mRNA_M-pyrifera_M_contig70118.16769.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A1S3UNM5_VIGRR (RecQ-mediated genome instability protein 1 n=3 Tax=Vigna TaxID=3913 RepID=A0A1S3UNM5_VIGRR) HSP 1 Score: 118 bits (295), Expect = 7.860e-28 Identity = 74/159 (46.54%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 31 LSRLGIMVNRDWLATAERVLKEKRVAARDLVDAV-----VEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 483 L RLG+ + R WLA+ R L+ + L A +EQFLFAD+N+ G LP VD MH L G +VLQV E N+ PL R + CLKL +TDG QRV G EY+ I AL+V P G K+AI +V V+RG+LML P+T+ VLGG V Sbjct: 68 LRRLGLSLKRGWLASCLRQLQVSVTSFEHLDVAAKAKLCLEQFLFADMNLCGAGVLPLGVDSMHLRVLPGPYVLQVDEIINITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCAPSGLKVAISNVHVRRGLLMLVPETIEVLGGLV 226
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A8B9AZN0_PHODC (recQ-mediated genome instability protein 1-like n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AZN0_PHODC) HSP 1 Score: 114 bits (284), Expect = 1.280e-27 Identity = 65/159 (40.88%), Postives = 88/159 (55.35%), Query Frame = 1 Query: 31 LSRLGIMVNRDWLATAERVLKEKRVAARDLVDA-----VVEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 483 L RLG+ + +WL + L L A EQFL +D+N+ G LP++V MH L G FVLQV E N+ PL R D CLKL +TDG QR+ G EY+ I L+V P G+K+ I +V ++RG+LML P+ + VLGG+V Sbjct: 99 LRRLGLRLRPEWLGFCVKALTSYGSGFEGLDIAGKARRCFEQFLLSDMNICGAGVLPENVQAMHKADLEGPFVLQVDEIINISAPLRERYHDAPAGFKRCLKLSMTDGVQRIFGMEYRPIRELEVLAPAGFKIIICNVHIRRGLLMLVPEVLEVLGGQV 257
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A8B8KJY2_ABRPR (RecQ-mediated genome instability protein 1 n=2 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8KJY2_ABRPR) HSP 1 Score: 117 bits (292), Expect = 2.170e-27 Identity = 74/166 (44.58%), Postives = 93/166 (56.02%), Query Frame = 1 Query: 10 GADTLSGLSRLGIMVNRDWLATAERVLKEKRVAARDLVDAV-----VEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 483 G+ + L RLG+ + RDWLA+ L+ L A EQFLFAD+N G LP +VD MH L G +VLQV E N+ PL R + CLKL LTDG QRV G EY+ I AL+V G K+AI +V V RG+LML P+T+ +LGG V Sbjct: 198 GSPVANFLPRLGLALKRDWLASCLCELQASVTGFEGLDVAAKAKLCFEQFLFADMNFCGSGVLPPNVDSMHLSVLPGPYVLQVDEIINISCPLRSRYEQAPPGLKRCLKLSLTDGVQRVFGMEYRPIQALEVCASSGLKVAISNVRVHRGLLMLVPETIEILGGLV 363
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A0L9TIT8_PHAAN (RecQ-mediated genome instability protein 1 n=4 Tax=Vigna TaxID=3913 RepID=A0A0L9TIT8_PHAAN) HSP 1 Score: 115 bits (289), Expect = 5.480e-27 Identity = 73/159 (45.91%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 31 LSRLGIMVNRDWLATAERVLKEKRVAARDLVDAV-----VEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 483 L RLG+ + R WLA+ R L+ + L A EQFLFAD+N+ G LP VD MH L G +VLQV E N+ PL R + CLKL +TDG QRV G EY+ I AL+V P G K+AI +V V+RG+LML P+ + VLGG V Sbjct: 66 LRRLGLSLKRGWLASCLRQLQVSVTSFEHLDVAAKAKRCFEQFLFADMNLCGAGVLPPAVDSMHLRVLPGPYVLQVDEIINITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCAPSGLKVAISNVHVRRGLLMLVPEVIEVLGGLV 224
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A6P5GNC4_ANACO (RecQ-mediated genome instability protein 1 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GNC4_ANACO) HSP 1 Score: 115 bits (288), Expect = 5.930e-27 Identity = 71/161 (44.10%), Postives = 93/161 (57.76%), Query Frame = 1 Query: 31 LSRLGIMVNRDWLATAERVL-------KEKRVAARDLVDAVVEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDT---SNTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 483 L RLG+ + R+WL + L + VAAR + EQFLFAD+N+ G LP++V MH L G FVLQV E N+ + R +D S CLKL +TDG QRV G EY+ I L+V P G K+ I +V V+RG+LML P+ + VLGG V Sbjct: 102 LGRLGLRLLREWLESCVAALAGPGSGFEAMDVAAR--ARSCFEQFLFADMNLCGGGVLPENVCGMHKAELEGPFVLQVDEIVNISASIRERYQDAPAGSKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPAGLKVVIRNVHVRRGLLMLVPEVLEVLGGVV 260
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A1Q3CPV3_CEPFO (RecQ-mediated genome instability protein 1 (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CPV3_CEPFO) HSP 1 Score: 114 bits (286), Expect = 1.110e-26 Identity = 74/168 (44.05%), Postives = 96/168 (57.14%), Query Frame = 1 Query: 13 ADTLSG--LSRLGIMVNRDWLATAERVLKEKRVAARDLVDAVV------EQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTSN---TCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 483 ADTL G L R+G+ + R+WL + L ++ V D+ EQFLF+D+N G LPQ+VD MH L G FVLQV E N+ PL R +D + CLKL +TDG QRV G EY+ I LKV P G K+AI +V ++ G+LML P+ VL G V Sbjct: 62 ADTLIGEFLGRVGLRLKREWLDSCVEGL-QRSVPGFSAFDSETKAKLCFEQFLFSDMNYSGAGVLPQNVDSMHLVDLKGPFVLQVDEIVNISCPLRGRYQDAPSGIKRCLKLSMTDGIQRVFGMEYRPIKDLKVLAPAGLKVAICNVHIRHGLLMLVPEAFEVLEGMV 228
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A151RRF7_CAJCA (RecQ-mediated genome instability protein 1 n=3 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RRF7_CAJCA) HSP 1 Score: 114 bits (286), Expect = 1.200e-26 Identity = 73/160 (45.62%), Postives = 92/160 (57.50%), Query Frame = 1 Query: 31 LSRLGIMVNRDWLATAERVLKEKRVAARDLVDAVV------EQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 483 L RLG+ + RDWLA+ L+ VAA +DA E FLFAD+N G LP VD MH L G +VLQV E N+ PL R + CLKL +TDG QRV G EY+ I AL+V G K+ I +V V+RG+LML P+T+ +LGG V Sbjct: 57 LRRLGLSLRRDWLASCLLQLQSS-VAAFQRLDAAAKAKLCFEHFLFADMNSCGAGVLPPDVDSMHLRLLPGPYVLQVDEVINICCPLRGRYEAAPAGLKRCLKLSMTDGVQRVFGMEYRPIKALEVCASSGSKVVISNVHVRRGLLMLVPETIVILGGLV 215
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A1J7IY89_LUPAN (RecQ-mediated genome instability protein 1 n=4 Tax=Lupinus TaxID=3869 RepID=A0A1J7IY89_LUPAN) HSP 1 Score: 114 bits (286), Expect = 1.360e-26 Identity = 72/162 (44.44%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 31 LSRLGIMVNRDWLATAERVLKEKRVAARDLVDAVV--------EQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDT---SNTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 483 L RLG+ + R+WL L+E A R V EQFLFAD+N G LP VD MH +L G +VLQV E N+ PL R + CLKL +TDG QRV G EY+ I AL+V P G K+ I +V V+RG+LML P+T+ +LGG V Sbjct: 81 LRRLGLGLKREWLRDC---LRELEFALRGFSGFDVTTKAKLCFEQFLFADMNFSGSGVLPPSVDSMHRAQLPGPYVLQVDEIVNITCPLRGRYNQAPPGAKRCLKLSMTDGIQRVFGMEYRPIQALEVCAPAGLKVVISNVHVRRGLLMLVPETIEILGGLV 239
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: V7CRL1_PHAVU (RecQ-mediated genome instability protein 1 n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7CRL1_PHAVU) HSP 1 Score: 114 bits (285), Expect = 1.650e-26 Identity = 71/159 (44.65%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 31 LSRLGIMVNRDWLATAERVLKEKRVAARDL-----VDAVVEQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTS---NTCLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 483 L RLG+ + RDWLA+ R L+ + L + EQ LFAD+N G LP +VD MH L G +VLQV E N+ PL R + CLKL +TDG QRV G EY+ I AL+V G K+AI +V V+RG+LML P+T+ +LGG V Sbjct: 69 LQRLGLSLKRDWLASCLRQLQASVTSFEHLDVATKAKSCFEQCLFADMNSCGAGILPPNVDSMHLRVLPGPYVLQVDEIVNITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCASSGLKVAISNVHVRRGLLMLVPETIEILGGLV 227
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Match: A0A5C7HC14_9ROSI (RecQ-mediated genome instability protein 1 n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HC14_9ROSI) HSP 1 Score: 114 bits (284), Expect = 1.840e-26 Identity = 71/169 (42.01%), Postives = 100/169 (59.17%), Query Frame = 1 Query: 4 SVGADTLSGLSRLGIMVNRDWLATAERVLKEKRVAARDLVDAVV------EQFLFADLNVIGLKALPQHVDRMHDCRLTGSFVLQVQEAFNMGEPLERRNKDTSNT---CLKLWLTDGHQRVVGFEYKKIGALKVETPVGYKLAIHDVMVKRGVLMLCPQTVCVLGGEV 483 S G+ L LG+ + RDWL + + L E V+ +D +QFLF+D+N G LP++V+ MH L G F+LQV E N+G PL+ R +D ++ CLKL +TDG QRV G EY+ I L+V P G K+AI +V ++ G+LML P+T+ VLGG V Sbjct: 71 STGSPIGDFLLSLGLSLKRDWLNSCVQGL-ETSVSGFLHLDVSAKAKHCFQQFLFSDMNYSGAGVLPENVNSMHLVELKGPFILQVDEIVNIGCPLQGRYQDAPSSIKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPSGLKVAICNVHIRHGLLMLVPETLEVLGGMV 238 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70118.16769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70118.16769.1 >prot_M-pyrifera_M_contig70118.16769.1 ID=prot_M-pyrifera_M_contig70118.16769.1|Name=mRNA_M-pyrifera_M_contig70118.16769.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp MSVGADTLSGLSRLGIMVNRDWLATAERVLKEKRVAARDLVDAVVEQFLFback to top mRNA from alignment at M-pyrifera_M_contig70118:592..1189+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70118.16769.1 ID=mRNA_M-pyrifera_M_contig70118.16769.1|Name=mRNA_M-pyrifera_M_contig70118.16769.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=598bp|location=Sequence derived from alignment at M-pyrifera_M_contig70118:592..1189+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70118:592..1189+ >mRNA_M-pyrifera_M_contig70118.16769.1 ID=mRNA_M-pyrifera_M_contig70118.16769.1|Name=mRNA_M-pyrifera_M_contig70118.16769.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig70118:592..1189+ (Macrocystis pyrifera P11B4 male)back to top |