), Query Frame = 1 Query: 67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 912 L +A++ + F + +F E N++++ T A V RS V+LGDLA R PN++EPWT+ MY LRD ++++LA+ FF E +++G SNP+Y PD L LS L FR +M++L+ IK + EAL E++ RF G D + W+ +++CL LL EK K L E Y HAL + V + F S I+K +K KP L IDE+E ++ + + E+ +R A Sbjct: 947 LQASAMLALCRFMIIDANFCESNLQLLFTVVENAPSEVVRSNCTVSLGDLAVRFPNLLEPWTENMYGRLRDASVSVRKNAVLVLSHLILNDMMKVKGYINEMAICIEDDDERISSLAKLFFHELSKKG-SNPIYNLLPDILGQLSNRD-LKRESFRNIMQFLIGSIKKDKQMEALVEKLCNRFC----GVTDTK-QWEYISYCLSLLTFTEKGIKKLIESFKTYGHALAEDSVMENFRSIINKGKKFA--KPELKACIDEFEEKLNKFHAEKKEQEETERNA 1219
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: F6SHV1_ORNAN (Condensin complex subunit 1 n=3 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=F6SHV1_ORNAN) HSP 1 Score: 131 bits (329), Expect = 2.340e-30 Identity = 90/263 (34.22%), Postives = 130/263 (49.43%), Query Frame = 1 Query: 67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSV-LAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWE 852 L+ AA + + FC +S SF + +R++ T ++ PV RS VA+GDLA R PN+VEPWT +YA LRD P++AALA+ FF+E A +G N VY PD +S LS P + FR +MR LL I + E+L E++ QRF T E ++ LA CL LLP++E+ + + ++ D ++ L D V AF A+ K R+ KP +IDE+E Sbjct: 1014 LSSAASLALGKFCMISASFCDSQLRLLFTLLEKSPLPVVRSNLMVAVGDLAIRFPNLVEPWTPHLYARLRDPAAAVRRTAGRVMTHLILKDLVKVKGQVSEMAVLLVDEDPEIAALAKNFFNELASKG--NAVYNLLPDIISRLSDPQGGVEEQPFRTIMRQLLSYITKDKQTESLVEKLCQRFR-----TARTERQYRDLAHCLALLPLSERGLRKMQDNFDCFADKLTDEAVFGAFSQAVGKLRRWA--KPEGKVLIDEFE 1267
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A7C9EDM8_OPUST (Cnd1 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9EDM8_OPUST) HSP 1 Score: 127 bits (318), Expect = 3.740e-30 Identity = 87/262 (33.21%), Postives = 125/262 (47.71%), Query Frame = 1 Query: 67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWE 852 L A++ + F V F E N++++ T AA RS +ALGDLA R PN++EPWT+ MYA LRD +++ LA+ FF E +++G SNP+Y PD LS LS + L F +M++L+ IK + E L E++ RF+ V T ++ WK LA+CL L EK K L E Y HAL + V D F + I+K +K KP L ++E+E Sbjct: 1 LQATAMLALCRFMIVDADFCEANLQLLFTVVESAASETVRSNCTIALGDLAVRFPNLLEPWTENMYARLRDPSASVRKNAVLVLSHLILNDMMKVKGYINEMAVRLEDEDERISNLAKLFFTELSKKG-SNPIYNLLPDILSKLSAQN-LKSESFCSIMQFLIGSIKKDKQMEGLVEKLCNRFSGV---TDFSQ--WKCLAYCLSQLAFTEKGMKKLIESFKTYEHALCEDAVMDHFRNIINKGKKFA--KPDLKSSVEEFE 253
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A2V3IHV6_9FLOR (Condensin complex subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHV6_9FLOR) HSP 1 Score: 130 bits (326), Expect = 5.700e-30 Identity = 79/267 (29.59%), Postives = 139/267 (52.06%), Query Frame = 1 Query: 67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQR 867 L +A++C+A V F E N+R++ + A +P+ RS A ALGDLA R PN+VEPW+ +Y++LRD ++A LAR FF+E AR+ ASN +Y PD +S +S+ L+ + F+ V+ +L+ L+ ++HG+ + E++ RF T +++ + LA+C+ +L ++E+ K L+E+ YS LG+ +V + +A+ K K + +Q I+E + +++R Sbjct: 865 LQASAVLCLAKLMCVQEKFCEANLRLLFSILASATEPLVRSNAVTALGDLAFRFPNLVEPWSSHIYSSLRDSDEKVRKNTLMTLTHLILNDMIKVKGQIVGLAICILDDDERIAELARLFFNELARK-ASNAIYNILPDTISCMSKMDDLSKSGFKTVVSFLVGLMDKEKHGDGMVEKLCHRFR-----TSESDRETQELAYCISILNISERGLKKLSENFKSYSTKLGNDDVYEHISTAVSKCNKQGISS-TWIQTIEELQQKIER 1124 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70415.16814.1 >prot_M-pyrifera_M_contig70415.16814.1 ID=prot_M-pyrifera_M_contig70415.16814.1|Name=mRNA_M-pyrifera_M_contig70415.16814.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=305bp SPSASATSSSTSSSSSSSSSSALARAALMCVATFCAVSPSFGEENVRVVVback to top mRNA from alignment at M-pyrifera_M_contig70415:73..987- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70415.16814.1 ID=mRNA_M-pyrifera_M_contig70415.16814.1|Name=mRNA_M-pyrifera_M_contig70415.16814.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=915bp|location=Sequence derived from alignment at M-pyrifera_M_contig70415:73..987- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70415:73..987- >mRNA_M-pyrifera_M_contig70415.16814.1 ID=mRNA_M-pyrifera_M_contig70415.16814.1|Name=mRNA_M-pyrifera_M_contig70415.16814.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1830bp|location=Sequence derived from alignment at M-pyrifera_M_contig70415:73..987- (Macrocystis pyrifera P11B4 male)back to top |