mRNA_M-pyrifera_M_contig70415.16814.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70415.16814.1
Unique NamemRNA_M-pyrifera_M_contig70415.16814.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A1D1ZS47_AUXPR (Condensin-1 complex subunit CAP-D2 n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZS47_AUXPR)

HSP 1 Score: 142 bits (357), Expect = 4.590e-34
Identity = 95/278 (34.17%), Postives = 145/278 (52.16%), Query Frame = 1
Query:   67 LARAALMCVATFCAVSPSFGEENVRVVVTAAR-RAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGA--SNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEE 891
            L  +AL+C+    AV  +F   +++++ T  + R  +P  RS  AVALGDLA R PN++E WT+ MY  L+D                                       P++ ALA  FF E A++    ++P+Y   PD LS LS  S L  ADF+ +M+ LL  IK  + G+AL E++ QRFAA      ++   W  +AFCL  LP+++K  + L+E    Y   LGD+EVA AF S + KA+++ A K  +  +++E EA + + A  +AE+
Sbjct: 1015 LRASALLCLVKLMAVDGAFCSAHLQLLFTLLQNRGVEPGLRSTLAVALGDLALRFPNMLEGWTERMYRPLQDADTMVRKNALMVLSHLILNDMMKVKGHIAQLAVCLVDPEPRIRALAELFFHELAKKEVKGTSPIYNLLPDILSNLSADSRLGKADFQSIMQALLGYIKKDKQGDALVEKLCQRFAA-----SESLTQWHNVAFCLTQLPISDKGLRRLSESFKMYRRTLGDAEVAAAFASILAKAKRSAA-KGDVKALVEELEARMAQAAEERAEQ 1286          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A7S3BBX7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BBX7_9VIRI)

HSP 1 Score: 135 bits (339), Expect = 3.220e-32
Identity = 87/261 (33.33%), Postives = 130/261 (49.81%), Query Frame = 1
Query:   67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARK-AVAGKPSLLQMIDE 846
            L  +A++C+A   A+  +F E ++  +    +   D   RS   VA+GDLA R PNVVEPWT  +YA LRD                                       P+V  LAR FF E A + +++PVY   PD +STLS    L+  +FRR+M++L+  +   RH E L++++  RFA            W+ LA+CL  L + EKA K + +    Y+ AL D EVA+ F +A+ KAR+ A + K S +  ++E
Sbjct:  191 LRTSAVLCLAKLMAIDGAFCEAHMGTLCATMQADPDAAVRSNCIVAMGDLAMRFPNVVEPWTARVYACLRDPTLGVRKNALLVLTHLILNDMLKVKGGIGDMAAKLEDESPRVVGLARLFFSELAAK-SNSPVYNLMPDIISTLSANDKLSDENFRRIMKFLVAFLDKDRHAEGLSDKLCARFA-----NAREPRVWRNLAYCLSQLALTEKAVKRMGDQFKSYAEALLDPEVAEHFRAALGKARRFASSDKKSNIDELEE 445          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A8J5ER49_ZINOF (Condensin-1 complex subunit CAP-D2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5ER49_ZINOF)

HSP 1 Score: 135 bits (341), Expect = 5.950e-32
Identity = 94/282 (33.33%), Postives = 138/282 (48.94%), Query Frame = 1
Query:   67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 912
            L  +A++ +     V   F E N++++ T    A+    RS   VALGDLA R PN++EPWT+ MYA LRD                                        ++A+LA+ FF+E +++G SNP+Y   PD LS+LS  ++   A F  +M++L+  IK  +  EAL E++  RF+    G  D    WK +A+CL  L  +EK  K L E    Y HAL D  V D F S I+K +K   GK  +   IDE+E ++ +    + E+ A  R A
Sbjct:  905 LQASAMLALCRLMIVDSDFCESNLQLLFTVVESASTETVRSNCTVALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYIYEMTMRIEDEDERIASLAKLFFNELSKKG-SNPIYNLLPDILSSLSNQNISEDA-FNNIMQFLINSIKKDKQMEALVEKLCNRFS----GATDNR-QWKHIAYCLSQLTFSEKGLKKLIESFKAYEHALCDESVMDHFRSIINKCKKF--GKAEIKSYIDEFEEKLNKIHTYRKEQEATARNA 1177          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: UPI001C4ACAC2 (condensin complex subunit 1-like isoform X1 n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4ACAC2)

HSP 1 Score: 135 bits (341), Expect = 6.000e-32
Identity = 94/282 (33.33%), Postives = 138/282 (48.94%), Query Frame = 1
Query:   67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 912
            L  +A++ +     V   F E N++++ T    A+    RS   VALGDLA R PN++EPWT+ MYA LRD                                        ++A+LA+ FF+E +++G SNP+Y   PD LS+LS  ++   A F  +M++L+  IK  +  EAL E++  RF+    G  D    WK +A+CL  L  +EK  K L E    Y HAL D  V D F S I+K +K   GK  +   IDE+E ++ +    + E+ A  R A
Sbjct:  944 LQASAMLALCRLMIVDSDFCESNLQLLFTVVESASTETVRSNCTVALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYIYEMTMRIEDEDERIASLAKLFFNELSKKG-SNPIYNLLPDILSSLSNQNISEDA-FNNIMQFLINSIKKDKQMEALVEKLCNRFS----GATDNR-QWKHIAYCLSQLTFSEKGLKKLIESFKAYEHALCDESVMDHFRSIINKCKKF--GKAEIKSYIDEFEEKLNKIHTYRKEQEATARNA 1216          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A8J5BZS3_ZINOF (Condensin-1 complex subunit CAP-D2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5BZS3_ZINOF)

HSP 1 Score: 135 bits (341), Expect = 6.020e-32
Identity = 94/282 (33.33%), Postives = 138/282 (48.94%), Query Frame = 1
Query:   67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 912
            L  +A++ +     V   F E N++++ T    A+    RS   VALGDLA R PN++EPWT+ MYA LRD                                        ++A+LA+ FF+E +++G SNP+Y   PD LS+LS  ++   A F  +M++L+  IK  +  EAL E++  RF+    G  D    WK +A+CL  L  +EK  K L E    Y HAL D  V D F S I+K +K   GK  +   IDE+E ++ +    + E+ A  R A
Sbjct:  951 LQASAMLALCRLMIVDSDFCESNLQLLFTVVESASTETVRSNCTVALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYIYEMTMRIEDEDERIASLAKLFFNELSKKG-SNPIYNLLPDILSSLSNQNISEDA-FNNIMQFLINSIKKDKQMEALVEKLCNRFS----GATDNR-QWKHIAYCLSQLTFSEKGLKKLIESFKAYEHALCDESVMDHFRSIINKCKKF--GKAEIKSYIDEFEEKLNKIHTYRKEQEATARNA 1223          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A7R9TFL9_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TFL9_9VIRI)

HSP 1 Score: 128 bits (322), Expect = 1.760e-30
Identity = 89/280 (31.79%), Postives = 137/280 (48.93%), Query Frame = 1
Query:   67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARK-AVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVD 903
            L  +A++C+A   A+   F E ++  +    + + +   RS   VA+GDLA R PNV+EPWT  +YA LRD                                       P+V  LAR FF E A + +++PVY   PD +S LS    L+   FRR+M++L+  +   RH E L++++  RFA            W+ LA+ L  L + EKA K +A+    Y+ AL D EVA+ F +A+ +AR+ A + K S ++ ++E      R A   A++A VD
Sbjct:   68 LRSSAMLCLAKMMAIDGDFCEAHMATLCNTMQNSKEESVRSNCIVAIGDLAMRFPNVLEPWTSRVYACLRDPTLAVRKNALLVLTHLILNDMMKVKGLISDMAERLEDESPRVVGLARLFFSELAAK-SNSPVYNLMPDMISRLSTNDQLSDDAFRRIMKFLVAFLDKDRHAEGLSDKLCSRFA-----NAREPRVWRNLAYVLSQLALTEKAVKRMADQFKNYAEALLDPEVAELFKAALGRARRFASSDKKSAVEELEE------RIASHIAQDAGVD 335          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: UPI00053C81F4 (condensin complex subunit 1 isoform X1 n=3 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C81F4)

HSP 1 Score: 131 bits (329), Expect = 2.320e-30
Identity = 89/282 (31.56%), Postives = 135/282 (47.87%), Query Frame = 1
Query:   67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAVDRRA 912
            L  +A++ +  F  +  +F E N++++ T    A   V RS   V+LGDLA R PN++EPWT+ MY  LRD                                        ++++LA+ FF E +++G SNP+Y   PD L  LS    L    FR +M++L+  IK  +  EAL E++  RF     G  D +  W+ +++CL LL   EK  K L E    Y HAL +  V + F S I+K +K    KP L   IDE+E ++ +    + E+   +R A
Sbjct:  947 LQASAMLALCRFMIIDANFCESNLQLLFTVVENAPSEVVRSNCTVSLGDLAVRFPNLLEPWTENMYGRLRDASVSVRKNAVLVLSHLILNDMMKVKGYINEMAICIEDDDERISSLAKLFFHELSKKG-SNPIYNLLPDILGQLSNRD-LKRESFRNIMQFLIGSIKKDKQMEALVEKLCNRFC----GVTDTK-QWEYISYCLSLLTFTEKGIKKLIESFKTYGHALAEDSVMENFRSIINKGKKFA--KPELKACIDEFEEKLNKFHAEKKEQEETERNA 1219          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: F6SHV1_ORNAN (Condensin complex subunit 1 n=3 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=F6SHV1_ORNAN)

HSP 1 Score: 131 bits (329), Expect = 2.340e-30
Identity = 90/263 (34.22%), Postives = 130/263 (49.43%), Query Frame = 1
Query:   67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSV-LAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWE 852
            L+ AA + +  FC +S SF +  +R++ T   ++  PV RS   VA+GDLA R PN+VEPWT  +YA LRD                                       P++AALA+ FF+E A +G  N VY   PD +S LS P   +    FR +MR LL  I   +  E+L E++ QRF      T   E  ++ LA CL LLP++E+  + + ++ D ++  L D  V  AF  A+ K R+    KP    +IDE+E
Sbjct: 1014 LSSAASLALGKFCMISASFCDSQLRLLFTLLEKSPLPVVRSNLMVAVGDLAIRFPNLVEPWTPHLYARLRDPAAAVRRTAGRVMTHLILKDLVKVKGQVSEMAVLLVDEDPEIAALAKNFFNELASKG--NAVYNLLPDIISRLSDPQGGVEEQPFRTIMRQLLSYITKDKQTESLVEKLCQRFR-----TARTERQYRDLAHCLALLPLSERGLRKMQDNFDCFADKLTDEAVFGAFSQAVGKLRRWA--KPEGKVLIDEFE 1267          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A7C9EDM8_OPUST (Cnd1 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9EDM8_OPUST)

HSP 1 Score: 127 bits (318), Expect = 3.740e-30
Identity = 87/262 (33.21%), Postives = 125/262 (47.71%), Query Frame = 1
Query:   67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWE 852
            L   A++ +  F  V   F E N++++ T    AA    RS   +ALGDLA R PN++EPWT+ MYA LRD                                        +++ LA+ FF E +++G SNP+Y   PD LS LS  + L    F  +M++L+  IK  +  E L E++  RF+ V   T  ++  WK LA+CL  L   EK  K L E    Y HAL +  V D F + I+K +K    KP L   ++E+E
Sbjct:    1 LQATAMLALCRFMIVDADFCEANLQLLFTVVESAASETVRSNCTIALGDLAVRFPNLLEPWTENMYARLRDPSASVRKNAVLVLSHLILNDMMKVKGYINEMAVRLEDEDERISNLAKLFFTELSKKG-SNPIYNLLPDILSKLSAQN-LKSESFCSIMQFLIGSIKKDKQMEGLVEKLCNRFSGV---TDFSQ--WKCLAYCLSQLAFTEKGMKKLIESFKTYEHALCEDAVMDHFRNIINKGKKFA--KPDLKSSVEEFE 253          
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Match: A0A2V3IHV6_9FLOR (Condensin complex subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHV6_9FLOR)

HSP 1 Score: 130 bits (326), Expect = 5.700e-30
Identity = 79/267 (29.59%), Postives = 139/267 (52.06%), Query Frame = 1
Query:   67 LARAALMCVATFCAVSPSFGEENVRVVVTAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVAALARAFFDEFARRGASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAERVAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHALGDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQR 867
            L  +A++C+A    V   F E N+R++ +    A +P+ RS A  ALGDLA R PN+VEPW+  +Y++LRD                                        ++A LAR FF+E AR+ ASN +Y   PD +S +S+   L+ + F+ V+ +L+ L+  ++HG+ + E++  RF      T +++   + LA+C+ +L ++E+  K L+E+   YS  LG+ +V +   +A+ K  K      + +Q I+E + +++R
Sbjct:  865 LQASAVLCLAKLMCVQEKFCEANLRLLFSILASATEPLVRSNAVTALGDLAFRFPNLVEPWSSHIYSSLRDSDEKVRKNTLMTLTHLILNDMIKVKGQIVGLAICILDDDERIAELARLFFNELARK-ASNAIYNILPDTISCMSKMDDLSKSGFKTVVSFLVGLMDKEKHGDGMVEKLCHRFR-----TSESDRETQELAYCISILNISERGLKKLSENFKSYSTKLGNDDVYEHISTAVSKCNKQGISS-TWIQTIEELQQKIER 1124          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70415.16814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1D1ZS47_AUXPR4.590e-3434.17Condensin-1 complex subunit CAP-D2 n=3 Tax=Auxenoc... [more]
A0A7S3BBX7_9VIRI3.220e-3233.33Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A8J5ER49_ZINOF5.950e-3233.33Condensin-1 complex subunit CAP-D2 n=1 Tax=Zingibe... [more]
UPI001C4ACAC26.000e-3233.33condensin complex subunit 1-like isoform X1 n=2 Ta... [more]
A0A8J5BZS3_ZINOF6.020e-3233.33Condensin-1 complex subunit CAP-D2 n=1 Tax=Zingibe... [more]
A0A7R9TFL9_9VIRI1.760e-3031.79Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
UPI00053C81F42.320e-3031.56condensin complex subunit 1 isoform X1 n=3 Tax=Tar... [more]
F6SHV1_ORNAN2.340e-3034.22Condensin complex subunit 1 n=3 Tax=Ornithorhynchu... [more]
A0A7C9EDM8_OPUST3.740e-3033.21Cnd1 domain-containing protein n=1 Tax=Opuntia str... [more]
A0A2V3IHV6_9FLOR5.700e-3029.59Condensin complex subunit 1 n=1 Tax=Gracilariopsis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70415contigM-pyrifera_M_contig70415:73..987 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score140.6
Seed ortholog evalue1.2e-30
Seed eggNOG ortholog3075.A0A087SA27
KEGG koko:K06677
KEGG Pathwayko04111,map04111
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases
EggNOG OGs34H82@3041,37PDB@33090,COG5098@1,KOG0414@2759
COG Functional cat.BD
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Exons1
Model size915
Cds size915
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816596.9537635-CDS-M-pyrifera_M_contig70415:72..9871622816596.9537635-CDS-M-pyrifera_M_contig70415:72..987Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70415 73..987 -
1692278068.2968602-CDS-M-pyrifera_M_contig70415:72..9871692278068.2968602-CDS-M-pyrifera_M_contig70415:72..987Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70415 73..987 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70415.16814.1prot_M-pyrifera_M_contig70415.16814.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70415 73..987 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70415.16814.1

>prot_M-pyrifera_M_contig70415.16814.1 ID=prot_M-pyrifera_M_contig70415.16814.1|Name=mRNA_M-pyrifera_M_contig70415.16814.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=305bp
SPSASATSSSTSSSSSSSSSSALARAALMCVATFCAVSPSFGEENVRVVV
TAARRAADPVTRSAAAVALGDLASRHPNVVEPWTKEMYAALRDPDPSVRA
DVLSVLGHLACNDLIKVRGGVGDLAACLADSHPKVAALARAFFDEFARRG
ASNPVYAFFPDALSTLSRPSVLAPADFRRVMRYLLQLIKSQRHGEALAER
VAQRFAAVPLGTPDAEITWKALAFCLGLLPVAEKAAKSLAEHMDWYSHAL
GDSEVADAFISAIDKARKAVAGKPSLLQMIDEWEAEVQRKAGIQAEEAAV
DRRAK
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mRNA from alignment at M-pyrifera_M_contig70415:73..987-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70415.16814.1 ID=mRNA_M-pyrifera_M_contig70415.16814.1|Name=mRNA_M-pyrifera_M_contig70415.16814.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=915bp|location=Sequence derived from alignment at M-pyrifera_M_contig70415:73..987- (Macrocystis pyrifera P11B4 male)
TCACCTTCTGCATCAGCAACATCCTCTTCCACTTCATCATCATCATCATC ATCATCATCTTCTGCATTGGCACGTGCTGCATTGATGTGTGTTGCGACTT TTTGTGCAGTGTCTCCTTCATTTGGTGAGGAAAATGTGCGTGTCGTTGTA ACTGCTGCACGACGTGCTGCTGATCCCGTGACACGAAGTGCAGCTGCAGT TGCACTGGGTGATCTTGCTTCTCGGCATCCAAATGTGGTGGAACCTTGGA CGAAAGAGATGTATGCTGCGCTACGGGATCCAGATCCAAGCGTACGTGCT GATGTATTGAGCGTATTGGGCCACTTGGCTTGTAACGACTTGATCAAGGT ACGTGGTGGTGTTGGAGACTTGGCAGCATGTTTAGCAGATAGTCATCCCA AAGTTGCTGCTCTCGCACGAGCATTCTTTGATGAATTTGCAAGGCGTGGG GCCAGCAATCCAGTCTATGCATTCTTCCCAGATGCACTTTCCACACTGTC ACGACCATCTGTCCTTGCACCTGCTGATTTCCGTCGTGTGATGCGATATC TCTTGCAACTGATAAAGTCGCAACGGCATGGGGAAGCACTGGCAGAGCGA GTTGCTCAACGTTTTGCAGCAGTTCCATTGGGGACTCCAGATGCAGAAAT TACATGGAAAGCGTTGGCATTTTGCCTTGGCTTGTTACCTGTTGCTGAAA AAGCAGCAAAGTCCCTTGCTGAACATATGGATTGGTACTCCCACGCACTT GGGGATAGTGAAGTGGCAGATGCATTCATTTCTGCCATTGACAAAGCAAG AAAGGCAGTTGCTGGAAAGCCATCATTGTTGCAAATGATTGATGAGTGGG AAGCAGAAGTGCAACGCAAGGCTGGAATTCAAGCAGAAGAAGCTGCAGTT GATCGTCGTGCCAAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70415:73..987-

>mRNA_M-pyrifera_M_contig70415.16814.1 ID=mRNA_M-pyrifera_M_contig70415.16814.1|Name=mRNA_M-pyrifera_M_contig70415.16814.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1830bp|location=Sequence derived from alignment at M-pyrifera_M_contig70415:73..987- (Macrocystis pyrifera P11B4 male)
TCACCTTCTGCATCAGCAACATCCTCTTCCACTTCATCATCATCATCATC
ATCATCATCTTCTGCATTGGCACGTGCTGCATTGATGTGTGTTGCGACTT
TTTGTGCAGTGTCTCCTTCATTTGGTGAGGAAAATGTGCGTGTCGTTGTA
ACTGCTGCACGACGTGCTGCTGATCCCGTGACACGAAGTGCAGCTGCAGT
TGCACTGGGTGATCTTGCTTCTCGGCATCCAAATGTGGTGGAACCTTGGA
CGAAAGAGATGTATGCTGCGCTACGGGATCCAGATCCAAGCGTACGTGCT
GATGTATTGAGCGTATTGGGCCACTTGGCTTGTAACGACTTGATCAAGGT
ACGTGGTGGTGTTGGAGACTTGGCAGCATGTTTAGCAGATAGTCATCCCA
AAGTTGCTGCTCTCGCACGAGCATTCTTTGATGAATTTGCAAGGCGTGGG
GCCAGCAATCCAGTCTATGCATTCTTCCCAGATGCACTTTCCACACTGTC
ACGACCATCTGTCCTTGCACCTGCTGATTTCCGTCGTGTGATGCGATATC
TCTTGCAACTGATAAAGTCGCAACGGCATGGGGAAGCACTGGCAGAGCGA
GTTGCTCAACGTTTTGCAGCAGTTCCATTGGGGACTCCAGATGCAGAAAT
TACATGGAAAGCGTTGGCATTTTGCCTTGGCTTGTTACCTGTTGCTGAAA
AAGCAGCAAAGTCCCTTGCTGAACATATGGATTGGTACTCCCACGCACTT
GGGGATAGTGAAGTGGCAGATGCATTCATTTCTGCCATTGACAAAGCAAG
AAAGGCAGTTGCTGGAAAGCCATCATTGTTGCAAATGATTGATGAGTGGG
AAGCAGAAGTGCAACGCAAGGCTGGAATTCAAGCAGAAGAAGCTGCAGTT
GATCGTCGTGCCAAATCACCTTCTGCATCAGCAACATCCTCTTCCACTTC
ATCATCATCATCATCATCATCATCTTCTGCATTGGCACGTGCTGCATTGA
TGTGTGTTGCGACTTTTTGTGCAGTGTCTCCTTCATTTGGTGAGGAAAAT
GTGCGTGTCGTTGTAACTGCTGCACGACGTGCTGCTGATCCCGTGACACG
AAGTGCAGCTGCAGTTGCACTGGGTGATCTTGCTTCTCGGCATCCAAATG
TGGTGGAACCTTGGACGAAAGAGATGTATGCTGCGCTACGGGATCCAGAT
CCAAGCGTACGTGCTGATGTATTGAGCGTATTGGGCCACTTGGCTTGTAA
CGACTTGATCAAGGTACGTGGTGGTGTTGGAGACTTGGCAGCATGTTTAG
CAGATAGTCATCCCAAAGTTGCTGCTCTCGCACGAGCATTCTTTGATGAA
TTTGCAAGGCGTGGGGCCAGCAATCCAGTCTATGCATTCTTCCCAGATGC
ACTTTCCACACTGTCACGACCATCTGTCCTTGCACCTGCTGATTTCCGTC
GTGTGATGCGATATCTCTTGCAACTGATAAAGTCGCAACGGCATGGGGAA
GCACTGGCAGAGCGAGTTGCTCAACGTTTTGCAGCAGTTCCATTGGGGAC
TCCAGATGCAGAAATTACATGGAAAGCGTTGGCATTTTGCCTTGGCTTGT
TACCTGTTGCTGAAAAAGCAGCAAAGTCCCTTGCTGAACATATGGATTGG
TACTCCCACGCACTTGGGGATAGTGAAGTGGCAGATGCATTCATTTCTGC
CATTGACAAAGCAAGAAAGGCAGTTGCTGGAAAGCCATCATTGTTGCAAA
TGATTGATGAGTGGGAAGCAGAAGTGCAACGCAAGGCTGGAATTCAAGCA
GAAGAAGCTGCAGTTGATCGTCGTGCCAAA
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