prot_M-pyrifera_M_contig70118.16769.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70118.16769.1
Unique Nameprot_M-pyrifera_M_contig70118.16769.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length161
Homology
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A1S3UNM5_VIGRR (RecQ-mediated genome instability protein 1 n=3 Tax=Vigna TaxID=3913 RepID=A0A1S3UNM5_VIGRR)

HSP 1 Score: 118 bits (295), Expect = 7.860e-28
Identity = 74/159 (46.54%), Postives = 94/159 (59.12%), Query Frame = 0
Query:   11 LSRLGIMVNRDWLATAERVLKEKRVAARDLVDAV-----VEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 161
            L RLG+ + R WLA+  R L+    +   L  A      +EQFLFAD+N+ G   LP  VD MH   L G +VLQV E  N+  PL  R +        CLKL +TDG QRV G EY+ I AL+V  P G K+AI +V V+RG+LML P+T+ VLGG V
Sbjct:   68 LRRLGLSLKRGWLASCLRQLQVSVTSFEHLDVAAKAKLCLEQFLFADMNLCGAGVLPLGVDSMHLRVLPGPYVLQVDEIINITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCAPSGLKVAISNVHVRRGLLMLVPETIEVLGGLV 226          
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A8B9AZN0_PHODC (recQ-mediated genome instability protein 1-like n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AZN0_PHODC)

HSP 1 Score: 114 bits (284), Expect = 1.280e-27
Identity = 65/159 (40.88%), Postives = 88/159 (55.35%), Query Frame = 0
Query:   11 LSRLGIMVNRDWLATAERVLKEKRVAARDLVDA-----VVEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 161
            L RLG+ +  +WL    + L         L  A       EQFL +D+N+ G   LP++V  MH   L G FVLQV E  N+  PL  R  D       CLKL +TDG QR+ G EY+ I  L+V  P G+K+ I +V ++RG+LML P+ + VLGG+V
Sbjct:   99 LRRLGLRLRPEWLGFCVKALTSYGSGFEGLDIAGKARRCFEQFLLSDMNICGAGVLPENVQAMHKADLEGPFVLQVDEIINISAPLRERYHDAPAGFKRCLKLSMTDGVQRIFGMEYRPIRELEVLAPAGFKIIICNVHIRRGLLMLVPEVLEVLGGQV 257          
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A8B8KJY2_ABRPR (RecQ-mediated genome instability protein 1 n=2 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8KJY2_ABRPR)

HSP 1 Score: 117 bits (292), Expect = 2.170e-27
Identity = 74/166 (44.58%), Postives = 93/166 (56.02%), Query Frame = 0
Query:    4 GADTLSGLSRLGIMVNRDWLATAERVLKEKRVAARDLVDAV-----VEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 161
            G+   + L RLG+ + RDWLA+    L+        L  A       EQFLFAD+N  G   LP +VD MH   L G +VLQV E  N+  PL  R +        CLKL LTDG QRV G EY+ I AL+V    G K+AI +V V RG+LML P+T+ +LGG V
Sbjct:  198 GSPVANFLPRLGLALKRDWLASCLCELQASVTGFEGLDVAAKAKLCFEQFLFADMNFCGSGVLPPNVDSMHLSVLPGPYVLQVDEIINISCPLRSRYEQAPPGLKRCLKLSLTDGVQRVFGMEYRPIQALEVCASSGLKVAISNVRVHRGLLMLVPETIEILGGLV 363          
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A0L9TIT8_PHAAN (RecQ-mediated genome instability protein 1 n=4 Tax=Vigna TaxID=3913 RepID=A0A0L9TIT8_PHAAN)

HSP 1 Score: 115 bits (289), Expect = 5.480e-27
Identity = 73/159 (45.91%), Postives = 92/159 (57.86%), Query Frame = 0
Query:   11 LSRLGIMVNRDWLATAERVLKEKRVAARDLVDAV-----VEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 161
            L RLG+ + R WLA+  R L+    +   L  A       EQFLFAD+N+ G   LP  VD MH   L G +VLQV E  N+  PL  R +        CLKL +TDG QRV G EY+ I AL+V  P G K+AI +V V+RG+LML P+ + VLGG V
Sbjct:   66 LRRLGLSLKRGWLASCLRQLQVSVTSFEHLDVAAKAKRCFEQFLFADMNLCGAGVLPPAVDSMHLRVLPGPYVLQVDEIINITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCAPSGLKVAISNVHVRRGLLMLVPEVIEVLGGLV 224          
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A6P5GNC4_ANACO (RecQ-mediated genome instability protein 1 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GNC4_ANACO)

HSP 1 Score: 115 bits (288), Expect = 5.930e-27
Identity = 71/161 (44.10%), Postives = 93/161 (57.76%), Query Frame = 0
Query:   11 LSRLGIMVNRDWLATAERVL-------KEKRVAARDLVDAVVEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDT---SNTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 161
            L RLG+ + R+WL +    L       +   VAAR    +  EQFLFAD+N+ G   LP++V  MH   L G FVLQV E  N+   +  R +D    S  CLKL +TDG QRV G EY+ I  L+V  P G K+ I +V V+RG+LML P+ + VLGG V
Sbjct:  102 LGRLGLRLLREWLESCVAALAGPGSGFEAMDVAAR--ARSCFEQFLFADMNLCGGGVLPENVCGMHKAELEGPFVLQVDEIVNISASIRERYQDAPAGSKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPAGLKVVIRNVHVRRGLLMLVPEVLEVLGGVV 260          
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A1Q3CPV3_CEPFO (RecQ-mediated genome instability protein 1 (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CPV3_CEPFO)

HSP 1 Score: 114 bits (286), Expect = 1.110e-26
Identity = 74/168 (44.05%), Postives = 96/168 (57.14%), Query Frame = 0
Query:    5 ADTLSG--LSRLGIMVNRDWLATAERVLKEKRVAARDLVDAVV------EQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTSN---TCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 161
            ADTL G  L R+G+ + R+WL +    L ++ V      D+        EQFLF+D+N  G   LPQ+VD MH   L G FVLQV E  N+  PL  R +D  +    CLKL +TDG QRV G EY+ I  LKV  P G K+AI +V ++ G+LML P+   VL G V
Sbjct:   62 ADTLIGEFLGRVGLRLKREWLDSCVEGL-QRSVPGFSAFDSETKAKLCFEQFLFSDMNYSGAGVLPQNVDSMHLVDLKGPFVLQVDEIVNISCPLRGRYQDAPSGIKRCLKLSMTDGIQRVFGMEYRPIKDLKVLAPAGLKVAICNVHIRHGLLMLVPEAFEVLEGMV 228          
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A151RRF7_CAJCA (RecQ-mediated genome instability protein 1 n=3 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RRF7_CAJCA)

HSP 1 Score: 114 bits (286), Expect = 1.200e-26
Identity = 73/160 (45.62%), Postives = 92/160 (57.50%), Query Frame = 0
Query:   11 LSRLGIMVNRDWLATAERVLKEKRVAARDLVDAVV------EQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 161
            L RLG+ + RDWLA+    L+   VAA   +DA        E FLFAD+N  G   LP  VD MH   L G +VLQV E  N+  PL  R +        CLKL +TDG QRV G EY+ I AL+V    G K+ I +V V+RG+LML P+T+ +LGG V
Sbjct:   57 LRRLGLSLRRDWLASCLLQLQSS-VAAFQRLDAAAKAKLCFEHFLFADMNSCGAGVLPPDVDSMHLRLLPGPYVLQVDEVINICCPLRGRYEAAPAGLKRCLKLSMTDGVQRVFGMEYRPIKALEVCASSGSKVVISNVHVRRGLLMLVPETIVILGGLV 215          
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A1J7IY89_LUPAN (RecQ-mediated genome instability protein 1 n=4 Tax=Lupinus TaxID=3869 RepID=A0A1J7IY89_LUPAN)

HSP 1 Score: 114 bits (286), Expect = 1.360e-26
Identity = 72/162 (44.44%), Postives = 91/162 (56.17%), Query Frame = 0
Query:   11 LSRLGIMVNRDWLATAERVLKEKRVAARDLVDAVV--------EQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDT---SNTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 161
            L RLG+ + R+WL      L+E   A R      V        EQFLFAD+N  G   LP  VD MH  +L G +VLQV E  N+  PL  R       +  CLKL +TDG QRV G EY+ I AL+V  P G K+ I +V V+RG+LML P+T+ +LGG V
Sbjct:   81 LRRLGLGLKREWLRDC---LRELEFALRGFSGFDVTTKAKLCFEQFLFADMNFSGSGVLPPSVDSMHRAQLPGPYVLQVDEIVNITCPLRGRYNQAPPGAKRCLKLSMTDGIQRVFGMEYRPIQALEVCAPAGLKVVISNVHVRRGLLMLVPETIEILGGLV 239          
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: V7CRL1_PHAVU (RecQ-mediated genome instability protein 1 n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7CRL1_PHAVU)

HSP 1 Score: 114 bits (285), Expect = 1.650e-26
Identity = 71/159 (44.65%), Postives = 92/159 (57.86%), Query Frame = 0
Query:   11 LSRLGIMVNRDWLATAERVLKEKRVAARDL-----VDAVVEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 161
            L RLG+ + RDWLA+  R L+    +   L       +  EQ LFAD+N  G   LP +VD MH   L G +VLQV E  N+  PL  R +        CLKL +TDG QRV G EY+ I AL+V    G K+AI +V V+RG+LML P+T+ +LGG V
Sbjct:   69 LQRLGLSLKRDWLASCLRQLQASVTSFEHLDVATKAKSCFEQCLFADMNSCGAGILPPNVDSMHLRVLPGPYVLQVDEIVNITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCASSGLKVAISNVHVRRGLLMLVPETIEILGGLV 227          
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A5C7HC14_9ROSI (RecQ-mediated genome instability protein 1 n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HC14_9ROSI)

HSP 1 Score: 114 bits (284), Expect = 1.840e-26
Identity = 71/169 (42.01%), Postives = 100/169 (59.17%), Query Frame = 0
Query:    2 SVGADTLSGLSRLGIMVNRDWLATAERVLKEKRVAARDLVDAVV------EQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTSNT---CLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 161
            S G+     L  LG+ + RDWL +  + L E  V+    +D         +QFLF+D+N  G   LP++V+ MH   L G F+LQV E  N+G PL+ R +D  ++   CLKL +TDG QRV G EY+ I  L+V  P G K+AI +V ++ G+LML P+T+ VLGG V
Sbjct:   71 STGSPIGDFLLSLGLSLKRDWLNSCVQGL-ETSVSGFLHLDVSAKAKHCFQQFLFSDMNYSGAGVLPENVNSMHLVELKGPFILQVDEIVNIGCPLQGRYQDAPSSIKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPSGLKVAICNVHIRHGLLMLVPETLEVLGGMV 238          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1S3UNM5_VIGRR7.860e-2846.54RecQ-mediated genome instability protein 1 n=3 Tax... [more]
A0A8B9AZN0_PHODC1.280e-2740.88recQ-mediated genome instability protein 1-like n=... [more]
A0A8B8KJY2_ABRPR2.170e-2744.58RecQ-mediated genome instability protein 1 n=2 Tax... [more]
A0A0L9TIT8_PHAAN5.480e-2745.91RecQ-mediated genome instability protein 1 n=4 Tax... [more]
A0A6P5GNC4_ANACO5.930e-2744.10RecQ-mediated genome instability protein 1 n=2 Tax... [more]
A0A1Q3CPV3_CEPFO1.110e-2644.05RecQ-mediated genome instability protein 1 (Fragme... [more]
A0A151RRF7_CAJCA1.200e-2645.63RecQ-mediated genome instability protein 1 n=3 Tax... [more]
A0A1J7IY89_LUPAN1.360e-2644.44RecQ-mediated genome instability protein 1 n=4 Tax... [more]
V7CRL1_PHAVU1.650e-2644.65RecQ-mediated genome instability protein 1 n=1 Tax... [more]
A0A5C7HC14_9ROSI1.840e-2642.01RecQ-mediated genome instability protein 1 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033472RecQ mediated genome instability protein, DUF1767SMARTSM01161DUF1767_2coord: 8..96
e-value: 6.7E-8
score: 42.3
IPR042470RecQ mediated genome instability protein, N-terminal, subdomain 2GENE3D2.40.50.770coord: 91..161
e-value: 3.0E-18
score: 67.6
IPR013894RecQ mediated genome instability protein, N-terminalPFAMPF08585RMI1_Ncoord: 95..161
e-value: 1.0E-20
score: 74.5
coord: 14..91
e-value: 2.9E-8
score: 33.8
IPR039215RecQ-mediated genome instability protein 1PANTHERPTHR14790FAMILY NOT NAMEDcoord: 11..161
NoneNo IPR availablePANTHERPTHR14790:SF15RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1coord: 11..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70118contigM-pyrifera_M_contig70118:592..1189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70118.16769.1mRNA_M-pyrifera_M_contig70118.16769.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70118 592..1189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70118.16769.1 ID=prot_M-pyrifera_M_contig70118.16769.1|Name=mRNA_M-pyrifera_M_contig70118.16769.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp
MSVGADTLSGLSRLGIMVNRDWLATAERVLKEKRVAARDLVDAVVEQFLF
ADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTSN
TCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLC
PQTVCVLGGEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033472DUF1767
IPR042470RMI1_N_2
IPR013894RMI1_N
IPR039215RMI1